Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN18G0623 Fragaria x ananassa HOM05D007523 ORTHO05D009520 4.3e-108 394.8 221 100.0
FAN18G3486 Fragaria x ananassa HOM05D007523 ORTHO05D009520 4.3e-108 394.8 221 100.0
FvH4_5g23880 Fragaria vesca HOM05D007523 ORTHO05D009520 3.4e-81 305.4 175 100.0
FAN04G1224 Fragaria x ananassa HOM05D007523 ORTHO05D009520 8.8e-77 290.8 175 96.0
RcHm_v2.0_Chr7g0213271 Rosa chinensis HOM05D007523 ORTHO05D009520 1.6e-70 270.0 173 90.8
MD06G1014600 Malus domestica HOM05D007523 ORTHO05D009520 6.3e-51 204.9 177 71.8
Prupe.5G021500 Prunus persica HOM05D007523 ORTHO05D009520 1.1e-47 194.1 174 70.1
Haze_08076 Corylus avellana HOM05D007523 ORTHO05D009520 4.7e-38 162.2 163 62.6
Dinv28021 Davidia involucrata HOM05D007523 ORTHO05D009520 1.0e-37 161.0 163 62.0
QL12p000900 Quercus lobata HOM05D007523 ORTHO05D009520 7.5e-36 154.8 173 57.8
TAR629G3055 Trochodendron aralioides HOM05D007523 ORTHO05D009520 9.8e-36 154.5 175 56.6
Potri.001G132400 Populus trichocarpa HOM05D007523 ORTHO05D009520 8.3e-35 151.4 168 56.0
Sabra01G0102200 Salix brachista HOM05D007523 ORTHO05D009520 2.7e-33 146.4 168 55.4
Lalb_Chr16g0392051 Lupinus albus HOM05D007523 ORTHO05D009520 7.8e-33 144.8 173 54.3
Nn1g02124 Nelumbo nucifera HOM05D007523 ORTHO05D009520 7.8e-33 144.8 175 54.9
TWI34G1559 Tripterygium wilfordii HOM05D007523 ORTHO05D009520 7.8e-33 144.8 166 59.6
Manes.17G008000 Manihot esculenta HOM05D007523 ORTHO05D009520 1.7e-32 143.7 175 52.0
GSVIVG01026296001 Vitis vinifera HOM05D007523 ORTHO05D009520 2.3e-32 143.3 175 57.7
Atru.chr6.1496 Acer truncatum HOM05D007523 ORTHO05D009520 3.9e-32 142.5 163 58.3
CANSAT21G1314 Cannabis sativa HOM05D007523 ORTHO05D009520 1.5e-31 140.6 177 55.9
CSS0003197 Camellia sinensis var. sinensis HOM05D007523 ORTHO05D009520 2.5e-31 139.8 175 56.6
CSS0001694 Camellia sinensis var. sinensis HOM05D007523 ORTHO05D009520 5.6e-31 138.7 173 56.6
CiPaw.11G102500 Carya illinoinensis HOM05D007523 ORTHO05D009520 7.3e-31 138.3 175 55.4
Thecc.02G365300 Theobroma cacao HOM05D007523 ORTHO05D009520 2.1e-30 136.7 176 54.5
ClCG07G002350 Citrullus lanatus HOM05D007523 ORTHO05D009520 2.8e-30 136.3 174 54.0
vmacro00070 Vaccinium macrocarpon HOM05D007523 ORTHO05D009520 4.7e-30 135.6 173 46.8
CsaV3_3G030330 Cucumis sativus L. HOM05D007523 ORTHO05D009520 6.8e-29 131.7 174 51.7
Lj4g0001215 Lotus japonicus HOM05D007523 ORTHO05D009520 4.4e-28 129.0 163 54.6
arahy.Tifrunner.gnm1.ann1.7DC73F Arachis hypogaea HOM05D007523 ORTHO05D009520 7.5e-28 128.3 168 54.2
Sed0002333 Sechium edule HOM05D007523 ORTHO05D009520 7.5e-28 128.3 175 56.0
arahy.Tifrunner.gnm1.ann1.19GUIE Arachis hypogaea HOM05D007523 ORTHO05D009520 9.8e-28 127.9 168 54.2
Oeu017333.1 Olea europaea HOM05D007523 ORTHO05D009520 2.2e-27 126.7 171 52.6
Ciclev10002679m.g Citrus clementina HOM05D007523 ORTHO05D009520 2.9e-27 126.3 170 54.7
Eucgr.D02602 Eucalyptus grandis HOM05D007523 ORTHO05D009520 3.7e-27 125.9 174 57.5
Ca_22486_v3 Cicer arietinum L. HOM05D007523 ORTHO05D009520 4.9e-27 125.6 174 49.4
TPR.G31317 Trifolium pratense HOM05D007523 ORTHO05D009520 8.3e-27 124.8 175 49.1
Nn3g19239 Nelumbo nucifera HOM05D007523 ORTHO05D009520 1.1e-26 124.4 175 49.7
Cc08_g04400 Coffea canephora HOM05D007523 ORTHO05D009520 1.9e-26 123.6 177 44.6
Sc22g0001970 Simmondsia chinensis HOM05D007523 ORTHO05D009520 3.2e-26 122.9 165 50.3
Duzib248G0934 Durio zibethinus HOM05D007523 ORTHO05D009520 4.1e-26 122.5 176 50.0
MSTRG.1775 Avicennia marina HOM05D007523 ORTHO05D009520 7.0e-26 121.7 177 50.3
Migut.E01344 Erythranthe guttata HOM05D007523 ORTHO05D009520 2.0e-25 120.2 182 49.5
Actinidia04633 Actinidia chinensis HOM05D007523 ORTHO05D009520 3.5e-25 119.4 175 45.7
Phvul.003G279400 Phaseolus vulgaris HOM05D007523 ORTHO05D009520 3.5e-25 119.4 173 49.1
Rhsim11G0026000 Rhododendron simsii HOM05D007523 ORTHO05D009520 3.5e-25 119.4 151 51.0
PGR031G0795 Punica granatum HOM05D007523 ORTHO05D009520 6.0e-25 118.6 132 67.4
SGA_v2.0_scaffold96G29060 Striga asiatica HOM05D007523 ORTHO05D009520 1.0e-24 117.9 168 50.0
Medtr8g071180 Medicago truncatula HOM05D007523 ORTHO05D009520 1.7e-24 117.1 175 46.9
Carub.0007s2207 Capsella rubella HOM05D007523 ORTHO05D009520 3.0e-24 116.3 175 49.7
VMungo0251G0133 Vigna mungo HOM05D007523 ORTHO05D009520 6.6e-24 115.2 177 48.0
Aqoxy4G00046 Aquilegia oxysepala HOM05D007523 ORTHO05D009520 8.6e-24 114.8 168 47.6
CARHR225970 Cardamine hirsuta HOM05D007523 ORTHO05D009520 1.1e-23 114.4 173 47.4
Thhalv10026426m.g Eutrema salsugineum HOM05D007523 ORTHO05D009520 1.1e-23 114.4 145 55.2
Solyc12g096090.2 Solanum lycopersicum HOM05D007523 ORTHO05D009520 1.1e-23 114.4 176 52.3
A03p51710 Brassica napus HOM05D000137 ORTHO05D002305 1.5e-23 114.0 155 52.3
THA.LOC104811020 Tarenaya hassleriana HOM05D007523 ORTHO05D009520 1.5e-23 114.0 146 56.8
C07p50210 Brassica napus HOM05D000137 ORTHO05D002305 1.9e-23 113.6 155 52.9
AL7G35030 Arabidopsis lyrata HOM05D007523 ORTHO05D009520 2.5e-23 113.2 174 50.0
PSO675G0851 Papaver somniferum HOM05D007523 ORTHO05D009520 2.5e-23 113.2 174 46.6
Psat4g110520 Pisum sativum HOM05D007523 ORTHO05D009520 2.5e-23 113.2 168 48.8
AT4G19070 Arabidopsis thaliana HOM05D007523 ORTHO05D009520 3.3e-23 112.8 175 48.0
BraA03t14258Z Brassica rapa HOM05D000452 ORTHO05D000647 4.3e-23 112.5 155 51.6
Sp7g17790 Schrenkiella parvula HOM05D007523 ORTHO05D005023 9.5e-23 111.3 145 53.8
Sopen12g031980 Solanum pennellii HOM05D007523 ORTHO05D009520 1.2e-22 110.9 150 57.3
BcaNung03083 Brassica carinata HOM05D007523 ORTHO05D009520 1.6e-22 110.5 145 53.8
PSO675G0835 Papaver somniferum HOM05D007523 ORTHO05D009520 1.6e-22 110.5 144 54.2
BolC7t45523H Brassica oleracea HOM05D007523 ORTHO05D009520 2.8e-22 109.8 145 53.8
Peaxi162Scf00876g00434 Petunia axillaris HOM05D007523 ORTHO05D009520 2.8e-22 109.8 155 51.0
ECA240G1522 Erigeron canadensis HOM05D007523 ORTHO05D009520 3.6e-22 109.4 165 52.1
Aa31LG6G1770 Aethionema arabicum HOM05D007523 ORTHO05D005023 4.7e-22 109.0 174 47.1
Migut.A00547 Erythranthe guttata HOM05D007523 ORTHO05D009520 4.7e-22 109.0 178 46.6
Gorai.008G189000 Gossypium raimondii HOM05D007523 ORTHO05D009520 4.7e-22 109.0 174 50.6
Nitab4.5_0006741g0030 Nicotiana tabacum HOM05D007523 ORTHO05D009520 6.2e-22 108.6 151 57.0
ATR1098G100 Amborella trichopoda HOM05D007523 ORTHO05D009520 8.1e-22 108.2 117 65.0
Glyma.16G104300 Glycine max HOM05D007523 ORTHO05D009520 8.1e-22 108.2 173 46.8
Nitab4.5_0000943g0130 Nicotiana tabacum HOM05D007523 ORTHO05D009520 8.1e-22 108.2 151 56.3
SalBow8G2402 Salvia bowleyana HOM05D007523 ORTHO05D009520 8.1e-22 108.2 168 47.6
CAN.G947.41 Capsicum annuum HOM05D007523 ORTHO05D009520 1.1e-21 107.8 150 55.3
Gohir.A12G173966 Gossypium hirsutum HOM05D007523 ORTHO05D009520 1.8e-21 107.1 174 50.0
Gohir.D12G176600 Gossypium hirsutum HOM05D007523 ORTHO05D009520 2.3e-21 106.7 174 50.0
PGSC0003DMG400029292 Solanum tuberosum HOM05D007523 ORTHO05D009520 2.3e-21 106.7 147 55.8
BcaC06g30615 Brassica carinata HOM05D007523 ORTHO05D009520 1.2e-20 104.4 146 52.1
HanXRQChr03g0082201 Helianthus annuus HOM05D007523 ORTHO05D009520 2.0e-20 103.6 99 70.7
MBI18_g28211_MAGBIO Magnolia biondii HOM05D007523 ORTHO05D009520 4.4e-20 102.4 131 57.3
HPP92_012195 Vanilla planifolia HOM05D007523 ORTHO05D009520 1.3e-19 100.9 173 49.7
Cpa.g.sc355.1 Carica papaya HOM05D007523 ORTHO05D009520 1.1e-18 97.8 110 63.6
unitig_0.g2217 Utricularia gibba HOM05D007523 ORTHO05D009520 3.2e-18 96.3 182 43.4
Peaxi162Scf00972g00043 Petunia axillaris HOM05D007523 ORTHO05D009520 5.4e-18 95.5 107 65.4
CDE05G0732 Ceratophyllum demersum HOM05D007523 ORTHO05D009520 7.1e-18 95.1 172 44.8
SalBow4G0950 Salvia bowleyana HOM05D007523 ORTHO05D009520 2.7e-17 93.2 98 64.3
AUR62007395 Chenopodium quinoa HOM05D002287 ORTHO05D009520 3.0e-16 89.7 174 46.0
EL10Ac5g11951 Beta vulgaris HOM05D007523 ORTHO05D009520 3.9e-16 89.4 88 72.7
AagrBONN_evm.TU.Sc2ySwM_368.2556 Anthoceros agrestis HOM05D007523 ORTHO05D009520 4.3e-15 85.9 148 41.9
MSTRG.11889 Avicennia marina HOM05D007523 ORTHO05D009520 4.3e-15 85.9 78 83.3
Ah.12g055890 Amaranthus hybridus HOM05D002287 ORTHO05D002588 5.6e-15 85.5 78 78.2
Os07g0143600 Oryza sativa ssp. japonica HOM05D007523 ORTHO05D009520 5.6e-15 85.5 185 42.7
AUR62027336 Chenopodium quinoa HOM05D007523 ORTHO05D009520 9.5e-15 84.7 87 72.4
Mapoly0024s0063 Marchantia polymorpha HOM05D007523 ORTHO05D009520 2.8e-14 83.2 116 56.9
Pp3c19_7810 Physcomitrium patens HOM05D007523 ORTHO05D009520 8.1e-14 81.6 150 42.7
COL.COLO4_11248 Corchorus olitorius HOM05D007523 ORTHO05D009520 1.2e-12 77.8 129 41.9
SMO353G0121 Selaginella moellendorffii HOM05D007523 ORTHO05D009520 1.2e-12 77.8 85 70.6
SMO364G0280 Selaginella moellendorffii HOM05D007523 ORTHO05D009520 3.4e-12 76.3 80 72.5
Mapoly0010s0014 Marchantia polymorpha HOM05D007523 ORTHO05D009520 9.9e-12 74.7 169 37.9


User provided reference genes

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