Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN18G0592 Fragaria x ananassa HOM05D006487 ORTHO05D007982 2.5e-212 741.9 392 100.0
FvH4_5g18410 Fragaria vesca HOM05D006487 ORTHO05D007982 9.8e-164 580.5 403 78.9
FAN08G3399 Fragaria x ananassa HOM05D006487 ORTHO05D007982 8.3e-163 577.4 371 83.8
FAN13G0937 Fragaria x ananassa HOM05D006487 ORTHO05D007982 6.4e-155 551.2 330 86.7
FAN04G2664 Fragaria x ananassa HOM05D006487 ORTHO05D007982 5.6e-135 485.0 313 83.1
RcHm_v2.0_Chr7g0177071 Rosa chinensis HOM05D006487 ORTHO05D007982 1.2e-129 467.2 367 68.7
Prupe.5G243800 Prunus persica HOM05D006487 ORTHO05D007982 1.1e-114 417.5 378 61.1
Haze_18332 Corylus avellana HOM05D006487 ORTHO05D007982 4.4e-95 352.4 419 51.1
MD14G1245900 Malus domestica HOM05D006487 ORTHO05D007982 3.2e-90 336.3 403 48.4
CANSAT64G1132 Cannabis sativa HOM05D006487 ORTHO05D007982 1.3e-86 324.3 364 51.6
Phvul.004G139000 Phaseolus vulgaris HOM05D006487 ORTHO05D007982 1.3e-86 324.3 355 54.1
Prupe.4G244900 Prunus persica HOM05D006487 ORTHO05D007982 4.8e-86 322.4 250 66.0
Thecc.05G197400 Theobroma cacao HOM05D006487 ORTHO05D007982 9.1e-85 318.2 396 50.8
Lj2g0009690 Lotus japonicus HOM05D006487 ORTHO05D007982 3.5e-84 316.2 360 52.2
Manes.02G218400 Manihot esculenta HOM05D006487 ORTHO05D007982 3.5e-84 316.2 353 51.8
VMungo0464G1082 Vigna mungo HOM05D006487 ORTHO05D007982 3.5e-84 316.2 340 52.9
COL.COLO4_24904 Corchorus olitorius HOM05D006487 ORTHO05D007982 4.5e-84 315.8 314 56.4
Glyma.09G164600 Glycine max HOM05D006487 ORTHO05D007982 2.9e-83 313.2 350 52.9
TWI81G0553 Tripterygium wilfordii HOM05D006487 ORTHO05D007982 5.0e-83 312.4 361 50.7
Actinidia34682 Actinidia chinensis HOM05D006487 ORTHO05D007982 1.5e-82 310.8 345 51.6
Glyma.16G213000 Glycine max HOM05D006487 ORTHO05D007982 1.9e-82 310.5 392 49.2
Dinv03426 Davidia involucrata HOM05D006487 ORTHO05D007982 4.2e-82 309.3 335 52.5
Psat1g121120 Pisum sativum HOM05D006487 ORTHO05D007982 6.1e-81 305.4 336 53.6
TAR629G0717 Trochodendron aralioides HOM05D006487 ORTHO05D007982 1.4e-80 304.3 375 50.1
Ciclev10020398m.g Citrus clementina HOM05D006487 ORTHO05D007982 1.8e-80 303.9 338 53.8
Gohir.A08G225300 Gossypium hirsutum HOM05D006487 ORTHO05D007982 3.0e-80 303.1 358 51.1
Hma1.2p1_0989F.1_g244820 Hydrangea macrophylla HOM05D006487 ORTHO05D007982 3.0e-80 303.1 377 48.8
Medtr6g077860 Medicago truncatula HOM05D006487 ORTHO05D007982 5.2e-80 302.4 354 51.7
Ca_11836_v3 Cicer arietinum L. HOM05D006487 ORTHO05D007982 6.7e-80 302.0 344 52.3
Nitab4.5_0003040g0090 Nicotiana tabacum HOM05D006487 ORTHO05D007982 6.7e-80 302.0 328 50.9
PSO063G4419 Papaver somniferum HOM05D006487 ORTHO05D007982 8.8e-80 301.6 349 50.1
Lalb_Chr22g0353991 Lupinus albus HOM05D006487 ORTHO05D007982 2.6e-79 300.1 344 52.0
Potri.004G069400 Populus trichocarpa HOM05D006487 ORTHO05D007982 4.4e-79 299.3 350 50.9
MBI06_g27513_MAGBIO Magnolia biondii HOM05D006487 ORTHO05D007982 1.3e-78 297.7 340 49.1
PGR083G2465 Punica granatum HOM05D006487 ORTHO05D007982 1.7e-78 297.4 344 49.1
Lsat_1_v5_gn_0_10541 Lactuca sativa HOM05D006487 ORTHO05D007982 2.2e-78 297.0 329 50.5
arahy.Tifrunner.gnm1.ann1.FG107U Arachis hypogaea HOM05D006487 ORTHO05D007982 6.3e-78 295.4 350 52.0
QL10p034099 Quercus lobata HOM05D006487 ORTHO05D007982 8.2e-78 295.0 360 50.6
arahy.Tifrunner.gnm1.ann1.49K0I5 Arachis hypogaea HOM05D006487 ORTHO05D007982 1.1e-77 294.7 350 51.7
Thhalv10011620m.g Eutrema salsugineum HOM05D006487 ORTHO05D007982 1.1e-77 294.7 319 49.8
Nitab4.5_0000782g0060 Nicotiana tabacum HOM05D006487 ORTHO05D007982 1.1e-77 294.7 329 51.7
Gorai.004G262200 Gossypium raimondii HOM05D006487 ORTHO05D007982 1.4e-77 294.3 358 49.2
Nn4g25081 Nelumbo nucifera HOM05D006487 ORTHO05D007982 2.4e-77 293.5 348 51.1
Gohir.D08G245700 Gossypium hirsutum HOM05D006487 ORTHO05D007982 3.1e-77 293.1 358 48.9
PSO782G2052 Papaver somniferum HOM05D006487 ORTHO05D007982 5.3e-77 292.4 353 48.2
AL1G54980 Arabidopsis lyrata HOM05D006487 ORTHO05D007982 7.0e-77 292.0 333 49.2
Cpa.g.sc168.16 Carica papaya HOM05D006487 ORTHO05D007982 5.9e-76 288.9 242 61.2
Atru.chr9.84 Acer truncatum HOM05D006487 ORTHO05D007982 7.7e-76 288.5 259 59.1
Carub.0001s3750 Capsella rubella HOM05D006487 ORTHO05D007982 7.7e-76 288.5 335 47.5
HanXRQChr15g0492111 Helianthus annuus HOM05D006487 ORTHO05D007982 7.7e-76 288.5 370 45.9
Sopen03g029330 Solanum pennellii HOM05D006487 ORTHO05D007982 1.0e-75 288.1 326 49.1
Aqoxy3G04297 Aquilegia oxysepala HOM05D006487 ORTHO05D007982 1.3e-75 287.7 341 48.7
Sed0005317 Sechium edule HOM05D006487 ORTHO05D007982 2.2e-75 287.0 351 49.6
GSVIVG01027119001 Vitis vinifera HOM05D006487 ORTHO05D007982 2.2e-75 287.0 313 52.4
Rhsim08G0124800 Rhododendron simsii HOM05D006487 ORTHO05D007982 3.8e-75 286.2 333 50.5
BcaB04g17434 Brassica carinata HOM05D006487 ORTHO05D007982 5.0e-75 285.8 339 48.7
CARHR037990 Cardamine hirsuta HOM05D006487 ORTHO05D007982 1.1e-74 284.6 335 48.4
Peaxi162Scf00171g00242 Petunia axillaris HOM05D006487 ORTHO05D007982 1.1e-74 284.6 269 55.0
PGSC0003DMG400010175 Solanum tuberosum HOM05D006487 ORTHO05D007982 1.1e-74 284.6 326 48.5
SGA_v2.0_scaffold90G27746 Striga asiatica HOM05D006487 ORTHO05D007982 1.5e-74 284.3 335 49.3
Sp1g35330 Schrenkiella parvula HOM05D006487 ORTHO05D007982 2.5e-74 283.5 336 47.6
CAN.G929.21 Capsicum annuum HOM05D006487 ORTHO05D007982 3.2e-74 283.1 340 49.4
Solyc03g098620.3 Solanum lycopersicum HOM05D006487 ORTHO05D007982 4.2e-74 282.7 326 48.8
A08p04750 Brassica napus HOM05D006487 ORTHO05D007982 7.2e-74 282.0 345 47.5
BraA08t32504Z Brassica rapa HOM05D006487 ORTHO05D007982 7.2e-74 282.0 345 47.5
C08p05120 Brassica napus HOM05D006487 ORTHO05D007982 9.4e-74 281.6 344 47.4
Oeu023551.1 Olea europaea HOM05D006487 ORTHO05D007982 9.4e-74 281.6 344 49.4
BcaC07g37138 Brassica carinata HOM05D006487 ORTHO05D007982 1.2e-73 281.2 342 47.7
AT1G48380 Arabidopsis thaliana HOM05D006487 ORTHO05D007982 1.6e-73 280.8 347 46.7
BolC8t47322H Brassica oleracea HOM05D006487 ORTHO05D007982 4.7e-73 279.3 341 47.5
CsaV3_1G007510 Cucumis sativus L. HOM05D006487 ORTHO05D007982 6.1e-73 278.9 365 48.8
ClCG01G014820 Citrullus lanatus HOM05D006487 ORTHO05D007982 2.3e-72 276.9 250 57.2
MSTRG.23212 Avicennia marina HOM05D006487 ORTHO05D007982 4.0e-72 276.2 383 44.9
THA.LOC104820327 Tarenaya hassleriana HOM05D006487 ORTHO05D007982 1.5e-71 274.2 314 49.7
MELO3C002168.2 Cucumis melo HOM05D006487 ORTHO05D007982 3.4e-71 273.1 369 46.6
Migut.O00267 Erythranthe guttata HOM05D006487 ORTHO05D007982 5.7e-71 272.3 346 46.5
AUR62040775 Chenopodium quinoa HOM05D006487 ORTHO05D007982 2.2e-70 270.4 242 57.4
AUR62033020 Chenopodium quinoa HOM05D006487 ORTHO05D007982 4.8e-70 269.2 290 50.0
Sc07g0007560 Simmondsia chinensis HOM05D006487 ORTHO05D007982 8.3e-70 268.5 314 49.7
Sabra04G0046600 Salix brachista HOM05D006487 ORTHO05D007982 2.0e-68 263.8 390 44.6
Eucgr.H00648 Eucalyptus grandis HOM05D006487 ORTHO05D007982 4.5e-68 262.7 220 61.4
SalBow5G2999 Salvia bowleyana HOM05D006487 ORTHO05D007982 8.6e-67 258.5 361 43.8
DCAR_011682 Daucus carota HOM05D006487 ORTHO05D007982 1.5e-66 257.7 384 43.8
ATR0618G270 Amborella trichopoda HOM05D006487 ORTHO05D007982 3.6e-65 253.1 280 49.6
HPP92_014774 Vanilla planifolia HOM05D006487 ORTHO05D007982 4.7e-65 252.7 378 43.1
Cc04_g08450 Coffea canephora HOM05D006487 ORTHO05D007982 4.0e-64 249.6 336 45.8
EL10Ac8g19478 Beta vulgaris HOM05D006487 ORTHO05D007982 8.8e-64 248.4 347 43.5
vmacro17744 Vaccinium macrocarpon HOM05D006487 ORTHO05D007982 8.8e-64 248.4 322 45.7
FAN09G4505 Fragaria x ananassa HOM05D006487 ORTHO05D007982 1.2e-63 248.1 123 97.6
CDE04G1004 Ceratophyllum demersum HOM05D006487 ORTHO05D007982 2.6e-63 246.9 319 45.5
TPR.G19888 Trifolium pratense HOM05D006487 ORTHO05D007982 2.8e-62 243.4 264 53.0
Os07g0172200 Oryza sativa ssp. japonica HOM05D006487 ORTHO05D007982 7.0e-61 238.8 320 46.2
FAN09G0815 Fragaria x ananassa HOM05D006487 ORTHO05D007982 1.6e-60 237.7 122 95.9
Zm00001eb271770 Zea mays HOM05D006487 ORTHO05D007982 4.5e-60 236.1 328 45.1
SEGI_16734 Sequoiadendron giganteum HOM05D006487 ORTHO05D007982 7.3e-58 228.8 238 47.5
Hund22367 Selenicereus undatus HOM05D006487 ORTHO05D007982 3.0e-56 223.4 275 48.4
Cfa017861 Carpinus fangiana HOM05D006487 ORTHO05D007982 2.9e-54 216.9 257 50.6
Lj9A412T44 Lonicera japonica HOM05D006487 ORTHO05D007982 2.4e-53 213.8 336 42.6
Mapoly0080s0074 Marchantia polymorpha HOM05D006487 ORTHO05D007982 1.9e-50 204.1 278 41.4
SMO117G0078 Selaginella moellendorffii HOM05D006487 ORTHO05D007982 4.3e-50 203.0 187 52.9
AagrBONN_evm.TU.Sc2ySwM_228.567 Anthoceros agrestis HOM05D006487 ORTHO05D007982 1.6e-49 201.1 246 42.7
Pp3c25_9140 Physcomitrium patens HOM05D006487 ORTHO05D007982 1.6e-49 201.1 220 46.8
Pp3c5_25480 Physcomitrium patens HOM05D006487 ORTHO05D007982 1.6e-49 201.1 306 40.8
TAR629G1006 Trochodendron aralioides HOM05D006487 ORTHO05D007982 8.0e-49 198.7 140 66.4
CiPaw.16G073400 Carya illinoinensis HOM05D006487 ORTHO05D007982 1.2e-47 194.9 256 47.7
Aa31LG10G5380 Aethionema arabicum HOM05D006487 ORTHO05D007982 3.3e-42 176.8 221 44.3
Hma1.2p1_0989F.1_g244830 Hydrangea macrophylla HOM05D006487 ORTHO05D007982 4.3e-42 176.4 158 57.0
Prupe.2G315400 Prunus persica HOM05D006487 ORTHO05D007982 4.7e-41 172.9 183 51.9
Os06g0730200 Oryza sativa ssp. japonica HOM05D006487 ORTHO05D007982 7.8e-28 129.0 115 57.4
Cre13.g576500 Chlamydomonas reinhardtii HOM05D006487 ORTHO05D007982 1.3e-27 128.3 179 43.6
Ca_30285_v3 Cicer arietinum L. HOM05D006487 ORTHO05D007982 5.8e-23 112.8 187 41.7
TPR.G27400 Trifolium pratense HOM05D006487 ORTHO05D007982 2.9e-22 110.5 98 63.3
Ah.14g085790 Amaranthus hybridus HOM05D006487 ORTHO05D007982 3.2e-21 107.1 81 65.4
PRCOL_00006754 Prasinoderma coloniale HOM05D006487 ORTHO05D007982 7.8e-20 102.4 126 40.5
CBR_g34174 Chara braunii HOM05D006487 ORTHO05D007982 4.8e-17 93.2 174 32.2
MCO12G143 Micromonas commoda HOM05D006487 ORTHO05D007982 8.4e-14 82.4 174 31.0
CSS0035874 Camellia sinensis var. sinensis HOM05D006487 ORTHO05D007982 1.9e-13 81.3 237 31.2
BcaC05g27591 Brassica carinata HOM05D006487 ORTHO05D007982 9.6e-10 68.9 108 37.0
ECA232G2176 Erigeron canadensis HOM05D006487 ORTHO05D007982 1.2e-07 62.0 159 34.0
SMO117G0021 Selaginella moellendorffii HOM05D006487 ORTHO05D007982 2.9e-06 57.4 91 38.5


User provided reference genes

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