Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN18G0694 Fragaria x ananassa HOM05D000987 ORTHO05D046671 7.0e-72 273.9 140 100.0
FvH4_1g24050 Fragaria vesca HOM05D000987 ORTHO05D000831 7.1e-40 167.5 86 100.0
FAN19G0679 Fragaria x ananassa HOM05D000987 ORTHO05D000831 3.5e-39 165.2 86 98.8
FAN23G1522 Fragaria x ananassa HOM05D000987 ORTHO05D000831 2.8e-36 155.6 87 94.3
FAN26G0395 Fragaria x ananassa HOM05D000987 ORTHO05D000831 1.4e-35 153.3 87 93.1
RcHm_v2.0_Chr2g0120261 Rosa chinensis HOM05D000987 ORTHO05D000831 3.3e-29 132.1 92 80.4
QL06p029466 Quercus lobata HOM05D000987 ORTHO05D000831 7.1e-24 114.4 88 68.2
Cfa002829 Carpinus fangiana HOM05D000987 ORTHO05D000831 3.1e-19 99.0 93 58.1
VMungo1309G0365 Vigna mungo HOM05D000987 ORTHO05D000831 2.0e-18 96.3 84 65.5
Phvul.009G148800 Phaseolus vulgaris HOM05D000987 ORTHO05D000831 4.5e-18 95.1 84 65.5
Glyma.04G214400 Glycine max HOM05D000987 ORTHO05D000831 1.7e-17 93.2 86 61.6
Atru.chr4.829 Acer truncatum HOM05D000987 ORTHO05D000831 3.8e-17 92.0 98 56.1
Lj1g0028168 Lotus japonicus HOM05D000987 ORTHO05D000831 8.4e-17 90.9 84 61.9
Haze_25126 Corylus avellana HOM05D000987 ORTHO05D000831 1.9e-16 89.7 79 59.5
CiPaw.03G128500 Carya illinoinensis HOM05D000987 ORTHO05D000831 4.2e-16 88.6 93 53.8
Ca_16930_v3 Cicer arietinum L. HOM05D000987 ORTHO05D000831 1.2e-15 87.0 84 61.9
arahy.Tifrunner.gnm1.ann1.31N5UK Arachis hypogaea HOM05D000987 ORTHO05D000831 7.9e-15 84.3 89 53.9
Thecc.01G127200 Theobroma cacao HOM05D000987 ORTHO05D000831 1.8e-14 83.2 83 54.2
arahy.Tifrunner.gnm1.ann1.FFY9SF Arachis hypogaea HOM05D000987 ORTHO05D000831 2.3e-14 82.8 89 52.8
Psat5g056920 Pisum sativum HOM05D000987 ORTHO05D000831 1.1e-13 80.5 75 58.7
CANSAT01G1643 Cannabis sativa HOM05D000987 ORTHO05D000831 1.5e-13 80.1 84 54.8
Medtr3g095910 Medicago truncatula HOM05D000987 ORTHO05D000831 1.9e-13 79.7 92 54.3
TWI79G1471 Tripterygium wilfordii HOM05D000987 ORTHO05D000831 2.5e-13 79.3 91 51.6
Lalb_Chr08g0238471 Lupinus albus HOM05D000987 ORTHO05D000831 4.3e-13 78.6 86 59.3
GSVIVG01026525001 Vitis vinifera HOM05D000987 ORTHO05D000831 7.4e-13 77.8 93 46.2
CsaV3_6G041760 Cucumis sativus L. HOM05D000987 ORTHO05D000831 1.6e-12 76.6 76 57.9
Glyma.05G190200 Glycine max HOM05D000987 ORTHO05D000831 2.1e-12 76.3 92 53.3
Gohir.A11G056000 Gossypium hirsutum HOM05D000987 ORTHO05D000831 2.8e-12 75.9 82 48.8
Gorai.007G064800 Gossypium raimondii HOM05D000987 ORTHO05D000831 1.8e-11 73.2 82 46.3
Gohir.D11G060100 Gossypium hirsutum HOM05D000987 ORTHO05D000831 2.4e-11 72.8 81 46.9
Aqoxy6G00270 Aquilegia oxysepala HOM05D000987 ORTHO05D000831 5.3e-11 71.6 102 43.1
GSVIVG01010036001 Vitis vinifera HOM05D000987 ORTHO05D000831 6.9e-11 71.2 97 46.4
Potri.007G107200 Populus trichocarpa HOM05D000987 ORTHO05D000831 3.4e-10 68.9 72 52.8
Sed0016220 Sechium edule HOM05D000987 ORTHO05D000831 4.5e-10 68.6 76 53.9
TPR.G34647 Trifolium pratense HOM05D000987 ORTHO05D000831 7.6e-10 67.8 81 51.9
PSO541G5842 Papaver somniferum HOM05D000987 ORTHO05D000831 2.9e-09 65.9 100 43.0
PSO675G4990 Papaver somniferum HOM05D000987 ORTHO05D000831 6.5e-09 64.7 100 44.0
ClCG01G015520 Citrullus lanatus HOM05D000987 ORTHO05D000831 8.5e-09 64.3 61 57.4
Manes.12G153100 Manihot esculenta HOM05D000987 ORTHO05D000831 1.1e-08 63.9 80 48.8
Lsat_1_v5_gn_6_96520 Lactuca sativa HOM05D000987 ORTHO05D000831 1.4e-08 63.5 98 41.8
Eucgr.F02737 Eucalyptus grandis HOM05D000987 ORTHO05D000831 2.5e-08 62.8 98 42.9
Potri.005G061600 Populus trichocarpa HOM05D000987 ORTHO05D000831 2.5e-08 62.8 72 48.6
Dinv41119 Davidia involucrata HOM05D000987 ORTHO05D000831 4.2e-08 62.0 71 45.1
HanXRQChr05g0161151 Helianthus annuus HOM05D000987 ORTHO05D000831 9.3e-08 60.8 98 40.8
Actinidia01138 Actinidia chinensis HOM05D000987 ORTHO05D000831 1.2e-07 60.5 87 46.0
CANSAT25G1594 Cannabis sativa HOM05D000987 ORTHO05D000831 2.7e-07 59.3 98 40.8
MBI06_g18868_MAGBIO Magnolia biondii HOM05D000987 ORTHO05D046671 3.6e-07 58.9 84 46.4
Nn5g28633 Nelumbo nucifera HOM05D000987 ORTHO05D018809 4.6e-07 58.5 98 41.8
ECA246G0059 Erigeron canadensis HOM05D000987 ORTHO05D000831 7.9e-07 57.8 98 39.8
MBI03_g11316_MAGBIO Magnolia biondii HOM05D000987 ORTHO05D000831 7.9e-07 57.8 81 43.2
EL10Ac1g01477 Beta vulgaris HOM05D000987 ORTHO05D000831 1.0e-06 57.4 98 40.8
Eucgr.H04942 Eucalyptus grandis HOM05D000987 ORTHO05D000831 1.3e-06 57.0 86 38.4
Manes.18G087900 Manihot esculenta HOM05D000987 ORTHO05D000831 1.3e-06 57.0 96 40.6
Hund17399 Selenicereus undatus HOM05D000987 ORTHO05D000831 3.0e-06 55.8 98 37.8
Gohir.A10G082400 Gossypium hirsutum HOM05D000987 ORTHO05D000831 6.7e-06 54.7 76 42.1


User provided reference genes

Program Settings