Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_5g24150 Fragaria vesca HOM05D000595 ORTHO05D004141 1.2e-48 196.1 90 100.0
FAN18G1127 Fragaria x ananassa HOM05D000595 ORTHO05D004141 1.2e-48 196.1 90 100.0
FAN13G2264 Fragaria x ananassa HOM05D000595 ORTHO05D004141 5.9e-48 193.7 89 100.0
RcHm_v2.0_Chr7g0213921 Rosa chinensis HOM05D000595 ORTHO05D004141 5.6e-46 187.2 88 94.3
RcHm_v2.0_Chr7g0213851 Rosa chinensis HOM05D000595 ORTHO05D004141 2.1e-45 185.3 88 92.0
Prupe.5G018900 Prunus persica HOM05D000595 ORTHO05D004141 3.7e-42 174.5 88 85.2
QL02p060306 Quercus lobata HOM05D000595 ORTHO05D004141 6.4e-42 173.7 88 84.1
QL02p060347 Quercus lobata HOM05D000595 ORTHO05D004141 2.0e-40 168.7 88 83.0
MD00G1148100 Malus domestica HOM05D000595 ORTHO05D004141 3.5e-40 167.9 88 80.7
Cfa012657 Carpinus fangiana HOM05D000595 ORTHO05D004141 3.0e-39 164.9 88 80.7
CiPaw.11G104000 Carya illinoinensis HOM05D000595 ORTHO05D004141 1.5e-38 162.5 88 76.1
COL.COLO4_24689 Corchorus olitorius HOM05D000595 ORTHO05D004141 1.5e-38 162.5 88 77.3
Haze_07993 Corylus avellana HOM05D000595 ORTHO05D004141 1.9e-38 162.2 88 78.4
Thecc.03G325300 Theobroma cacao HOM05D000595 ORTHO05D004141 1.9e-38 162.2 88 78.4
Manes.15G187301 Manihot esculenta HOM05D000595 ORTHO05D004141 2.5e-38 161.8 85 81.2
vmacro00078 Vaccinium macrocarpon HOM05D000595 ORTHO05D004141 3.3e-38 161.4 85 81.2
Ciclev10000404m.g Citrus clementina HOM05D000595 ORTHO05D004141 5.6e-38 160.6 88 79.5
TWI60G0525 Tripterygium wilfordii HOM05D000595 ORTHO05D004141 9.5e-38 159.8 85 80.0
Duzib116G0431 Durio zibethinus HOM05D000595 ORTHO05D004141 1.2e-37 159.5 85 78.8
Eucgr.E01212 Eucalyptus grandis HOM05D000595 ORTHO05D004141 2.8e-37 158.3 88 75.0
Thecc.05G000100 Theobroma cacao HOM05D000595 ORTHO05D004141 3.6e-37 157.9 85 81.2
CANSAT21G1418 Cannabis sativa HOM05D000595 ORTHO05D004141 4.7e-37 157.5 86 75.6
Dinv37419 Davidia involucrata HOM05D000595 ORTHO05D004141 4.7e-37 157.5 89 75.3
Ciclev10000152m.g Citrus clementina HOM05D000595 ORTHO05D004141 6.2e-37 157.1 88 78.4
CSS0032199 Camellia sinensis var. sinensis HOM05D000595 ORTHO05D004141 8.0e-37 156.8 85 80.0
GSVIVG01022815001 Vitis vinifera HOM05D000595 ORTHO05D004141 8.0e-37 156.8 86 76.7
Lj8A330G11 Lonicera japonica HOM05D000595 ORTHO05D004141 1.8e-36 155.6 85 75.3
Atru.chr6.1509 Acer truncatum HOM05D000595 ORTHO05D004141 6.8e-36 153.7 88 73.9
HanXRQChr17g0537211 Helianthus annuus HOM05D000595 ORTHO05D004141 6.8e-36 153.7 88 72.7
TAR629G2634 Trochodendron aralioides HOM05D000595 ORTHO05D004141 6.8e-36 153.7 86 73.3
Sabra01G0099900 Salix brachista HOM05D000595 ORTHO05D004141 8.9e-36 153.3 85 75.3
DCAR_004519 Daucus carota HOM05D000595 ORTHO05D004141 1.2e-35 152.9 86 76.7
arahy.Tifrunner.gnm1.ann1.BJDV4A Arachis hypogaea HOM05D000595 ORTHO05D004141 1.5e-35 152.5 88 71.6
arahy.Tifrunner.gnm1.ann1.NQH3GN Arachis hypogaea HOM05D000595 ORTHO05D004141 1.5e-35 152.5 88 71.6
Sc07g0008260 Simmondsia chinensis HOM05D000595 ORTHO05D004141 1.5e-35 152.5 85 78.8
Cpa.g.sc71.50 Carica papaya HOM05D000595 ORTHO05D004141 2.0e-35 152.1 84 78.6
Duzib116G0855 Durio zibethinus HOM05D000595 ORTHO05D004141 2.0e-35 152.1 85 75.3
Oeu042200.2 Olea europaea HOM05D000595 ORTHO05D004141 2.0e-35 152.1 85 75.3
Phvul.002G127000 Phaseolus vulgaris HOM05D000595 ORTHO05D004141 2.0e-35 152.1 88 70.5
Potri.001G129600 Populus trichocarpa HOM05D000595 ORTHO05D004141 2.0e-35 152.1 85 75.3
Aqoxy3G02180 Aquilegia oxysepala HOM05D000595 ORTHO05D004141 2.6e-35 151.8 86 72.1
VMungo1215G0102 Vigna mungo HOM05D000595 ORTHO05D004141 2.6e-35 151.8 88 71.6
Eucgr.E01209 Eucalyptus grandis HOM05D000595 ORTHO05D004141 3.4e-35 151.4 88 72.7
Oeu042195.1 Olea europaea HOM05D000595 ORTHO05D004141 3.4e-35 151.4 85 74.1
PSO782G2105 Papaver somniferum HOM05D000595 ORTHO05D004141 3.4e-35 151.4 86 69.8
Glyma.04G123900 Glycine max HOM05D000595 ORTHO05D004141 4.4e-35 151.0 88 71.6
Nn1g02038 Nelumbo nucifera HOM05D000595 ORTHO05D004141 4.4e-35 151.0 89 71.9
Nitab4.5_0000985g0070 Nicotiana tabacum HOM05D000595 ORTHO05D004141 4.4e-35 151.0 85 70.6
Actinidia32782 Actinidia chinensis HOM05D000595 ORTHO05D004141 5.8e-35 150.6 85 76.5
Carub.0003s2391 Capsella rubella HOM05D000595 ORTHO05D004141 7.5e-35 150.2 85 74.1
Cfa012656 Carpinus fangiana HOM05D000595 ORTHO05D004141 9.8e-35 149.8 88 73.9
ClCG10G000900 Citrullus lanatus HOM05D000595 ORTHO05D004141 9.8e-35 149.8 86 73.3
PGR042G2013 Punica granatum HOM05D000595 ORTHO05D004141 9.8e-35 149.8 87 71.3
A01p31400 Brassica napus HOM05D000595 ORTHO05D004141 1.3e-34 149.4 85 74.1
C01p39990 Brassica napus HOM05D000595 ORTHO05D004141 1.3e-34 149.4 85 74.1
AUR62007422 Chenopodium quinoa HOM05D000595 ORTHO05D004141 1.3e-34 149.4 85 76.5
Rhsim11G0034700 Rhododendron simsii HOM05D000595 ORTHO05D004141 1.3e-34 149.4 107 63.6
SalBow4G2071 Salvia bowleyana HOM05D000595 ORTHO05D004141 1.7e-34 149.1 88 71.6
Gohir.A02G091200 Gossypium hirsutum HOM05D000595 ORTHO05D004141 2.2e-34 148.7 85 75.3
ECA246G1180 Erigeron canadensis HOM05D000595 ORTHO05D004141 3.7e-34 147.9 85 72.9
Gohir.D02G109400 Gossypium hirsutum HOM05D000595 ORTHO05D004141 3.7e-34 147.9 85 75.3
Lalb_Chr16g0380651 Lupinus albus HOM05D000595 ORTHO05D004141 3.7e-34 147.9 88 68.2
Solyc08g075530.3 Solanum lycopersicum HOM05D000595 ORTHO05D004141 3.7e-34 147.9 85 71.8
Sopen08g024190 Solanum pennellii HOM05D000595 ORTHO05D004141 3.7e-34 147.9 85 71.8
Gorai.005G124100 Gossypium raimondii HOM05D000595 ORTHO05D004141 4.9e-34 147.5 85 74.1
Lalb_Chr09g0325191 Lupinus albus HOM05D000595 ORTHO05D004141 4.9e-34 147.5 88 69.3
AL3G38380 Arabidopsis lyrata HOM05D000595 ORTHO05D004141 6.4e-34 147.1 86 72.1
BcaB04g20429 Brassica carinata HOM05D000595 ORTHO05D004141 6.4e-34 147.1 85 74.1
Ca_25085_v3 Cicer arietinum L. HOM05D000595 ORTHO05D004141 6.4e-34 147.1 88 68.2
Thhalv10019990m.g Eutrema salsugineum HOM05D000595 ORTHO05D004141 8.3e-34 146.7 85 74.1
Nitab4.5_0000030g0360 Nicotiana tabacum HOM05D000595 ORTHO05D004141 8.3e-34 146.7 85 69.4
AUR62027310 Chenopodium quinoa HOM05D000595 ORTHO05D004141 1.1e-33 146.4 85 74.1
Hund14328 Selenicereus undatus HOM05D000595 ORTHO05D004141 1.1e-33 146.4 86 69.8
MELO3C013786.2 Cucumis melo HOM05D000595 ORTHO05D004141 1.4e-33 146.0 86 70.9
Sp3g21350 Schrenkiella parvula HOM05D000595 ORTHO05D004141 1.4e-33 146.0 85 72.9
THA.LOC104822230 Tarenaya hassleriana HOM05D000595 ORTHO05D004141 1.4e-33 146.0 87 73.6
Peaxi162Scf00053g00618 Petunia axillaris HOM05D000595 ORTHO05D004141 1.9e-33 145.6 85 68.2
CsaV3_3G000980 Cucumis sativus L. HOM05D000595 ORTHO05D004141 2.4e-33 145.2 86 70.9
TPR.G17247 Trifolium pratense HOM05D000595 ORTHO05D004141 3.2e-33 144.8 88 67.0
ECA246G0927 Erigeron canadensis HOM05D000595 ORTHO05D004141 4.1e-33 144.4 85 65.9
SGA_v2.0_scaffold111G31354 Striga asiatica HOM05D000595 ORTHO05D004141 4.1e-33 144.4 88 70.5
Lj2g0003822 Lotus japonicus HOM05D000595 ORTHO05D004141 5.4e-33 144.1 88 64.8
Sp3g21340 Schrenkiella parvula HOM05D000595 ORTHO05D004141 7.0e-33 143.7 85 72.9
MSTRG.24716 Avicennia marina HOM05D000595 ORTHO05D004141 9.2e-33 143.3 86 74.4
Carub.0003s2390 Capsella rubella HOM05D000595 ORTHO05D004141 9.2e-33 143.3 85 74.1
EL10Ac5g11905 Beta vulgaris HOM05D000595 ORTHO05D004141 1.2e-32 142.9 85 71.8
CARHR000110 Cardamine hirsuta HOM05D000595 ORTHO05D004141 1.2e-32 142.9 85 70.6
Migut.A00539 Erythranthe guttata HOM05D000595 ORTHO05D004141 1.6e-32 142.5 85 69.4
HPP92_020874 Vanilla planifolia HOM05D000595 ORTHO05D004141 1.6e-32 142.5 85 70.6
GSVIVG01036947001 Vitis vinifera HOM05D000595 ORTHO05D004141 1.6e-32 142.5 86 72.1
AT3G23640 Arabidopsis thaliana HOM05D000595 ORTHO05D004141 2.7e-32 141.7 85 69.4
Lsat_1_v5_gn_3_23561 Lactuca sativa HOM05D000595 ORTHO05D004141 2.7e-32 141.7 85 72.9
Psat2g142760 Pisum sativum HOM05D000595 ORTHO05D004141 6.0e-32 140.6 88 63.6
TPR.G39643 Trifolium pratense HOM05D000595 ORTHO05D004141 6.0e-32 140.6 88 65.9
PSO384G3519 Papaver somniferum HOM05D000595 ORTHO05D004141 1.7e-31 139.0 87 67.8
BcaB04g20430 Brassica carinata HOM05D000595 ORTHO05D004141 2.3e-31 138.7 85 68.2
Medtr5g026610 Medicago truncatula HOM05D000595 ORTHO05D004141 2.3e-31 138.7 88 63.6
Sed0017541 Sechium edule HOM05D000595 ORTHO05D004141 3.9e-31 137.9 88 63.6
PSO384G3949 Papaver somniferum HOM05D000595 ORTHO05D004141 5.1e-31 137.5 86 62.8
Zm00001eb096920 Zea mays HOM05D000595 ORTHO05D004141 5.1e-31 137.5 85 67.1
A01p31410 Brassica napus HOM05D000595 ORTHO05D004141 6.6e-31 137.1 86 67.4
Migut.E01361 Erythranthe guttata HOM05D000595 ORTHO05D004141 2.5e-30 135.2 88 67.0
TPR.G17274 Trifolium pratense HOM05D000595 ORTHO05D004141 2.5e-30 135.2 86 65.1
BraA01t03266Z Brassica rapa HOM05D000595 ORTHO05D004141 7.3e-30 133.7 85 67.1
ATR0829G165 Amborella trichopoda HOM05D000595 ORTHO05D004141 9.5e-30 133.3 85 67.1
Aa31LG10G5270 Aethionema arabicum HOM05D000595 ORTHO05D004141 1.6e-29 132.5 85 68.2
Zm00001eb305980 Zea mays HOM05D000595 ORTHO05D004141 1.6e-29 132.5 85 64.7
C01p40000 Brassica napus HOM05D000595 ORTHO05D004141 2.8e-29 131.7 86 66.3
BolC1t03957H Brassica oleracea HOM05D000595 ORTHO05D004141 3.6e-29 131.3 86 66.3
CAN.G1731.4 Capsicum annuum HOM05D000595 ORTHO05D004141 3.6e-29 131.3 82 65.9
Os07g0420700 Oryza sativa ssp. japonica HOM05D000595 ORTHO05D004141 4.7e-29 131.0 85 67.1
Psat2g142920 Pisum sativum HOM05D000595 ORTHO05D004141 6.2e-29 130.6 88 61.4
MBI04_g21145_MAGBIO Magnolia biondii HOM05D000595 ORTHO05D004141 1.1e-28 129.8 86 62.8
HPP92_024265 Vanilla planifolia HOM05D000595 ORTHO05D004141 1.1e-28 129.8 78 69.2
MBI04_g21144_MAGBIO Magnolia biondii HOM05D000595 ORTHO05D004141 1.4e-28 129.4 86 62.8
HPP92_028112 Vanilla planifolia HOM05D000595 ORTHO05D004141 5.2e-28 127.5 78 67.9
DCAR_004520 Daucus carota HOM05D000595 ORTHO05D004141 1.2e-27 126.3 86 62.8
CDE01G0028 Ceratophyllum demersum HOM05D000595 ORTHO05D004141 4.4e-27 124.4 86 65.1
Os07g0421300 Oryza sativa ssp. japonica HOM05D000595 ORTHO05D004141 1.1e-22 109.8 85 60.0
AagrBONN_evm.TU.Sc2ySwM_344.2687 Anthoceros agrestis HOM05D000595 ORTHO05D004141 2.8e-21 105.1 88 50.0
Pp3c16_2470 Physcomitrium patens HOM05D000595 ORTHO05D004141 2.8e-21 105.1 88 53.4
Pp3c4_24030 Physcomitrium patens HOM05D000595 ORTHO05D004141 3.6e-21 104.8 90 50.0
SMO116G0166 Selaginella moellendorffii HOM05D000595 ORTHO05D004141 4.7e-21 104.4 89 50.6
Pp3c3_9200 Physcomitrium patens HOM05D000595 ORTHO05D004141 5.2e-20 100.9 89 50.6
Mapoly0135s0001 Marchantia polymorpha HOM05D000595 ORTHO05D004141 6.8e-20 100.5 87 47.1
Mapoly0059s0108 Marchantia polymorpha HOM05D000595 ORTHO05D004141 2.0e-19 99.0 87 46.0
Pp3c5_4460 Physcomitrium patens HOM05D000595 ORTHO05D004141 2.0e-19 99.0 89 47.2
Pp3c13_11140 Physcomitrium patens HOM05D000595 ORTHO05D004141 3.4e-19 98.2 91 50.5
Ciclev10011016m.g Citrus clementina HOM05D000595 ORTHO05D004141 2.4e-17 92.0 53 75.5


User provided reference genes

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