Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN18G0540 Fragaria x ananassa HOM05D006197 ORTHO05D007718 1.5e-46 189.1 90 100.0
FAN04G1051 Fragaria x ananassa HOM05D006197 ORTHO05D007718 2.3e-44 181.8 94 94.7
FAN08G0099 Fragaria x ananassa HOM05D006197 ORTHO05D007718 4.0e-44 181.0 90 95.6
FAN13G1034 Fragaria x ananassa HOM05D006197 ORTHO05D007718 5.8e-43 177.2 91 94.5
Prupe.5G046200 Prunus persica HOM05D006197 ORTHO05D007718 2.8e-37 158.3 93 84.9
MD16G1269400 Malus domestica HOM05D006197 ORTHO05D007718 2.3e-36 155.2 96 82.3
Sed0016057 Sechium edule HOM05D006197 ORTHO05D007718 1.1e-33 146.4 93 76.3
GSVIVG01013230001 Vitis vinifera HOM05D006197 ORTHO05D007718 5.4e-33 144.1 98 76.5
RcHm_v2.0_Chr7g0208331 Rosa chinensis HOM05D006197 ORTHO05D007718 1.2e-32 142.9 100 79.0
SalBow1G7863 Salvia bowleyana HOM05D006197 ORTHO05D007718 2.7e-32 141.7 101 72.3
Hma1.2p1_0311F.1_g121310 Hydrangea macrophylla HOM05D006197 ORTHO05D007718 3.5e-32 141.4 101 72.3
Sed0004723 Sechium edule HOM05D006197 ORTHO05D007718 1.0e-31 139.8 100 69.0
CiPaw.11G087500 Carya illinoinensis HOM05D006197 ORTHO05D007718 2.3e-31 138.7 101 72.3
Manes.15G173000 Manihot esculenta HOM05D006197 ORTHO05D007718 2.3e-31 138.7 96 72.9
Duzib068G0126 Durio zibethinus HOM05D006197 ORTHO05D007718 5.1e-31 137.5 94 73.4
Solyc08g077280.1 Solanum lycopersicum HOM05D006197 ORTHO05D007718 6.6e-31 137.1 103 68.9
Nitab4.5_0002055g0120 Nicotiana tabacum HOM05D006197 ORTHO05D007718 8.6e-31 136.7 103 69.9
Dinv28915 Davidia involucrata HOM05D006197 ORTHO05D007718 1.9e-30 135.6 103 69.9
Duzib205G0278 Durio zibethinus HOM05D006197 ORTHO05D007718 1.9e-30 135.6 97 74.2
Gorai.008G229000 Gossypium raimondii HOM05D006197 ORTHO05D007718 1.9e-30 135.6 95 74.7
PGSC0003DMG400024214 Solanum tuberosum HOM05D006197 ORTHO05D007718 3.3e-30 134.8 103 68.9
arahy.Tifrunner.gnm1.ann1.M9L3KI Arachis hypogaea HOM05D006197 ORTHO05D007718 5.6e-30 134.0 105 66.7
arahy.Tifrunner.gnm1.ann1.PC0NS4 Arachis hypogaea HOM05D006197 ORTHO05D007718 5.6e-30 134.0 105 66.7
Eucgr.E00313 Eucalyptus grandis HOM05D006197 ORTHO05D007718 5.6e-30 134.0 98 69.4
Gohir.A04G000300 Gossypium hirsutum HOM05D006197 ORTHO05D007718 5.6e-30 134.0 95 73.7
Sopen05g026900 Solanum pennellii HOM05D006197 ORTHO05D007718 5.6e-30 134.0 103 68.0
Sopen08g025860 Solanum pennellii HOM05D006197 ORTHO05D007718 5.6e-30 134.0 103 68.0
TWI81G0993 Tripterygium wilfordii HOM05D006197 ORTHO05D007718 5.6e-30 134.0 98 70.4
Ciclev10033154m.g Citrus clementina HOM05D006197 ORTHO05D007718 9.5e-30 133.3 103 68.0
Haze_08298 Corylus avellana HOM05D006197 ORTHO05D007718 9.5e-30 133.3 101 71.3
Dinv25183 Davidia involucrata HOM05D002285 ORTHO05D009255 9.5e-30 133.3 103 65.0
Gohir.D08G180000 Gossypium hirsutum HOM05D006197 ORTHO05D007718 9.5e-30 133.3 95 73.7
Gorai.004G188500 Gossypium raimondii HOM05D006197 ORTHO05D007718 9.5e-30 133.3 95 73.7
Cfa012386 Carpinus fangiana HOM05D006197 ORTHO05D007718 1.2e-29 132.9 101 73.3
MBI11_g07528_MAGBIO Magnolia biondii HOM05D006197 ORTHO05D007718 1.2e-29 132.9 102 66.7
Migut.N01790 Erythranthe guttata HOM05D006197 ORTHO05D007718 1.6e-29 132.5 105 71.4
Nitab4.5_0006693g0020 Nicotiana tabacum HOM05D006197 ORTHO05D007718 1.6e-29 132.5 104 69.2
HanXRQChr08g0234831 Helianthus annuus HOM05D006197 ORTHO05D007718 2.1e-29 132.1 107 68.2
CANSAT64G2368 Cannabis sativa HOM05D006197 ORTHO05D007718 2.8e-29 131.7 107 66.4
Cpa.g.sc6.409 Carica papaya HOM05D006197 ORTHO05D007718 2.8e-29 131.7 93 73.1
CsaV3_3G049530 Cucumis sativus L. HOM05D006197 ORTHO05D007718 2.8e-29 131.7 100 66.0
Gohir.A08G159600 Gossypium hirsutum HOM05D006197 ORTHO05D007718 2.8e-29 131.7 95 72.6
COL.COLO4_17110 Corchorus olitorius HOM05D006197 ORTHO05D007718 3.6e-29 131.3 94 70.2
MELO3C003373.2 Cucumis melo HOM05D006197 ORTHO05D007718 3.6e-29 131.3 101 65.3
MBI02_g29718_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D009071 3.6e-29 131.3 98 67.3
Peaxi162Scf00084g00099 Petunia axillaris HOM05D006197 ORTHO05D007718 3.6e-29 131.3 93 75.3
DCAR_008300 Daucus carota HOM05D006197 ORTHO05D007718 4.7e-29 131.0 100 69.0
Cc08_g01810 Coffea canephora HOM05D006197 ORTHO05D007718 6.2e-29 130.6 103 68.9
Lsat_1_v5_gn_6_66400 Lactuca sativa HOM05D006197 ORTHO05D007718 6.2e-29 130.6 111 63.1
PGR042G3581 Punica granatum HOM05D006197 ORTHO05D007718 6.2e-29 130.6 100 71.0
Atru.chr6.1773 Acer truncatum HOM05D006197 ORTHO05D007718 8.1e-29 130.2 98 68.4
Cc00_g23310 Coffea canephora HOM05D006197 ORTHO05D007718 8.1e-29 130.2 103 68.0
Cc00_g30230 Coffea canephora HOM05D006197 ORTHO05D007718 8.1e-29 130.2 103 68.9
QL12p007107 Quercus lobata HOM05D006197 ORTHO05D007718 8.1e-29 130.2 103 66.0
Thecc.03G234100 Theobroma cacao HOM05D006197 ORTHO05D007718 8.1e-29 130.2 94 71.3
CSS0031892 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 1.4e-28 129.4 107 66.4
CSS0033989 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 1.4e-28 129.4 107 66.4
CSS0037645 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 1.4e-28 129.4 107 66.4
Gohir.D12G213400 Gossypium hirsutum HOM05D006197 ORTHO05D007718 1.4e-28 129.4 95 71.6
Cc00_g26570 Coffea canephora HOM05D006197 ORTHO05D007718 1.8e-28 129.0 103 67.0
ECA240G0414 Erigeron canadensis HOM05D006197 ORTHO05D007718 5.2e-28 127.5 110 65.5
Potri.001G146700 Populus trichocarpa HOM05D006197 ORTHO05D007718 8.9e-28 126.7 99 66.7
Thhalv10006335m.g Eutrema salsugineum HOM05D006197 ORTHO05D007718 1.2e-27 126.3 100 64.0
Rhsim11G0011100 Rhododendron simsii HOM05D006197 ORTHO05D007718 1.2e-27 126.3 100 63.0
BcaC07g40556 Brassica carinata HOM05D006197 ORTHO05D007718 1.5e-27 125.9 95 66.3
A09p52120 Brassica napus HOM05D006197 ORTHO05D007718 1.5e-27 125.9 95 66.3
BcaC07g40434 Brassica carinata HOM05D006197 ORTHO05D007718 2.0e-27 125.6 95 66.3
AUR62007231 Chenopodium quinoa HOM05D006197 ORTHO05D007718 2.0e-27 125.6 98 72.4
TWI15G0656 Tripterygium wilfordii HOM05D006197 ORTHO05D007718 2.0e-27 125.6 100 69.0
BcaC08g45013 Brassica carinata HOM05D006197 ORTHO05D007718 2.6e-27 125.2 95 66.3
BolC6t37808H Brassica oleracea HOM05D006197 ORTHO05D007718 2.6e-27 125.2 95 66.3
Nn1g03717 Nelumbo nucifera HOM05D006197 ORTHO05D007718 2.6e-27 125.2 96 67.7
Oeu014592.2 Olea europaea HOM05D006197 ORTHO05D007718 3.4e-27 124.8 104 65.4
C06p26450 Brassica napus HOM05D006197 ORTHO05D007718 5.8e-27 124.0 95 65.3
AUR62018769 Chenopodium quinoa HOM05D006197 ORTHO05D007718 5.8e-27 124.0 98 70.4
BcaB02g07441 Brassica carinata HOM05D006197 ORTHO05D007718 7.5e-27 123.6 100 62.0
Oeu006551.1 Olea europaea HOM05D006197 ORTHO05D007718 7.5e-27 123.6 103 66.0
A07p24860 Brassica napus HOM05D006197 ORTHO05D007718 9.9e-27 123.2 96 65.6
BraA07t30130Z Brassica rapa HOM05D006197 ORTHO05D007718 9.9e-27 123.2 96 65.6
Aqoxy1G03814 Aquilegia oxysepala HOM05D006197 ORTHO05D007718 1.7e-26 122.5 104 62.5
Lalb_Chr09g0323941 Lupinus albus HOM05D006197 ORTHO05D007718 1.7e-26 122.5 118 57.6
Actinidia03393 Actinidia chinensis HOM05D004955 ORTHO05D005965 2.2e-26 122.1 86 74.4
Ca_24632_v3 Cicer arietinum L. HOM05D006197 ORTHO05D007718 2.2e-26 122.1 102 63.7
Aa31LG10G14080 Aethionema arabicum HOM05D006197 ORTHO05D007718 2.9e-26 121.7 99 62.6
CARHR170180 Cardamine hirsuta HOM05D006197 ORTHO05D007718 2.9e-26 121.7 95 65.3
Glyma.11G041000 Glycine max HOM05D006197 ORTHO05D007718 2.9e-26 121.7 100 65.0
AL5G41940 Arabidopsis lyrata HOM05D006197 ORTHO05D007718 3.7e-26 121.3 99 61.6
AT3G59840 Arabidopsis thaliana HOM05D006197 ORTHO05D007718 3.7e-26 121.3 99 61.6
Carub.0005s2656 Capsella rubella HOM05D006197 ORTHO05D007718 3.7e-26 121.3 99 61.6
THA.LOC104819961 Tarenaya hassleriana HOM05D006197 ORTHO05D007718 3.7e-26 121.3 101 61.4
Cc00_g31810 Coffea canephora HOM05D006197 ORTHO05D007718 1.1e-25 119.8 89 71.9
Sabra01G0115400 Salix brachista HOM05D006197 ORTHO05D007718 1.1e-25 119.8 100 65.0
VMungo1215G1228 Vigna mungo HOM05D006197 ORTHO05D007718 1.1e-25 119.8 103 65.0
Lj2g0021118 Lotus japonicus HOM05D006197 ORTHO05D007718 1.4e-25 119.4 100 65.0
Sp5g03300 Schrenkiella parvula HOM05D006197 ORTHO05D007718 2.4e-25 118.6 100 62.0
PSO210G4997 Papaver somniferum HOM05D006197 ORTHO05D007718 3.2e-25 118.2 99 65.7
PSO832G1675 Papaver somniferum HOM05D006197 ORTHO05D007718 3.2e-25 118.2 99 65.7
Phvul.002G004500 Phaseolus vulgaris HOM05D006197 ORTHO05D007718 7.1e-25 117.1 103 63.1
EL10Ac5g12195 Beta vulgaris HOM05D006197 ORTHO05D007718 1.2e-24 116.3 95 67.4
Medtr5g013975 Medicago truncatula HOM05D006197 ORTHO05D007718 1.2e-24 116.3 106 62.3
TAR624G0346 Trochodendron aralioides HOM05D006197 ORTHO05D007718 1.2e-24 116.3 97 59.8
Ah.12g053650 Amaranthus hybridus HOM05D006197 ORTHO05D007718 1.6e-24 115.9 93 67.7
VMungo1215G3393 Vigna mungo HOM05D006197 ORTHO05D007718 2.1e-24 115.5 104 63.5
Glyma.01G201200 Glycine max HOM05D006197 ORTHO05D007718 2.7e-24 115.2 105 62.9
unitig_747.g21291 Utricularia gibba HOM05D006197 ORTHO05D007718 4.6e-24 114.4 102 58.8
Psat2g174760 Pisum sativum HOM05D006197 ORTHO05D007718 1.0e-23 113.2 103 60.2
Cc08_g02050 Coffea canephora HOM05D006197 ORTHO05D007718 5.1e-23 110.9 67 83.6
Cc08_g01990 Coffea canephora HOM05D006197 ORTHO05D007718 8.6e-23 110.2 67 82.1
Sc01g0007760 Simmondsia chinensis HOM05D006197 ORTHO05D007718 2.5e-22 108.6 63 84.1
BolC8t51081H Brassica oleracea HOM05D000403 ORTHO05D004426 7.3e-22 107.1 83 63.9
Duzib084G1370 Durio zibethinus HOM05D006197 ORTHO05D007718 1.1e-20 103.2 94 61.7
ATR1088G052 Amborella trichopoda HOM05D006197 ORTHO05D007718 1.4e-20 102.8 106 55.7
TPR.G6747 Trifolium pratense HOM05D006197 ORTHO05D007718 1.4e-20 102.8 62 79.0
Cc08_g01910 Coffea canephora HOM05D006197 ORTHO05D007718 1.8e-20 102.4 90 61.1
Phvul.002G003700 Phaseolus vulgaris HOM05D006197 ORTHO05D007718 2.4e-20 102.1 103 56.3
Os05g0500450 Oryza sativa ssp. japonica HOM05D006197 ORTHO05D007718 9.9e-19 96.7 102 52.0
Nn1g08520 Nelumbo nucifera HOM05D006197 ORTHO05D007718 1.2e-16 89.7 95 54.7
AagrBONN_evm.TU.Sc2ySwM_368.296 Anthoceros agrestis HOM05D006197 ORTHO05D007718 3.9e-15 84.7 74 52.7
Eucgr.C01972 Eucalyptus grandis HOM05D006197 ORTHO05D007718 6.6e-15 84.0 70 58.6
CBR_g8168 Chara braunii HOM05D006197 ORTHO05D007718 4.3e-14 81.3 55 67.3
CAN.G799.18 Capsicum annuum HOM05D006197 ORTHO05D007718 7.3e-14 80.5 55 72.7
Pp3c14_9970 Physcomitrium patens HOM05D006197 ORTHO05D007718 7.3e-14 80.5 81 53.1
Mapoly0127s0016 Marchantia polymorpha HOM05D006197 ORTHO05D007718 2.1e-13 79.0 68 54.4
Mapoly0046s0110 Marchantia polymorpha HOM05D006197 ORTHO05D007718 1.4e-12 76.3 55 60.0
SMO119G0374 Selaginella moellendorffii HOM05D006197 ORTHO05D007718 1.5e-11 72.8 89 51.7
Cc08_g01940 Coffea canephora HOM05D000011 ORTHO05D000157 1.1e-09 66.6 32 87.5
Migut.E01523 Erythranthe guttata HOM05D006197 ORTHO05D007718 7.1e-09 63.9 71 52.1
Migut.E01526 Erythranthe guttata HOM05D006197 ORTHO05D007718 9.3e-09 63.5 71 50.7
TPR.G6988 Trifolium pratense HOM05D006197 ORTHO05D007718 5.1e-07 57.8 60 56.7


User provided reference genes

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