Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN18G0890 Fragaria x ananassa HOM05D005348 ORTHO05D006635 0.0e+00 1308.1 662 100.0
FAN13G3003 Fragaria x ananassa HOM05D005348 ORTHO05D006635 0.0e+00 1180.2 739 84.2
FvH4_5g28890 Fragaria vesca HOM05D005348 ORTHO05D006635 0.0e+00 1179.5 699 88.4
RcHm_v2.0_Chr4g0410761 Rosa chinensis HOM05D005348 ORTHO05D006635 6.7e-290 1000.3 684 78.5
Prupe.5G092400 Prunus persica HOM05D005348 ORTHO05D006635 2.8e-280 968.4 697 72.5
FAN18G1071 Fragaria x ananassa HOM05D005348 ORTHO05D006635 1.6e-275 952.6 591 82.4
MD04G1066100 Malus domestica HOM05D005348 ORTHO05D006635 4.0e-266 921.4 696 70.3
QL12p017446 Quercus lobata HOM05D005348 ORTHO05D006635 5.2e-258 894.4 703 65.9
RcHm_v2.0_Chr7g0199071 Rosa chinensis HOM05D005348 ORTHO05D006635 1.7e-248 862.8 677 71.2
Actinidia05223 Actinidia chinensis HOM05D005348 ORTHO05D006635 1.2e-241 840.1 688 63.7
CANSAT21G2165 Cannabis sativa HOM05D005348 ORTHO05D006635 4.4e-241 838.2 695 63.7
Haze_08938 Corylus avellana HOM05D005348 ORTHO05D006635 7.5e-241 837.4 674 65.0
Thecc.03G272300 Theobroma cacao HOM05D005348 ORTHO05D006635 3.7e-240 835.1 610 69.3
vmacro13927 Vaccinium macrocarpon HOM05D005348 ORTHO05D006635 6.4e-240 834.3 744 59.4
PGR031G1121 Punica granatum HOM05D005348 ORTHO05D006635 1.4e-239 833.2 710 62.5
GSVIVG01019819001 Vitis vinifera HOM05D005348 ORTHO05D006635 1.3e-237 826.6 778 59.1
Psat2g181800 Pisum sativum HOM05D005348 ORTHO05D006635 5.1e-237 824.7 703 60.2
CSS0016729 Camellia sinensis var. sinensis HOM05D005348 ORTHO05D006635 1.1e-236 823.5 678 61.9
Eucgr.D01915 Eucalyptus grandis HOM05D005348 ORTHO05D006635 2.5e-236 822.4 694 62.1
Duzib068G0163 Durio zibethinus HOM05D005348 ORTHO05D006635 7.3e-236 820.8 701 61.3
TPR.G6715 Trifolium pratense HOM05D005348 ORTHO05D006635 8.1e-235 817.4 702 61.3
Phvul.002G154300 Phaseolus vulgaris HOM05D005348 ORTHO05D006635 1.4e-234 816.6 680 61.2
TAR375G0646 Trochodendron aralioides HOM05D005348 ORTHO05D006635 1.4e-234 816.6 696 62.9
Medtr5g010740 Medicago truncatula HOM05D005348 ORTHO05D006635 3.1e-234 815.5 625 65.8
CiPaw.11G140300 Carya illinoinensis HOM05D005348 ORTHO05D006635 5.2e-234 814.7 742 58.9
Migut.E01288 Erythranthe guttata HOM05D005348 ORTHO05D006635 1.5e-233 813.1 672 62.5
Lj2g0017844 Lotus japonicus HOM05D005348 ORTHO05D006635 2.0e-233 812.8 671 61.1
Sabra01G0082300 Salix brachista HOM05D005348 ORTHO05D006635 2.9e-232 808.9 737 58.6
Gorai.007G022400 Gossypium raimondii HOM05D005348 ORTHO05D006635 9.2e-231 803.9 705 60.3
Lalb_Chr16g0377191 Lupinus albus HOM05D005348 ORTHO05D006635 9.2e-231 803.9 676 61.2
Dinv39001 Davidia involucrata HOM05D005348 ORTHO05D006635 3.9e-229 798.5 700 61.4
Manes.02G025740 Manihot esculenta HOM05D005348 ORTHO05D006635 3.3e-228 795.4 686 63.3
ClCG01G003080 Citrullus lanatus HOM05D005348 ORTHO05D006635 9.5e-228 793.9 693 60.8
Sc05g0000210 Simmondsia chinensis HOM05D005348 ORTHO05D006635 1.6e-227 793.1 679 61.0
CAN.G981.21 Capsicum annuum HOM05D005348 ORTHO05D006635 1.1e-226 790.4 741 56.1
Sopen08g028770 Solanum pennellii HOM05D005348 ORTHO05D006635 1.4e-226 790.0 743 56.1
Aqoxy7G00422 Aquilegia oxysepala HOM05D005348 ORTHO05D006635 3.8e-224 781.9 677 60.3
PSO782G2170 Papaver somniferum HOM05D005348 ORTHO05D006635 6.4e-224 781.2 687 60.3
Sed0022971 Sechium edule HOM05D005348 ORTHO05D006635 6.4e-224 781.2 663 62.6
arahy.Tifrunner.gnm1.ann1.C7APUF Arachis hypogaea HOM05D005348 ORTHO05D006635 2.1e-222 776.2 653 62.2
PSO478G3496 Papaver somniferum HOM05D005348 ORTHO05D006635 2.1e-222 776.2 683 60.9
arahy.Tifrunner.gnm1.ann1.SKE7H3 Arachis hypogaea HOM05D005348 ORTHO05D006635 1.7e-221 773.1 653 60.8
SGA_v2.0_scaffold144G35970 Striga asiatica HOM05D005348 ORTHO05D006635 1.7e-221 773.1 646 61.6
SalBow1G6288 Salvia bowleyana HOM05D005348 ORTHO05D006635 3.3e-220 768.8 669 59.8
Cc08_g14090 Coffea canephora HOM05D005348 ORTHO05D006635 1.1e-218 763.8 769 54.1
THA.LOC104813014 Tarenaya hassleriana HOM05D005348 ORTHO05D006635 4.0e-218 761.9 606 63.4
SHI23548 Sapria himalayana HOM05D005348 ORTHO05D006635 5.3e-218 761.5 688 59.3
Carub.0006s3081 Capsella rubella HOM05D005348 ORTHO05D006635 2.6e-217 759.2 692 57.5
AL6G46446 Arabidopsis lyrata HOM05D005348 ORTHO05D006635 5.8e-217 758.1 690 59.1
AT4G11720 Arabidopsis thaliana HOM05D005348 ORTHO05D006635 1.4e-215 753.4 582 64.8
DCAR_006756 Daucus carota HOM05D005348 ORTHO05D006635 1.9e-215 753.1 684 61.0
EL10Ac4g10111 Beta vulgaris HOM05D005348 ORTHO05D006635 5.4e-215 751.5 709 56.8
FvH4_5g01650 Fragaria vesca HOM05D005348 ORTHO05D006635 2.7e-214 749.2 519 76.9
AL6G46320 Arabidopsis lyrata HOM05D005348 ORTHO05D006635 1.3e-213 746.9 695 58.3
CARHR254650 Cardamine hirsuta HOM05D005348 ORTHO05D006635 1.9e-212 743.0 594 62.5
Sp6g05730 Schrenkiella parvula HOM05D005348 ORTHO05D006635 2.5e-212 742.7 607 62.4
Aa31LG9G10660 Aethionema arabicum HOM05D005348 ORTHO05D006635 5.6e-212 741.5 688 57.0
BraA09t38310Z Brassica rapa HOM05D005348 ORTHO05D006635 4.8e-211 738.4 609 61.6
Rhsim07G0093800 Rhododendron simsii HOM05D005348 ORTHO05D006635 6.9e-210 734.6 835 51.0
A09p27390 Brassica napus HOM05D005348 ORTHO05D006635 3.4e-209 732.3 588 63.1
BolC9t56320H Brassica oleracea HOM05D005348 ORTHO05D006635 1.3e-208 730.3 635 59.7
BcaB01g01675 Brassica carinata HOM05D005348 ORTHO05D006635 4.9e-208 728.4 672 57.7
C09p34740 Brassica napus HOM05D005348 ORTHO05D006635 1.9e-207 726.5 598 62.5
Ciclev10019148m.g Citrus clementina HOM05D005348 ORTHO05D006635 3.2e-207 725.7 682 57.6
TWI15G0275 Tripterygium wilfordii HOM05D005348 ORTHO05D006635 9.3e-207 724.2 626 59.9
Ah.06g194640 Amaranthus hybridus HOM05D005348 ORTHO05D006635 4.6e-206 721.8 601 59.7
Lsat_1_v5_gn_3_5380 Lactuca sativa HOM05D005348 ORTHO05D006635 5.6e-204 714.9 601 59.6
Nn6g34225 Nelumbo nucifera HOM05D005348 ORTHO05D006635 6.2e-203 711.4 979 43.6
BcaB05g23815 Brassica carinata HOM05D005348 ORTHO05D006635 1.1e-202 710.7 601 60.2
ECA240G2378 Erigeron canadensis HOM05D005348 ORTHO05D006635 4.9e-200 701.8 600 59.7
Nitab4.5_0002234g0010 Nicotiana tabacum HOM05D005348 ORTHO05D006635 7.9e-198 694.5 735 51.7
CsaV3_5G003200 Cucumis sativus L. HOM05D005348 ORTHO05D006635 3.0e-197 692.6 512 68.2
Potri.001G109000 Populus trichocarpa HOM05D005348 ORTHO05D006635 1.1e-196 690.6 526 66.5
MBI04_g31975_MAGBIO Magnolia biondii HOM05D005348 ORTHO05D006635 2.1e-195 686.4 622 58.5
Atru.chr9.1551 Acer truncatum HOM05D005348 ORTHO05D006635 3.1e-194 682.6 513 66.9
MELO3C005635.2 Cucumis melo HOM05D005348 ORTHO05D006635 6.9e-194 681.4 549 64.5
Glyma.15G240000 Glycine max HOM05D005348 ORTHO05D006635 6.9e-194 681.4 527 65.7
Glyma.11G026100 Glycine max HOM05D005348 ORTHO05D006635 1.7e-192 676.8 527 65.3
Manes.01G066000 Manihot esculenta HOM05D005348 ORTHO05D006635 3.8e-192 675.6 551 62.8
Thhalv10028515m.g Eutrema salsugineum HOM05D005348 ORTHO05D006635 1.9e-188 663.3 553 60.9
AUR62037708 Chenopodium quinoa HOM05D005348 ORTHO05D006635 2.6e-185 652.9 499 63.9
Gohir.D11G021100 Gossypium hirsutum HOM05D005348 ORTHO05D006635 3.0e-181 639.4 507 62.9
COL.COLO4_05261 Corchorus olitorius HOM05D005348 ORTHO05D006635 6.3e-179 631.7 658 54.6
Glyma.09G081600 Glycine max HOM05D005348 ORTHO05D006635 1.4e-178 630.6 482 65.1
Gohir.A11G021400 Gossypium hirsutum HOM05D005348 ORTHO05D006635 1.7e-176 623.6 433 69.5
Peaxi162Scf00714g00430 Petunia axillaris HOM05D005348 ORTHO05D006635 9.4e-175 617.8 496 64.5
AUR62000200 Chenopodium quinoa HOM05D005348 ORTHO05D006635 1.5e-169 600.5 501 60.5
Solyc08g080450.3 Solanum lycopersicum HOM05D005348 ORTHO05D006635 1.4e-167 594.0 562 56.4
Nitab4.5_0002853g0050 Nicotiana tabacum HOM05D005348 ORTHO05D006635 1.3e-163 580.9 685 49.8
AUR62006548 Chenopodium quinoa HOM05D005348 ORTHO05D006635 1.1e-162 577.8 510 57.3
unitig_26.g9696 Utricularia gibba HOM05D005348 ORTHO05D006635 9.1e-162 574.7 638 50.0
Os05g0269500 Oryza sativa ssp. japonica HOM05D005348 ORTHO05D006635 4.2e-159 565.8 604 51.7
Os09g0525700 Oryza sativa ssp. japonica HOM05D005348 ORTHO05D006635 8.3e-147 525.0 589 49.7
Ca_06657_v3 Cicer arietinum L. HOM05D005348 ORTHO05D006635 7.7e-145 518.5 661 48.1
VMungo1215G1946 Vigna mungo HOM05D005348 ORTHO05D006635 1.3e-139 501.1 435 60.9
FAN04G2632 Fragaria x ananassa HOM05D005348 ORTHO05D006635 3.3e-135 486.5 671 48.1
Lj8C237T7 Lonicera japonica HOM05D005348 ORTHO05D006635 2.0e-132 477.2 352 67.3
HPP92_004952 Vanilla planifolia HOM05D005348 ORTHO05D006635 1.1e-130 471.5 670 41.8
Cpa.g.sc29.190 Carica papaya HOM05D005348 ORTHO05D006635 9.0e-101 372.1 316 63.6
FAN04G3017 Fragaria x ananassa HOM05D005348 ORTHO05D006635 2.2e-99 367.5 244 81.6
AUR62000197 Chenopodium quinoa HOM05D005348 ORTHO05D006635 5.3e-93 346.3 336 53.6
Hund02677 Selenicereus undatus HOM05D005348 ORTHO05D006635 1.2e-92 345.1 247 71.3
Zm00001eb103180 Zea mays HOM05D005348 ORTHO05D006635 9.3e-90 335.5 376 50.5
Glyma.09G081420 Glycine max HOM05D005348 ORTHO05D006635 8.7e-88 328.9 274 65.3
Prupe.8G039400 Prunus persica HOM05D005348 ORTHO05D006635 2.1e-86 324.3 268 62.3
ATR0757G099 Amborella trichopoda HOM05D005348 ORTHO05D006635 8.2e-78 295.8 209 67.0
Hund02678 Selenicereus undatus HOM05D005348 ORTHO05D006635 1.7e-75 288.1 291 52.2
VMungo1215G1628 Vigna mungo HOM05D005348 ORTHO05D006635 4.3e-71 273.5 245 55.1
Prupe.8G039500 Prunus persica HOM05D005348 ORTHO05D006635 5.3e-69 266.5 288 53.5
FAN08G1421 Fragaria x ananassa HOM05D005348 ORTHO05D006635 1.0e-64 252.3 134 97.0
Glyma.09G081380 Glycine max HOM05D005348 ORTHO05D006635 2.6e-52 211.1 204 50.0
Peaxi162Scf00714g00422 Petunia axillaris HOM05D005348 ORTHO05D006635 5.5e-50 203.4 201 51.7
FAN08G1570 Fragaria x ananassa HOM05D005348 ORTHO05D006635 7.2e-50 203.0 166 69.9
MSTRG.13824 Avicennia marina HOM05D005348 ORTHO05D006635 4.4e-47 193.7 199 50.8
FAN13G0849 Fragaria x ananassa HOM05D005348 ORTHO05D006635 9.7e-47 192.6 198 60.1
FAN08G2219 Fragaria x ananassa HOM05D005348 ORTHO05D006635 2.0e-44 184.9 170 62.9
MBI04_g31964_MAGBIO Magnolia biondii HOM05D005348 ORTHO05D006635 1.8e-37 161.8 164 56.7
CBR_g19301 Chara braunii HOM05D005348 ORTHO05D006635 2.6e-31 141.4 568 25.0
PGSC0003DMG400003049 Solanum tuberosum HOM05D005348 ORTHO05D006635 4.9e-30 137.1 165 47.3
Gohir.D11G021150 Gossypium hirsutum HOM05D005348 ORTHO05D006635 2.4e-29 134.8 129 59.7
Pp3c25_15230 Physcomitrium patens HOM05D005348 ORTHO05D006635 4.5e-28 130.6 271 30.3
Glyma.11G026250 Glycine max HOM05D005348 ORTHO05D006635 5.9e-28 130.2 91 73.6
ATR0757G119 Amborella trichopoda HOM05D005348 ORTHO05D006635 6.6e-27 126.7 78 66.7
Lj8A237G27 Lonicera japonica HOM05D005348 ORTHO05D006635 4.3e-26 124.0 85 75.3
Cre16.g674852 Chlamydomonas reinhardtii HOM05D005348 ORTHO05D006635 1.0e-24 119.4 385 29.4
Glyma.01G216933 Glycine max HOM05D005348 ORTHO05D006635 8.9e-24 116.3 104 57.7
Glyma.11G176306 Glycine max HOM05D005348 ORTHO05D006635 1.2e-23 115.9 91 61.5
FvH4_5g01630 Fragaria vesca HOM05D005348 ORTHO05D006635 1.1e-21 109.4 63 85.7
Mapoly0066s0032 Marchantia polymorpha HOM05D005348 ORTHO05D006635 2.4e-21 108.2 685 21.8
HanXRQChr02g0035411 Helianthus annuus HOM05D005348 ORTHO05D006635 1.4e-13 82.4 84 47.6
Mapoly0035s0066 Marchantia polymorpha HOM05D005348 ORTHO05D006635 1.3e-11 75.9 642 22.4
CsaV3_6G021380 Cucumis sativus L. HOM05D005348 ORTHO05D006635 2.8e-09 68.2 111 39.6


User provided reference genes

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