Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN18G0553 Fragaria x ananassa HOM05D000140 ORTHO05D207939 2.3e-27 124.8 60 100.0
FAN13G2695 Fragaria x ananassa HOM05D000140 ORTHO05D200386 1.4e-16 89.0 76 63.2
FvH4_1g07401 Fragaria vesca HOM05D000140 ORTHO05D000087 3.1e-08 61.2 31 87.1
FvH4_1g07410 Fragaria vesca HOM05D000140 ORTHO05D000087 3.1e-08 61.2 31 87.1
FAN19G1661 Fragaria x ananassa HOM05D000140 ORTHO05D000087 3.1e-08 61.2 31 87.1
FAN23G0435 Fragaria x ananassa HOM05D000140 ORTHO05D000087 3.1e-08 61.2 31 87.1
FAN23G1865 Fragaria x ananassa HOM05D000140 ORTHO05D002921 3.1e-08 61.2 31 87.1
FAN26G2202 Fragaria x ananassa HOM05D000140 ORTHO05D000087 3.1e-08 61.2 31 87.1
FAN26G3174 Fragaria x ananassa HOM05D000140 ORTHO05D000087 3.1e-08 61.2 31 87.1
RcHm_v2.0_Chr2g0093301 Rosa chinensis HOM05D000140 ORTHO05D000087 3.1e-08 61.2 31 87.1
RcHm_v2.0_Chr2g0093311 Rosa chinensis HOM05D000140 ORTHO05D000087 3.1e-08 61.2 31 87.1
RcHm_v2.0_Chr3g0459401 Rosa chinensis HOM05D000140 ORTHO05D000087 3.1e-08 61.2 31 87.1
RcHm_v2.0_Chr3g0459561 Rosa chinensis HOM05D000140 ORTHO05D000087 3.1e-08 61.2 31 87.1
FAN28G2723 Fragaria x ananassa HOM05D000140 ORTHO05D000087 5.2e-08 60.5 30 90.0
Duzib150G1561 Durio zibethinus HOM05D000140 ORTHO05D000087 2.0e-07 58.5 31 80.6
Duzib168G1097 Durio zibethinus HOM05D000140 ORTHO05D000087 2.0e-07 58.5 31 80.6
Duzib187G0268 Durio zibethinus HOM05D000140 ORTHO05D000087 2.0e-07 58.5 31 80.6
Gohir.A06G072500 Gossypium hirsutum HOM05D000140 ORTHO05D000087 2.0e-07 58.5 31 80.6
Gohir.A07G010900 Gossypium hirsutum HOM05D000140 ORTHO05D000087 2.0e-07 58.5 31 80.6
Gohir.D06G071100 Gossypium hirsutum HOM05D000140 ORTHO05D000087 2.0e-07 58.5 31 80.6
Gohir.D07G011125 Gossypium hirsutum HOM05D000140 ORTHO05D000087 2.0e-07 58.5 31 80.6
Gorai.001G011600 Gossypium raimondii HOM05D000140 ORTHO05D000087 2.0e-07 58.5 31 80.6
Gorai.010G082900 Gossypium raimondii HOM05D000140 ORTHO05D000087 2.0e-07 58.5 31 80.6
Prupe.3G298200 Prunus persica HOM05D000140 ORTHO05D000087 2.0e-07 58.5 31 80.6
Thecc.09G089700 Theobroma cacao HOM05D000140 ORTHO05D000087 2.0e-07 58.5 31 80.6
AUR62027506 Chenopodium quinoa HOM05D000140 ORTHO05D000087 5.8e-07 57.0 31 80.6
AUR62033977 Chenopodium quinoa HOM05D000140 ORTHO05D000087 5.8e-07 57.0 31 80.6
Lj4g0003810 Lotus japonicus HOM05D000140 ORTHO05D000087 5.8e-07 57.0 31 77.4
Ah.09g228310 Amaranthus hybridus HOM05D000140 ORTHO05D000087 7.6e-07 56.6 31 80.6
BcaNung05240 Brassica carinata HOM05D000140 ORTHO05D000087 1.3e-06 55.8 31 77.4
Glyma.13G104000 Glycine max HOM05D000140 ORTHO05D000087 1.3e-06 55.8 31 74.2
Glyma.17G055100 Glycine max HOM05D000140 ORTHO05D000087 1.3e-06 55.8 31 74.2
MD15G1206800 Malus domestica HOM05D000140 ORTHO05D000087 1.3e-06 55.8 31 77.4
Manes.03G033400 Manihot esculenta HOM05D000140 ORTHO05D000087 1.3e-06 55.8 31 77.4
Manes.16G102400 Manihot esculenta HOM05D000140 ORTHO05D000087 1.3e-06 55.8 31 77.4
Phvul.003G137000 Phaseolus vulgaris HOM05D000140 ORTHO05D000087 1.3e-06 55.8 31 74.2
Phvul.009G232500 Phaseolus vulgaris HOM05D000140 ORTHO05D000087 1.3e-06 55.8 30 80.0
Prupe.7G210000 Prunus persica HOM05D000140 ORTHO05D000087 1.3e-06 55.8 31 74.2
THA.LOC104811744 Tarenaya hassleriana HOM05D000140 ORTHO05D000087 1.3e-06 55.8 31 77.4
VMungo1215G2389 Vigna mungo HOM05D000140 ORTHO05D000087 1.3e-06 55.8 31 74.2
A01p17420 Brassica napus HOM05D000140 ORTHO05D000087 1.7e-06 55.5 31 77.4
C01p21940 Brassica napus HOM05D000140 ORTHO05D000087 1.7e-06 55.5 31 77.4
BolC1t02122H Brassica oleracea HOM05D000140 ORTHO05D000087 1.7e-06 55.5 31 77.4
BraA01t01697Z Brassica rapa HOM05D000140 ORTHO05D000087 1.7e-06 55.5 31 77.4
CARHR233660 Cardamine hirsuta HOM05D000140 ORTHO05D000087 1.7e-06 55.5 31 77.4
Ciclev10007531m.g Citrus clementina HOM05D000140 ORTHO05D000087 1.7e-06 55.5 31 74.2
Glyma.09G062900 Glycine max HOM05D000140 ORTHO05D000087 1.7e-06 55.5 30 80.0
Glyma.15G169500 Glycine max HOM05D000140 ORTHO05D000087 1.7e-06 55.5 30 80.0
QL02p062720 Quercus lobata HOM05D000140 ORTHO05D000087 1.7e-06 55.5 31 77.4
TWI32G1241 Tripterygium wilfordii HOM05D000140 ORTHO05D000087 1.7e-06 55.5 31 74.2
VMungo1309G1141 Vigna mungo HOM05D000140 ORTHO05D000087 1.7e-06 55.5 30 80.0
AT3G52840 Arabidopsis thaliana HOM05D000140 ORTHO05D000087 2.2e-06 55.1 31 77.4
BcaB02g08550 Brassica carinata HOM05D000140 ORTHO05D000087 2.2e-06 55.1 31 77.4
BcaC02g09211 Brassica carinata HOM05D000140 ORTHO05D000087 2.2e-06 55.1 31 77.4
A04p06630 Brassica napus HOM05D000140 ORTHO05D000087 2.2e-06 55.1 31 77.4
C04p40080 Brassica napus HOM05D000140 ORTHO05D000087 2.2e-06 55.1 31 77.4
BolC4t25584H Brassica oleracea HOM05D000140 ORTHO05D000087 2.2e-06 55.1 31 77.4
BraA04t16368Z Brassica rapa HOM05D000140 ORTHO05D000087 2.2e-06 55.1 31 77.4
Hund18722 Selenicereus undatus HOM05D000140 ORTHO05D000087 2.2e-06 55.1 31 74.2
EL10Ac8g19221 Beta vulgaris HOM05D000140 ORTHO05D000087 2.9e-06 54.7 31 74.2
COL.COLO4_18204 Corchorus olitorius HOM05D000140 ORTHO05D000087 2.9e-06 54.7 31 74.2
Lalb_Chr07g0180831 Lupinus albus HOM05D000140 ORTHO05D000087 2.9e-06 54.7 31 74.2
MD02G1079200 Malus domestica HOM05D000140 ORTHO05D000087 2.9e-06 54.7 31 77.4
Sp5g09500 Schrenkiella parvula HOM05D000140 ORTHO05D000087 2.9e-06 54.7 31 77.4
THA.LOC104817756 Tarenaya hassleriana HOM05D000140 ORTHO05D000087 2.9e-06 54.7 31 74.2
CiPaw.03G216600 Carya illinoinensis HOM05D000140 ORTHO05D000087 3.7e-06 54.3 31 74.2
Dinv37917 Davidia involucrata HOM05D000140 ORTHO05D000087 3.7e-06 54.3 31 74.2
Thhalv10010152m.g Eutrema salsugineum HOM05D000140 ORTHO05D000087 3.7e-06 54.3 31 74.2
Potri.006G144500 Populus trichocarpa HOM05D000140 ORTHO05D000087 3.7e-06 54.3 31 74.2
Prupe.3G050200 Prunus persica HOM05D000140 ORTHO05D000087 3.7e-06 54.3 31 74.2
PGR102G3122 Punica granatum HOM05D000140 ORTHO05D000087 3.7e-06 54.3 31 74.2
TWI34G0341 Tripterygium wilfordii HOM05D000140 ORTHO05D000087 3.7e-06 54.3 31 74.2
Lj4A307T54 Lonicera japonica HOM05D000140 ORTHO05D000087 4.9e-06 53.9 31 77.4
Sp7g24160 Schrenkiella parvula HOM05D000140 ORTHO05D000087 4.9e-06 53.9 31 74.2
BcaC06g32767 Brassica carinata HOM05D000140 ORTHO05D000087 6.4e-06 53.5 31 74.2
A03p56490 Brassica napus HOM05D000140 ORTHO05D000087 6.4e-06 53.5 31 74.2
C07p54710 Brassica napus HOM05D000140 ORTHO05D000087 6.4e-06 53.5 31 74.2
BolC7t45960H Brassica oleracea HOM05D000140 ORTHO05D000087 6.4e-06 53.5 31 74.2
BraA03t14721Z Brassica rapa HOM05D000140 ORTHO05D000087 6.4e-06 53.5 31 74.2
Eucgr.C00898 Eucalyptus grandis HOM05D000140 ORTHO05D000087 6.4e-06 53.5 31 74.2
Eucgr.C03896 Eucalyptus grandis HOM05D000140 ORTHO05D000087 6.4e-06 53.5 31 74.2
Thhalv10024511m.g Eutrema salsugineum HOM05D000140 ORTHO05D000087 6.4e-06 53.5 31 74.2
Gohir.D01G025940 Gossypium hirsutum HOM05D000140 ORTHO05D000087 6.4e-06 53.5 31 74.2
Gohir.D10G061100 Gossypium hirsutum HOM05D000140 ORTHO05D000087 6.4e-06 53.5 31 74.2
Gorai.011G065300 Gossypium raimondii HOM05D000140 ORTHO05D000087 6.4e-06 53.5 31 74.2
Peaxi162Scf00189g00117 Petunia axillaris HOM05D000140 ORTHO05D000087 6.4e-06 53.5 31 74.2
AL7G26830 Arabidopsis lyrata HOM05D000140 ORTHO05D000087 8.4e-06 53.1 31 74.2
AT4G26140 Arabidopsis thaliana HOM05D000140 ORTHO05D000087 8.4e-06 53.1 31 74.2
BcaB01g04424 Brassica carinata HOM05D000140 ORTHO05D000087 8.4e-06 53.1 31 71.0
BcaB05g22297 Brassica carinata HOM05D000140 ORTHO05D000087 8.4e-06 53.1 31 71.0
BcaC03g14199 Brassica carinata HOM05D000140 ORTHO05D000087 8.4e-06 53.1 31 71.0
A03p13110 Brassica napus HOM05D000140 ORTHO05D000087 8.4e-06 53.1 31 71.0
C02p14830 Brassica napus HOM05D000140 ORTHO05D000087 8.4e-06 53.1 31 71.0
C03p15330 Brassica napus HOM05D000140 ORTHO05D000087 8.4e-06 53.1 31 71.0
BolC1t05031H Brassica oleracea HOM05D000140 ORTHO05D000087 8.4e-06 53.1 31 77.4
BolC2t07613H Brassica oleracea HOM05D000140 ORTHO05D000087 8.4e-06 53.1 31 71.0
BolC3t13975H Brassica oleracea HOM05D000140 ORTHO05D000087 8.4e-06 53.1 31 71.0
BraA03t10621Z Brassica rapa HOM05D000140 ORTHO05D000087 8.4e-06 53.1 31 71.0
CSS0017100 Camellia sinensis var. sinensis HOM05D000140 ORTHO05D000087 8.4e-06 53.1 31 74.2
CSS0021704 Camellia sinensis var. sinensis HOM05D000140 ORTHO05D000087 8.4e-06 53.1 31 74.2
CSS0043562 Camellia sinensis var. sinensis HOM05D000140 ORTHO05D000087 8.4e-06 53.1 31 74.2
CSS0046101 Camellia sinensis var. sinensis HOM05D000140 ORTHO05D000087 8.4e-06 53.1 31 74.2
Carub.0007s1481 Capsella rubella HOM05D000140 ORTHO05D000087 8.4e-06 53.1 31 74.2
Duzib235G0721 Durio zibethinus HOM05D000140 ORTHO05D000087 8.4e-06 53.1 31 74.2
Thhalv10012847m.g Eutrema salsugineum HOM05D000140 ORTHO05D000087 8.4e-06 53.1 31 71.0
Glyma.07G010400 Glycine max HOM05D000140 ORTHO05D000087 8.4e-06 53.1 31 71.0
Glyma.08G193500 Glycine max HOM05D000140 ORTHO05D000087 8.4e-06 53.1 31 71.0
Gohir.A02G115400 Gossypium hirsutum HOM05D000140 ORTHO05D000087 8.4e-06 53.1 31 74.2
Gohir.D03G056400 Gossypium hirsutum HOM05D000140 ORTHO05D000087 8.4e-06 53.1 31 74.2
Lj6g0000453 Lotus japonicus HOM05D000140 ORTHO05D000087 8.4e-06 53.1 30 73.3
Lalb_Chr24g0396351 Lupinus albus HOM05D000140 ORTHO05D000087 8.4e-06 53.1 31 74.2
MD09G1193900 Malus domestica HOM05D000140 ORTHO05D000087 8.4e-06 53.1 31 74.2
Sp6g18590 Schrenkiella parvula HOM05D000140 ORTHO05D000087 8.4e-06 53.1 31 71.0
GSVIVG01016849001 Vitis vinifera HOM05D000140 ORTHO05D000087 8.4e-06 53.1 31 74.2


User provided reference genes

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