Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_5g10770 Fragaria vesca HOM05D007467 ORTHO05D009441 1.1e-144 516.9 313 100.0
FAN18G0937 Fragaria x ananassa HOM05D007467 ORTHO05D009441 1.1e-144 516.9 313 100.0
FAN04G1879 Fragaria x ananassa HOM05D007467 ORTHO05D009441 3.7e-137 491.9 291 95.9
FAN08G2920 Fragaria x ananassa HOM05D007467 ORTHO05D009441 1.1e-136 490.3 291 97.3
FAN13G1608 Fragaria x ananassa HOM05D007467 ORTHO05D009441 3.1e-136 488.8 291 96.6
RcHm_v2.0_Chr7g0187371 Rosa chinensis HOM05D007467 ORTHO05D009441 8.2e-129 464.2 287 89.9
MD06G1120900 Malus domestica HOM05D007467 ORTHO05D009441 1.2e-87 327.4 332 63.9
Prupe.5G131500 Prunus persica HOM05D007467 ORTHO05D009441 8.6e-86 321.2 347 60.8
MD14G1137500 Malus domestica HOM05D007467 ORTHO05D009441 6.1e-84 315.1 330 57.0
Potri.001G082600 Populus trichocarpa HOM05D007467 ORTHO05D009441 1.5e-74 283.9 331 59.5
Duzib084G1076 Durio zibethinus HOM05D007467 ORTHO05D009441 4.9e-73 278.9 319 56.4
CSS0030138 Camellia sinensis var. sinensis HOM05D007467 ORTHO05D009441 8.3e-73 278.1 317 60.3
Sabra01G0059300 Salix brachista HOM05D007467 ORTHO05D009441 8.3e-73 278.1 333 58.3
QL02p027667 Quercus lobata HOM05D007467 ORTHO05D009441 1.4e-72 277.3 343 56.3
Thecc.03G219300 Theobroma cacao HOM05D007467 ORTHO05D009441 1.4e-72 277.3 326 58.9
Peaxi162Scf00074g00113 Petunia axillaris HOM05D007467 ORTHO05D009441 2.4e-72 276.6 312 59.9
CAN.G567.94 Capsicum annuum HOM05D007467 ORTHO05D009441 9.2e-72 274.6 297 62.6
Duzib205G1912 Durio zibethinus HOM05D007467 ORTHO05D009441 6.0e-71 271.9 329 58.7
Ciclev10020958m.g Citrus clementina HOM05D007467 ORTHO05D009441 1.7e-70 270.4 325 58.8
Sabra03G0107500 Salix brachista HOM05D007467 ORTHO05D009441 2.5e-69 266.5 323 57.3
Oeu013372.1 Olea europaea HOM05D007467 ORTHO05D009441 5.6e-69 265.4 313 60.7
Cfa011912 Carpinus fangiana HOM05D007467 ORTHO05D009441 1.6e-68 263.8 330 58.8
Gohir.D12G242100 Gossypium hirsutum HOM05D007467 ORTHO05D009441 1.5e-66 257.3 322 53.1
Gohir.A12G240800 Gossypium hirsutum HOM05D007467 ORTHO05D009441 2.0e-66 256.9 295 52.5
HanXRQChr07g0192371 Helianthus annuus HOM05D007467 ORTHO05D009441 4.4e-66 255.8 293 58.7
Atru.chr9.1852 Acer truncatum HOM05D007467 ORTHO05D009441 5.8e-66 255.4 328 57.0
Gorai.008G259400 Gossypium raimondii HOM05D007467 ORTHO05D009441 5.8e-66 255.4 292 52.4
Manes.02G001700 Manihot esculenta HOM05D007467 ORTHO05D009441 5.8e-66 255.4 307 52.8
DCAR_006558 Daucus carota HOM05D007467 ORTHO05D009441 4.9e-65 252.3 305 50.5
Haze_09186 Corylus avellana HOM05D007467 ORTHO05D009441 6.4e-65 251.9 328 56.1
PGSC0003DMG400012234 Solanum tuberosum HOM05D007467 ORTHO05D009441 1.9e-64 250.4 288 58.3
MSTRG.13707 Avicennia marina HOM05D007467 ORTHO05D009441 1.2e-63 247.7 318 57.5
Lsat_1_v5_gn_6_10100 Lactuca sativa HOM05D007467 ORTHO05D009441 6.6e-62 241.9 289 50.5
Nn1g00417 Nelumbo nucifera HOM05D007467 ORTHO05D009441 8.6e-62 241.5 318 48.4
Oeu042839.1 Olea europaea HOM05D007467 ORTHO05D009441 8.6e-62 241.5 313 57.2
CANSAT21G0614 Cannabis sativa HOM05D007467 ORTHO05D009441 2.5e-61 240.0 316 55.7
TAR629G1879 Trochodendron aralioides HOM05D007467 ORTHO05D009441 1.4e-59 234.2 299 57.5
Cc08_g16860 Coffea canephora HOM05D007467 ORTHO05D009441 7.6e-58 228.4 279 56.3
TAR636G1420 Trochodendron aralioides HOM05D007467 ORTHO05D009441 3.8e-57 226.1 275 48.7
ECA233G1457 Erigeron canadensis HOM05D007467 ORTHO05D009441 8.4e-57 224.9 289 56.4
Aqoxy7G00009 Aquilegia oxysepala HOM05D007467 ORTHO05D009441 2.4e-56 223.4 289 56.7
TWI60G0745 Tripterygium wilfordii HOM05D007467 ORTHO05D009441 2.4e-56 223.4 354 50.6
CiPaw.11G111200 Carya illinoinensis HOM05D007467 ORTHO05D009441 4.2e-56 222.6 224 68.8
COL.COLO4_10812 Corchorus olitorius HOM05D007467 ORTHO05D009441 1.7e-54 217.2 226 56.6
Dinv18747 Davidia involucrata HOM05D007467 ORTHO05D009441 2.3e-54 216.9 258 59.7
Hma1.2p1_0456F.1_g156740 Hydrangea macrophylla HOM05D007467 ORTHO05D009441 3.0e-54 216.5 291 54.6
Rhsim02G0253000 Rhododendron simsii HOM05D007467 ORTHO05D009441 6.6e-54 215.3 266 60.5
GSVIVG01019666001 Vitis vinifera HOM05D007467 ORTHO05D009441 1.5e-53 214.2 224 67.4
vmacro11497 Vaccinium macrocarpon HOM05D007467 ORTHO05D009441 2.5e-53 213.4 253 60.1
TWI15G0957 Tripterygium wilfordii HOM05D007467 ORTHO05D009441 3.3e-53 213.0 362 43.9
Lj2P155T22 Lonicera japonica HOM05D007467 ORTHO05D009441 5.6e-53 212.2 291 56.7
Solyc08g083220.1 Solanum lycopersicum HOM05D007467 ORTHO05D009441 1.4e-51 207.6 282 54.6
Eucgr.E01052 Eucalyptus grandis HOM05D007467 ORTHO05D009441 9.0e-51 204.9 370 49.2
Sopen08g031410 Solanum pennellii HOM05D007467 ORTHO05D009441 1.5e-50 204.1 283 55.1
PGR042G1595 Punica granatum HOM05D007467 ORTHO05D009441 2.6e-50 203.4 317 52.1
Nn3g18852 Nelumbo nucifera HOM05D007467 ORTHO05D009441 9.9e-50 201.4 291 52.2
Nitab4.5_0008141g0040 Nicotiana tabacum HOM05D007467 ORTHO05D009441 1.3e-49 201.1 243 60.9
Potri.003G147900 Populus trichocarpa HOM05D007467 ORTHO05D009441 2.9e-49 199.9 261 58.2
Gohir.A09G188250 Gossypium hirsutum HOM05D007467 ORTHO05D009441 4.9e-49 199.1 278 55.0
Nitab4.5_0002720g0040 Nicotiana tabacum HOM05D007467 ORTHO05D009441 4.9e-49 199.1 243 60.5
Gorai.006G205400 Gossypium raimondii HOM05D007467 ORTHO05D009441 1.0e-46 191.4 280 53.6
Gohir.D09G183100 Gossypium hirsutum HOM05D007467 ORTHO05D009441 3.0e-46 189.9 280 53.2
Aa31LG2G1740 Aethionema arabicum HOM05D007467 ORTHO05D009441 3.4e-42 176.4 288 49.3
Sed0003485 Sechium edule HOM05D007467 ORTHO05D009441 2.9e-41 173.3 298 49.7
MBI04_g15581_MAGBIO Magnolia biondii HOM05D007467 ORTHO05D009441 5.4e-40 169.1 239 45.6
MBI04_g43054_MAGBIO Magnolia biondii HOM05D007467 ORTHO05D009441 4.6e-39 166.0 215 45.6
SGA_v2.0_scaffold267G46175 Striga asiatica HOM05D007467 ORTHO05D009441 2.3e-38 163.7 273 47.6
BcaC04g22507 Brassica carinata HOM05D007467 ORTHO05D009441 3.9e-38 162.9 289 43.9
MELO3C005789.2 Cucumis melo HOM05D007467 ORTHO05D009441 1.9e-37 160.6 316 44.9
CARHR046220 Cardamine hirsuta HOM05D007467 ORTHO05D009441 2.5e-37 160.2 292 39.0
ClCG01G001480 Citrullus lanatus HOM05D007467 ORTHO05D009441 5.6e-37 159.1 251 53.8
MBI12_g21574_MAGBIO Magnolia biondii HOM05D007467 ORTHO05D009441 7.4e-37 158.7 281 49.1
PSO478G5135 Papaver somniferum HOM05D007467 ORTHO05D009441 1.1e-35 154.8 303 42.6
CsaV3_5G001620 Cucumis sativus L. HOM05D007467 ORTHO05D009441 5.3e-35 152.5 321 45.8
PSO782G5165 Papaver somniferum HOM05D007467 ORTHO05D009441 5.3e-35 152.5 294 44.9
Thhalv10023631m.g Eutrema salsugineum HOM05D007467 ORTHO05D009441 1.7e-33 147.5 281 38.1
Sp2g00870 Schrenkiella parvula HOM05D007467 ORTHO05D009441 6.4e-33 145.6 284 45.1
THA.LOC104823626 Tarenaya hassleriana HOM05D007467 ORTHO05D009441 1.4e-32 144.4 281 42.3
Carub.0002s0004 Capsella rubella HOM05D007467 ORTHO05D009441 2.5e-32 143.7 286 44.1
A09p15270 Brassica napus HOM05D007467 ORTHO05D009441 3.2e-32 143.3 288 41.7
BraA09t37173Z Brassica rapa HOM05D007467 ORTHO05D009441 3.2e-32 143.3 288 41.7
C09p18550 Brassica napus HOM05D007467 ORTHO05D009441 1.2e-31 141.4 289 40.8
BolC9t54751H Brassica oleracea HOM05D007467 ORTHO05D009441 1.2e-31 141.4 289 40.8
Oeu022032.1 Olea europaea HOM05D007467 ORTHO05D009441 1.3e-28 131.3 155 51.6
BcaB07g31413 Brassica carinata HOM05D007467 ORTHO05D009441 6.9e-27 125.6 287 41.1
AT1G64690 Arabidopsis thaliana HOM05D007467 ORTHO05D009441 1.1e-24 118.2 286 42.0
AUR62007067 Chenopodium quinoa HOM05D007467 ORTHO05D009441 4.2e-24 116.3 242 36.0
AUR62019932 Chenopodium quinoa HOM05D007467 ORTHO05D009441 9.3e-24 115.2 254 37.4
AL2G10070 Arabidopsis lyrata HOM05D007467 ORTHO05D009441 2.1e-23 114.0 285 40.4
Zm00001eb023700 Zea mays HOM05D007467 ORTHO05D009441 2.1e-23 114.0 286 39.2
CDE02G3312 Ceratophyllum demersum HOM05D007467 ORTHO05D009441 2.7e-23 113.6 294 34.4
PGSC0003DMG400013732 Solanum tuberosum HOM05D007467 ORTHO05D009441 3.5e-23 113.2 140 50.0
EL10Ac5g12411 Beta vulgaris HOM05D007467 ORTHO05D009441 1.1e-19 101.7 194 39.2
Actinidia22211 Actinidia chinensis HOM05D007467 ORTHO05D009441 1.5e-18 97.8 69 69.6
ATR0579G156 Amborella trichopoda HOM05D007467 ORTHO05D009441 3.2e-16 90.1 275 30.5
Ah.12g053280 Amaranthus hybridus HOM05D007467 ORTHO05D009441 9.4e-16 88.6 312 32.1
ClCG00G001110 Citrullus lanatus HOM05D007467 ORTHO05D009441 1.8e-14 84.3 146 54.8
Os10g0562600 Oryza sativa ssp. japonica HOM05D007467 ORTHO05D009441 5.1e-14 82.8 203 37.9
CDE11G0649 Ceratophyllum demersum HOM05D007467 ORTHO05D009441 1.7e-09 67.8 156 33.3
BcaB07g31547 Brassica carinata HOM05D007467 ORTHO05D009441 3.2e-08 63.5 154 34.4
COL.COLO4_31764 Corchorus olitorius HOM05D007467 ORTHO05D009441 3.6e-07 60.1 179 31.8
MBI02_g24810_MAGBIO Magnolia biondii HOM05D002166 ORTHO05D002634 6.1e-07 59.3 65 44.6
Dinv40752 Davidia involucrata HOM05D002166 ORTHO05D002634 1.0e-06 58.5 109 38.5
RhsimUnG0250700 Rhododendron simsii HOM05D002166 ORTHO05D002634 2.3e-06 57.4 79 41.8
TAR629G0586 Trochodendron aralioides HOM05D002166 ORTHO05D002634 2.3e-06 57.4 123 36.6
Sed0003279 Sechium edule HOM05D002166 ORTHO05D002634 3.0e-06 57.0 238 27.3
Ciclev10007979m.g Citrus clementina HOM05D002166 ORTHO05D002634 3.9e-06 56.6 64 42.2
arahy.Tifrunner.gnm1.ann1.2WUV3V Arachis hypogaea HOM05D002166 ORTHO05D002634 5.1e-06 56.2 137 46.7
arahy.Tifrunner.gnm1.ann1.MVDX5J Arachis hypogaea HOM05D002166 ORTHO05D002634 5.1e-06 56.2 137 46.7
Prupe.4G021500 Prunus persica HOM05D002166 ORTHO05D002634 5.1e-06 56.2 55 47.3
SEGI_05627 Sequoiadendron giganteum HOM05D002166 ORTHO05D002634 6.7e-06 55.8 88 39.8
CSS0020014 Camellia sinensis var. sinensis HOM05D002166 ORTHO05D002634 8.8e-06 55.5 52 51.9
Sed0003496 Sechium edule HOM05D002166 ORTHO05D002634 8.8e-06 55.5 283 25.1


User provided reference genes

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