Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN18G0654 Fragaria x ananassa HOM05D006567 ORTHO05D009430 2.6e-214 748.4 370 100.0
FAN04G2727 Fragaria x ananassa HOM05D006567 ORTHO05D009430 1.7e-210 735.7 370 98.1
FAN08G1209 Fragaria x ananassa HOM05D006567 ORTHO05D009430 3.3e-209 731.5 368 98.1
RcHm_v2.0_Chr7g0203711 Rosa chinensis HOM05D006567 ORTHO05D009430 4.5e-203 711.1 369 94.0
MD04G1062400 Malus domestica HOM05D006567 ORTHO05D009430 6.4e-197 690.6 371 90.8
QL12p011664 Quercus lobata HOM05D006567 ORTHO05D009430 5.4e-188 661.0 369 87.5
Glyma.05G061300 Glycine max HOM05D006567 ORTHO05D009430 4.3e-185 651.4 366 84.7
arahy.Tifrunner.gnm1.ann1.69E4XE Arachis hypogaea HOM05D006567 ORTHO05D009430 1.6e-184 649.4 361 85.9
SalBow6G6157 Salvia bowleyana HOM05D006567 ORTHO05D009430 1.6e-184 649.4 364 85.4
VMungo0251G1330 Vigna mungo HOM05D006567 ORTHO05D009430 2.1e-184 649.0 365 83.8
Lj4g0021343 Lotus japonicus HOM05D006567 ORTHO05D009430 2.8e-184 648.7 370 85.1
arahy.Tifrunner.gnm1.ann1.E0WBQ7 Arachis hypogaea HOM05D006567 ORTHO05D009430 3.6e-184 648.3 361 85.6
Cfa015824 Carpinus fangiana HOM05D006567 ORTHO05D009430 2.3e-183 645.6 369 85.6
Sabra03G0048700 Salix brachista HOM05D006567 ORTHO05D009430 1.2e-182 643.3 370 83.5
Lalb_Chr05g0221201 Lupinus albus HOM05D006567 ORTHO05D009430 4.4e-182 641.3 361 85.3
TPR.G37608 Trifolium pratense HOM05D006567 ORTHO05D009430 9.9e-182 640.2 368 83.4
MSTRG.12113 Avicennia marina HOM05D006567 ORTHO05D009430 1.3e-181 639.8 367 83.1
Psat4g072680 Pisum sativum HOM05D006567 ORTHO05D009430 1.3e-181 639.8 371 83.6
CANSAT21G0369 Cannabis sativa HOM05D006567 ORTHO05D009430 2.2e-181 639.0 367 83.4
Ca_21975_v3 Cicer arietinum L. HOM05D006567 ORTHO05D009430 4.9e-181 637.9 361 86.1
Medtr4g100760 Medicago truncatula HOM05D006567 ORTHO05D009430 4.9e-181 637.9 367 84.2
Actinidia14413 Actinidia chinensis HOM05D006567 ORTHO05D009430 6.4e-181 637.5 361 84.8
Potri.003G078500 Populus trichocarpa HOM05D006567 ORTHO05D009430 8.3e-181 637.1 363 84.0
COL.COLO4_37145 Corchorus olitorius HOM05D006567 ORTHO05D009430 2.4e-180 635.6 362 83.7
Atru.chr9.1289 Acer truncatum HOM05D006567 ORTHO05D009430 3.2e-180 635.2 368 83.4
Cc08_g12240 Coffea canephora HOM05D006567 ORTHO05D009430 4.1e-180 634.8 369 82.7
Phvul.003G221900 Phaseolus vulgaris HOM05D006567 ORTHO05D009430 5.4e-180 634.4 365 82.5
TAR636G1533 Trochodendron aralioides HOM05D006567 ORTHO05D009430 5.4e-180 634.4 361 83.9
vmacro00188 Vaccinium macrocarpon HOM05D006567 ORTHO05D009430 1.6e-179 632.9 362 83.7
CSS0024870 Camellia sinensis var. sinensis HOM05D006567 ORTHO05D009430 7.8e-179 630.6 366 82.8
Peaxi162Scf00209g00122 Petunia axillaris HOM05D006567 ORTHO05D009430 2.3e-178 629.0 362 83.1
Thecc.03G249000 Theobroma cacao HOM05D006567 ORTHO05D009430 5.1e-178 627.9 366 82.2
Migut.A01121 Erythranthe guttata HOM05D006567 ORTHO05D009430 2.5e-177 625.5 363 83.5
Aqoxy7G00822 Aquilegia oxysepala HOM05D006567 ORTHO05D009430 5.6e-177 624.4 361 83.4
PGR031G0713 Punica granatum HOM05D006567 ORTHO05D009430 5.6e-177 624.4 369 81.0
CsaV3_5G004320 Cucumis sativus L. HOM05D006567 ORTHO05D009430 1.2e-176 623.2 367 80.9
Gohir.D12G218600 Gossypium hirsutum HOM05D006567 ORTHO05D009430 1.2e-176 623.2 366 81.4
Cpa.g.sc29.179 Carica papaya HOM05D006567 ORTHO05D009430 1.6e-176 622.9 363 80.4
Gorai.008G234200 Gossypium raimondii HOM05D006567 ORTHO05D009430 2.1e-176 622.5 366 81.4
TWI81G0123 Tripterygium wilfordii HOM05D006567 ORTHO05D009430 2.8e-176 622.1 371 80.3
Eucgr.D02095 Eucalyptus grandis HOM05D006567 ORTHO05D009430 4.7e-176 621.3 361 82.3
MBI04_g09522_MAGBIO Magnolia biondii HOM05D006567 ORTHO05D009430 6.2e-176 620.9 367 81.7
Nn1g00949 Nelumbo nucifera HOM05D006567 ORTHO05D009430 6.2e-176 620.9 364 82.7
MELO3C005521.2 Cucumis melo HOM05D006567 ORTHO05D009430 1.1e-175 620.2 367 80.7
Gohir.A12G216000 Gossypium hirsutum HOM05D006567 ORTHO05D009430 2.4e-175 619.0 372 80.6
PGSC0003DMG400004822 Solanum tuberosum HOM05D006567 ORTHO05D009430 2.4e-175 619.0 362 82.0
Hund11604 Selenicereus undatus HOM05D006567 ORTHO05D009430 3.1e-175 618.6 370 78.6
Duzib084G0744 Durio zibethinus HOM05D006567 ORTHO05D009430 5.2e-175 617.8 366 80.3
Ciclev10020637m.g Citrus clementina HOM05D006567 ORTHO05D009430 2.0e-174 615.9 366 80.9
HanXRQChr13g0417851 Helianthus annuus HOM05D006567 ORTHO05D009430 7.6e-174 614.0 361 79.8
Solyc08g078460.3 Solanum lycopersicum HOM05D006567 ORTHO05D009430 9.9e-174 613.6 362 81.2
Sopen08g026950 Solanum pennellii HOM05D006567 ORTHO05D009430 9.9e-174 613.6 362 81.2
Haze_00669 Corylus avellana HOM05D006567 ORTHO05D009430 1.7e-173 612.8 400 78.0
Ah.12g054200 Amaranthus hybridus HOM05D006567 ORTHO05D006679 2.2e-173 612.5 361 80.3
ClCG01G004160 Citrullus lanatus HOM05D006567 ORTHO05D009430 2.4e-172 609.0 378 78.3
CAN.G1178.26 Capsicum annuum HOM05D006567 ORTHO05D009430 3.2e-172 608.6 362 80.4
ECA240G4587 Erigeron canadensis HOM05D006567 ORTHO05D009430 3.2e-172 608.6 360 79.7
DCAR_004966 Daucus carota HOM05D006567 ORTHO05D009430 3.5e-171 605.1 360 80.0
Lsat_1_v5_gn_6_92541 Lactuca sativa HOM05D006567 ORTHO05D009430 1.0e-170 603.6 361 78.1
EL10Ac5g12369 Beta vulgaris HOM05D006567 ORTHO05D009430 9.6e-169 597.0 372 78.8
Carub.0007s2404 Capsella rubella HOM05D006567 ORTHO05D009430 2.1e-168 595.9 368 77.4
EL10Ac5g12374 Beta vulgaris HOM05D006567 ORTHO05D009430 4.8e-168 594.7 362 79.3
CARHR223980 Cardamine hirsuta HOM05D006567 ORTHO05D009430 4.8e-168 594.7 368 76.9
Nitab4.5_0001381g0120 Nicotiana tabacum HOM05D006567 ORTHO05D009430 8.1e-168 594.0 363 80.2
Thhalv10025513m.g Eutrema salsugineum HOM05D006567 ORTHO05D009430 1.8e-167 592.8 368 76.4
SGA_v2.0_scaffold26G11306 Striga asiatica HOM05D006567 ORTHO05D009430 5.3e-167 591.3 374 77.5
BcaNung03466 Brassica carinata HOM05D006567 ORTHO05D009430 3.4e-166 588.6 365 76.4
AUR62019967 Chenopodium quinoa HOM05D006567 ORTHO05D009430 3.4e-166 588.6 352 78.7
AT4G17370 Arabidopsis thaliana HOM05D006567 ORTHO05D009430 2.2e-165 585.9 368 76.4
THA.LOC104806666 Tarenaya hassleriana HOM05D006567 ORTHO05D009430 3.8e-165 585.1 371 75.7
PSO170G1323 Papaver somniferum HOM05D006567 ORTHO05D009430 1.1e-164 583.6 388 74.7
A03p50390 Brassica napus HOM05D006567 ORTHO05D009430 1.4e-164 583.2 367 74.9
BraA03t14129Z Brassica rapa HOM05D006567 ORTHO05D009430 1.4e-164 583.2 367 74.7
Sp7g16810 Schrenkiella parvula HOM05D006567 ORTHO05D009430 1.4e-164 583.2 368 75.8
BolC7t45378H Brassica oleracea HOM05D006567 ORTHO05D009430 2.4e-164 582.4 367 75.5
AL7G37340 Arabidopsis lyrata HOM05D006567 ORTHO05D009430 3.2e-164 582.0 383 74.2
PSO017G4082 Papaver somniferum HOM05D006567 ORTHO05D009430 3.9e-162 575.1 380 75.0
Nitab4.5_0002289g0070 Nicotiana tabacum HOM05D006567 ORTHO05D009430 3.3e-161 572.0 362 77.6
Aa31LG1G23140 Aethionema arabicum HOM05D006567 ORTHO05D009430 4.0e-159 565.1 355 74.9
ATR0057G105 Amborella trichopoda HOM05D006567 ORTHO05D009430 1.2e-158 563.5 366 74.3
HPP92_025881 Vanilla planifolia HOM05D006567 ORTHO05D009430 1.7e-157 559.7 364 74.7
unitig_899.g15594 Utricularia gibba HOM05D006567 ORTHO05D009430 2.7e-155 552.4 370 73.0
AUR62007104 Chenopodium quinoa HOM05D006567 ORTHO05D009430 1.9e-153 546.2 350 74.6
SEGI_34288 Sequoiadendron giganteum HOM05D006567 ORTHO05D009430 1.2e-150 537.0 360 71.1
CiPaw.11G081200 Carya illinoinensis HOM05D006567 ORTHO05D009430 3.2e-148 528.9 299 86.3
Prupe.5G066000 Prunus persica HOM05D006567 ORTHO05D009430 2.3e-146 522.7 272 91.9
Os08g0148267 Oryza sativa ssp. japonica HOM05D006567 ORTHO05D009430 2.1e-144 516.2 303 82.8
Manes.01G082300 Manihot esculenta HOM05D006567 ORTHO05D009430 1.7e-141 506.5 283 86.2
Dinv39160 Davidia involucrata HOM05D006567 ORTHO05D009430 2.9e-141 505.8 283 87.3
AagrBONN_evm.TU.Sc2ySwM_228.3639 Anthoceros agrestis HOM05D006567 ORTHO05D009430 2.5e-137 492.7 364 65.1
SMO228G0171 Selaginella moellendorffii HOM05D006567 ORTHO05D009430 1.5e-134 483.4 364 66.5
Sed0022818 Sechium edule HOM05D006567 ORTHO05D009430 1.3e-133 480.3 273 83.5
Mapoly0040s0044 Marchantia polymorpha HOM05D006567 ORTHO05D009430 1.4e-132 476.9 363 64.2
Pp3c4_15440 Physcomitrium patens HOM05D006567 ORTHO05D009430 1.1e-129 467.2 367 62.9
FvH4_5g19170 Fragaria vesca HOM05D006567 ORTHO05D009430 1.5e-129 466.8 230 98.3
Zm00001eb416490 Zea mays HOM05D006567 ORTHO05D009430 1.0e-125 454.1 306 73.2
Lj2C221T14 Lonicera japonica HOM05D006567 ORTHO05D009430 6.1e-115 418.3 241 83.8
GSVIVG01004725001 Vitis vinifera HOM05D006567 ORTHO05D009430 3.9e-114 415.6 227 88.1
Sc07g0009260 Simmondsia chinensis HOM05D006567 ORTHO05D009430 7.7e-110 401.4 224 83.5
Rhsim09G0000200 Rhododendron simsii HOM05D006567 ORTHO05D009430 2.2e-109 399.8 409 52.8
Glyma.17G143100 Glycine max HOM05D006567 ORTHO05D009430 3.3e-84 316.2 184 79.3
BcaC06g33541 Brassica carinata HOM05D006567 ORTHO05D009430 3.0e-69 266.5 210 63.3
FvH4_5g07380 Fragaria vesca HOM05D006567 ORTHO05D015939 6.0e-62 242.3 120 97.5
FvH4_3g36620 Fragaria vesca HOM05D006567 ORTHO05D015939 6.2e-59 232.3 124 93.5
FAN04G0922 Fragaria x ananassa HOM05D006567 ORTHO05D015939 6.2e-59 232.3 124 92.7
FAN09G0929 Fragaria x ananassa HOM05D006567 ORTHO05D015939 1.8e-58 230.7 123 92.7
FAN22G0783 Fragaria x ananassa HOM05D006567 ORTHO05D015939 1.8e-58 230.7 123 92.7
FAN27G0484 Fragaria x ananassa HOM05D006567 ORTHO05D015939 6.4e-56 222.2 124 90.3
QL08p052096 Quercus lobata HOM05D006567 ORTHO05D015939 8.7e-53 211.8 120 83.3
QL08p055973 Quercus lobata HOM05D006567 ORTHO05D015939 8.7e-53 211.8 130 76.9
Rhsim09G0000100 Rhododendron simsii HOM05D006567 ORTHO05D009430 4.0e-34 149.8 95 77.9
BcaC06g33542 Brassica carinata HOM05D006567 ORTHO05D015939 5.8e-33 146.0 95 71.6
FAN28G1973 Fragaria x ananassa HOM05D006567 ORTHO05D015939 7.2e-23 112.5 57 87.7
Pp3s96_60 Physcomitrium patens HOM05D016182 ORTHO05D028865 2.2e-11 74.3 285 25.6
TPR.G40300 Trifolium pratense HOM05D006567 ORTHO05D412752 1.1e-10 72.0 54 61.1
Pp3s34_460 Physcomitrium patens HOM05D001684 ORTHO05D018939 1.8e-10 71.2 281 27.8
TPR.G24425 Trifolium pratense HOM05D006567 ORTHO05D411483 1.8e-10 71.2 54 59.3
TPR.G2696 Trifolium pratense HOM05D006567 ORTHO05D411767 2.4e-10 70.9 54 61.1
AL7G37260 Arabidopsis lyrata HOM05D006567 ORTHO05D015939 1.2e-09 68.6 43 72.1
TPR.G2679 Trifolium pratense HOM05D006567 ORTHO05D412848 4.5e-09 66.6 54 57.4
EL10Ac4g09527 Beta vulgaris HOM05D006567 ORTHO05D010541 7.2e-07 59.3 63 47.6
Ca_29050_v3 Cicer arietinum L. HOM05D006567 ORTHO05D018939 1.2e-06 58.5 220 27.3


User provided reference genes

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