Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN18G0503 Fragaria x ananassa HOM05D002400 ORTHO05D002568 7.5e-55 216.9 103 100.0
FvH4_5g26390 Fragaria vesca HOM05D002400 ORTHO05D002568 1.4e-45 186.0 92 96.7
RcHm_v2.0_Chr7g0217271 Rosa chinensis HOM05D002400 ORTHO05D002568 2.6e-39 165.2 91 85.7
FvH4_5g26410 Fragaria vesca HOM05D002400 ORTHO05D002568 1.9e-37 159.1 90 83.3
FAN18G2424 Fragaria x ananassa HOM05D002400 ORTHO05D002568 4.1e-37 157.9 90 82.2
MD04G1058800 Malus domestica HOM05D002400 ORTHO05D002568 2.4e-21 105.5 89 57.3
FAN18G1895 Fragaria x ananassa HOM05D002400 ORTHO05D002568 4.2e-21 104.8 69 71.0
RcHm_v2.0_Chr7g0205891 Rosa chinensis HOM05D002400 ORTHO05D002568 4.6e-20 101.3 90 53.3
FAN18G4571 Fragaria x ananassa HOM05D002400 ORTHO05D002568 6.0e-20 100.9 87 58.6
FvH4_5g20530 Fragaria vesca HOM05D002400 ORTHO05D002568 1.7e-19 99.4 87 57.5
RcHm_v2.0_Chr7g0205961 Rosa chinensis HOM05D002400 ORTHO05D002568 6.6e-19 97.4 86 54.7
RcHm_v2.0_Chr3g0474021 Rosa chinensis HOM05D002400 ORTHO05D002568 8.7e-19 97.1 99 47.5
FAN08G1360 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.5e-18 96.3 102 48.0
FAN18G0377 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.3e-17 93.2 86 54.7
FvH4_6g19020 Fragaria vesca HOM05D002400 ORTHO05D002568 1.6e-17 92.8 103 47.6
FAN02G4410 Fragaria x ananassa HOM05D002400 ORTHO05D002568 2.1e-17 92.4 99 49.5
FAN04G2586 Fragaria x ananassa HOM05D002400 ORTHO05D002568 4.8e-17 91.3 89 50.6
Prupe.7G108600 Prunus persica HOM05D002400 ORTHO05D002568 6.2e-17 90.9 87 51.7
RcHm_v2.0_Chr3g0474001 Rosa chinensis HOM05D002400 ORTHO05D002568 6.2e-17 90.9 98 45.9
MD14G1024100 Malus domestica HOM05D002400 ORTHO05D002568 1.1e-16 90.1 91 48.4
Prupe.7G105000 Prunus persica HOM05D002400 ORTHO05D002568 2.4e-16 89.0 86 52.3
FAN05G4425 Fragaria x ananassa HOM05D002400 ORTHO05D002568 5.3e-16 87.8 98 45.9
MD14G1026000 Malus domestica HOM05D002400 ORTHO05D002568 5.3e-16 87.8 93 50.5
RcHm_v2.0_Chr3g0474141 Rosa chinensis HOM05D002400 ORTHO05D002568 5.3e-16 87.8 84 52.4
MD14G1026600 Malus domestica HOM05D002400 ORTHO05D002568 1.5e-15 86.3 88 50.0
RcHm_v2.0_Chr3g0474111 Rosa chinensis HOM05D002400 ORTHO05D002568 1.5e-15 86.3 84 51.2
RcHm_v2.0_Chr3g0474191 Rosa chinensis HOM05D002400 ORTHO05D002568 2.0e-15 85.9 106 43.4
FAN09G1471 Fragaria x ananassa HOM05D002400 ORTHO05D002568 2.6e-15 85.5 103 47.6
MD12G1202000 Malus domestica HOM05D002400 ORTHO05D002568 3.4e-15 85.1 85 52.9
RcHm_v2.0_Chr3g0474161 Rosa chinensis HOM05D002400 ORTHO05D002568 3.4e-15 85.1 79 51.9
FAN08G0492 Fragaria x ananassa HOM05D002400 ORTHO05D002568 5.8e-15 84.3 55 72.7
Prupe.7G106200 Prunus persica HOM05D002400 ORTHO05D002568 5.8e-15 84.3 76 52.6
RcHm_v2.0_Chr3g0474091 Rosa chinensis HOM05D002400 ORTHO05D002568 9.9e-15 83.6 83 50.6
FAN14G3084 Fragaria x ananassa HOM05D002400 ORTHO05D002568 2.2e-14 82.4 78 48.7
RcHm_v2.0_Chr3g0473911 Rosa chinensis HOM05D002400 ORTHO05D002568 2.2e-14 82.4 85 49.4
FvH4_6g33960 Fragaria vesca HOM05D002400 ORTHO05D002568 2.9e-14 82.0 79 49.4
FAN09G2665 Fragaria x ananassa HOM05D002400 ORTHO05D002568 2.9e-14 82.0 98 43.9
FvH4_6g19010 Fragaria vesca HOM05D002400 ORTHO05D002568 3.8e-14 81.6 98 44.9
RcHm_v2.0_Chr3g0474171 Rosa chinensis HOM05D002400 ORTHO05D002568 3.8e-14 81.6 78 50.0
MD12G1025400 Malus domestica HOM05D002400 ORTHO05D002568 4.9e-14 81.3 76 51.3
Prupe.7G105900 Prunus persica HOM05D002400 ORTHO05D002568 4.9e-14 81.3 81 51.9
RcHm_v2.0_Chr3g0474131 Rosa chinensis HOM05D002400 ORTHO05D002568 4.9e-14 81.3 79 51.9
FAN02G2106 Fragaria x ananassa HOM05D002400 ORTHO05D002568 6.4e-14 80.9 78 51.3
MD14G1026700 Malus domestica HOM05D002400 ORTHO05D002568 8.4e-14 80.5 94 44.7
Prupe.7G105500 Prunus persica HOM05D002400 ORTHO05D002568 1.1e-13 80.1 81 51.9
FAN04G0043 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.4e-13 79.7 55 69.1
MD14G1025100 Malus domestica HOM05D002400 ORTHO05D002568 1.4e-13 79.7 106 41.5
MD14G1025600 Malus domestica HOM05D002400 ORTHO05D002568 1.4e-13 79.7 102 42.2
Prupe.7G104800 Prunus persica HOM05D002400 ORTHO05D002568 3.2e-13 78.6 82 50.0
FAN05G4159 Fragaria x ananassa HOM05D002400 ORTHO05D002568 4.2e-13 78.2 79 50.6
MD12G1026800 Malus domestica HOM05D002400 ORTHO05D002568 4.2e-13 78.2 94 46.8
RcHm_v2.0_Chr3g0475381 Rosa chinensis HOM05D002400 ORTHO05D002568 4.2e-13 78.2 78 47.4
RcHm_v2.0_Chr5g0068981 Rosa chinensis HOM05D002400 ORTHO05D002568 5.4e-13 77.8 74 50.0
RcHm_v2.0_Chr5g0069001 Rosa chinensis HOM05D002400 ORTHO05D002568 5.4e-13 77.8 81 46.9
MD14G1026400 Malus domestica HOM05D002400 ORTHO05D002568 7.1e-13 77.4 85 52.9
Prupe.5G196300 Prunus persica HOM05D002400 ORTHO05D002568 7.1e-13 77.4 77 48.1
FvH4_6g18954 Fragaria vesca HOM05D002400 ORTHO05D002568 9.3e-13 77.0 83 48.2
FvH4_6g18920 Fragaria vesca HOM05D002400 ORTHO05D002568 1.2e-12 76.6 85 47.1
MD14G1157200 Malus domestica HOM05D002400 ORTHO05D002568 1.2e-12 76.6 84 47.6
FvH4_6g22710 Fragaria vesca HOM05D002400 ORTHO05D002568 1.6e-12 76.3 81 40.7
MD14G1026300 Malus domestica HOM05D002400 ORTHO05D002568 1.6e-12 76.3 90 48.9
RcHm_v2.0_Chr3g0473961 Rosa chinensis HOM05D002400 ORTHO05D002568 2.1e-12 75.9 91 44.0
FvH4_6g19361 Fragaria vesca HOM05D002400 ORTHO05D002568 2.7e-12 75.5 82 47.6
FAN14G2794 Fragaria x ananassa HOM05D002400 ORTHO05D002568 2.7e-12 75.5 82 40.2
FAN14G5714 Fragaria x ananassa HOM05D002400 ORTHO05D002568 3.5e-12 75.1 82 47.6
RcHm_v2.0_Chr3g0474031 Rosa chinensis HOM05D002400 ORTHO05D002568 4.6e-12 74.7 80 50.0
FAN09G3427 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.0e-11 73.6 82 40.2
MD00G1221800 Malus domestica HOM05D002400 ORTHO05D002568 1.0e-11 73.6 75 45.3
FAN05G0221 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.3e-11 73.2 82 39.0
MD04G1145900 Malus domestica HOM05D002400 ORTHO05D002568 1.3e-11 73.2 100 46.0
MD14G1025200 Malus domestica HOM05D002400 ORTHO05D002568 1.3e-11 73.2 85 47.1
FvH4_6g19090 Fragaria vesca HOM05D002400 ORTHO05D002568 1.7e-11 72.8 82 48.8
FAN14G5260 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.7e-11 72.8 82 39.0
MD12G1026500 Malus domestica HOM05D002400 ORTHO05D002568 3.0e-11 72.0 75 45.3
Prupe.7G106400 Prunus persica HOM05D002400 ORTHO05D002568 3.9e-11 71.6 102 43.1
FAN14G2096 Fragaria x ananassa HOM05D002400 ORTHO05D002568 5.1e-11 71.2 79 48.1
FAN14G5794 Fragaria x ananassa HOM05D002400 ORTHO05D002568 6.6e-11 70.9 78 48.7
Prupe.1G551800 Prunus persica HOM05D002400 ORTHO05D002568 6.6e-11 70.9 78 44.9
FAN04G3210 Fragaria x ananassa HOM05D002400 ORTHO05D002568 8.7e-11 70.5 63 57.1
FAN02G2515 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.1e-10 70.1 76 39.5
FAN06G0647 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.1e-10 70.1 84 40.5
MD14G1025400 Malus domestica HOM05D002400 ORTHO05D002568 1.1e-10 70.1 91 41.8
RcHm_v2.0_Chr3g0475391 Rosa chinensis HOM05D002400 ORTHO05D002568 1.1e-10 70.1 79 46.8
vmacro12117 Vaccinium macrocarpon HOM05D002400 ORTHO05D002568 1.1e-10 70.1 80 45.0
Prupe.2G052100 Prunus persica HOM05D002400 ORTHO05D002568 1.5e-10 69.7 77 48.1
RcHm_v2.0_Chr3g0474041 Rosa chinensis HOM05D002400 ORTHO05D002568 1.9e-10 69.3 80 42.5
FvH4_6g18952 Fragaria vesca HOM05D002400 ORTHO05D002568 2.5e-10 68.9 79 39.2
FvH4_6g19370 Fragaria vesca HOM05D002400 ORTHO05D002568 2.5e-10 68.9 78 52.6
FAN14G5775 Fragaria x ananassa HOM05D002400 ORTHO05D002568 2.5e-10 68.9 78 52.6
MD14G1025800 Malus domestica HOM05D002400 ORTHO05D002568 2.5e-10 68.9 83 41.0
vmacro12123 Vaccinium macrocarpon HOM05D002400 ORTHO05D002568 2.5e-10 68.9 80 42.5
RcHm_v2.0_Chr3g0474181 Rosa chinensis HOM05D002400 ORTHO05D002568 3.3e-10 68.6 70 52.9
FvH4_6g19030 Fragaria vesca HOM05D002400 ORTHO05D002568 4.3e-10 68.2 80 50.0
MD14G1025300 Malus domestica HOM05D002400 ORTHO05D002568 4.3e-10 68.2 86 40.7
FvH4_6g33920 Fragaria vesca HOM05D002400 ORTHO05D002568 5.6e-10 67.8 105 37.1
FAN14G5626 Fragaria x ananassa HOM05D002400 ORTHO05D002568 5.6e-10 67.8 105 37.1
MD14G1026200 Malus domestica HOM05D002400 ORTHO05D002568 5.6e-10 67.8 75 49.3
FvH4_6g18961 Fragaria vesca HOM05D002400 ORTHO05D002568 7.3e-10 67.4 77 44.2
FvH4_1g23521 Fragaria vesca HOM05D002400 ORTHO05D002568 9.6e-10 67.0 103 35.9
MD02G1269000 Malus domestica HOM05D002400 ORTHO05D002568 9.6e-10 67.0 76 50.0
FvH4_7g12363 Fragaria vesca HOM05D002400 ORTHO05D002568 1.3e-09 66.6 68 44.1
FAN06G2837 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.3e-09 66.6 78 42.3
FAN19G0352 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.3e-09 66.6 77 44.2
RcHm_v2.0_Chr1g0330111 Rosa chinensis HOM05D002400 ORTHO05D002568 1.3e-09 66.6 77 46.8
FAN08G3505 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.6e-09 66.2 87 46.0
FAN15G2585 Fragaria x ananassa HOM05D045789 ORTHO05D002568 1.6e-09 66.2 65 49.2
FAN15G2963 Fragaria x ananassa HOM05D045789 ORTHO05D002568 1.6e-09 66.2 65 49.2
Prupe.6G269600 Prunus persica HOM05D002400 ORTHO05D002568 2.1e-09 65.9 89 49.4
FvH4_6g33902 Fragaria vesca HOM05D002400 ORTHO05D002568 2.8e-09 65.5 64 42.2
MD14G1024900 Malus domestica HOM05D002400 ORTHO05D002568 2.8e-09 65.5 101 35.6
QL02p059625 Quercus lobata HOM05D002400 ORTHO05D002568 2.8e-09 65.5 81 43.2
FvH4_6g18911 Fragaria vesca HOM05D002400 ORTHO05D002568 3.6e-09 65.1 82 45.1
FvH4_6g19040 Fragaria vesca HOM05D002400 ORTHO05D002568 3.6e-09 65.1 80 37.5
vmacro05682 Vaccinium macrocarpon HOM05D002400 ORTHO05D002568 3.6e-09 65.1 80 45.0
FvH4_6g19051 Fragaria vesca HOM05D002400 ORTHO05D002568 4.8e-09 64.7 80 38.8
Prupe.6G311500 Prunus persica HOM05D002400 ORTHO05D002568 4.8e-09 64.7 86 43.0
FvH4_7g04740 Fragaria vesca HOM05D002400 ORTHO05D002568 6.2e-09 64.3 54 53.7
FAN03G0307 Fragaria x ananassa HOM05D002400 ORTHO05D002568 6.2e-09 64.3 54 53.7
FAN06G1414 Fragaria x ananassa HOM05D002400 ORTHO05D002568 6.2e-09 64.3 54 53.7
Dinv05457 Davidia involucrata HOM05D002400 ORTHO05D002568 8.1e-09 63.9 81 43.2
FAN05G2917 Fragaria x ananassa HOM05D002400 ORTHO05D002568 8.1e-09 63.9 82 40.2
FvH4_6g18950 Fragaria vesca HOM05D002400 ORTHO05D002568 1.4e-08 63.2 84 39.3
FAN06G5021 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.4e-08 63.2 86 38.4
FAN09G4054 Fragaria x ananassa HOM05D002400 ORTHO05D002568 2.4e-08 62.4 61 44.3
FvH4_5g29160 Fragaria vesca HOM05D002400 ORTHO05D002568 3.1e-08 62.0 68 50.0
FvH4_5g32301 Fragaria vesca HOM05D002400 ORTHO05D002568 3.1e-08 62.0 87 43.7
FAN02G3141 Fragaria x ananassa HOM05D002400 ORTHO05D002568 3.1e-08 62.0 77 40.3
FAN08G1320 Fragaria x ananassa HOM05D002400 ORTHO05D002568 3.1e-08 62.0 68 50.0
FAN18G0337 Fragaria x ananassa HOM05D002400 ORTHO05D002568 3.1e-08 62.0 65 49.2
MD12G1201900 Malus domestica HOM05D002400 ORTHO05D002568 3.1e-08 62.0 84 41.7
FvH4_7g09171 Fragaria vesca HOM05D000003 ORTHO05D002568 4.0e-08 61.6 77 40.3
FAN08G3191 Fragaria x ananassa HOM05D002400 ORTHO05D045931 4.0e-08 61.6 48 60.4
MD12G1217700 Malus domestica HOM05D002400 ORTHO05D002568 5.3e-08 61.2 83 41.0
FAN18G0208 Fragaria x ananassa HOM05D002400 ORTHO05D002568 6.9e-08 60.8 79 44.3
vmacro05683 Vaccinium macrocarpon HOM05D002400 ORTHO05D002568 6.9e-08 60.8 74 40.5
FvH4_6g05280 Fragaria vesca HOM05D002400 ORTHO05D002568 9.0e-08 60.5 85 36.5
FAN14G3389 Fragaria x ananassa HOM05D002400 ORTHO05D002568 9.0e-08 60.5 85 36.5
FAN14G5637 Fragaria x ananassa HOM05D002400 ORTHO05D002568 9.0e-08 60.5 85 36.5
MD04G1145400 Malus domestica HOM05D002400 ORTHO05D002568 9.0e-08 60.5 48 60.4
FAN05G1326 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.2e-07 60.1 84 39.3
FAN04G1392 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.5e-07 59.7 68 48.5
FAN05G2957 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.5e-07 59.7 60 50.0
FvH4_5g31730 Fragaria vesca HOM05D002400 ORTHO05D002568 2.0e-07 59.3 39 71.8
FvH4_6g08300 Fragaria vesca HOM05D002400 ORTHO05D002568 2.0e-07 59.3 73 41.1
FAN05G0305 Fragaria x ananassa HOM05D002400 ORTHO05D002568 2.0e-07 59.3 70 38.6
FAN14G3017 Fragaria x ananassa HOM05D002400 ORTHO05D002568 2.0e-07 59.3 73 41.1
FAN09G1480 Fragaria x ananassa HOM05D002400 ORTHO05D002568 2.6e-07 58.9 76 38.2
FAN13G2944 Fragaria x ananassa HOM05D002400 ORTHO05D002568 2.6e-07 58.9 58 51.7
FAN14G4887 Fragaria x ananassa HOM05D002400 ORTHO05D002568 2.6e-07 58.9 62 46.8
MD12G1217800 Malus domestica HOM05D002400 ORTHO05D002568 2.6e-07 58.9 82 40.2
RcHm_v2.0_Chr3g0481121 Rosa chinensis HOM05D002400 ORTHO05D002568 2.6e-07 58.9 81 37.0
FAN05G2337 Fragaria x ananassa HOM05D002400 ORTHO05D002568 4.5e-07 58.2 63 41.3
FAN10G1459 Fragaria x ananassa HOM05D002400 ORTHO05D002568 4.5e-07 58.2 52 50.0
Haze_04784 Corylus avellana HOM05D002400 ORTHO05D002568 5.8e-07 57.8 76 39.5
FAN05G1596 Fragaria x ananassa HOM05D002400 ORTHO05D002568 5.8e-07 57.8 78 35.9
FAN13G3133 Fragaria x ananassa HOM05D002400 ORTHO05D002568 7.6e-07 57.4 36 66.7
Dinv05456 Davidia involucrata HOM05D002400 ORTHO05D002568 1.3e-06 56.6 85 36.5
RcHm_v2.0_Chr3g0458171 Rosa chinensis HOM05D002400 ORTHO05D002568 1.3e-06 56.6 52 48.1
FvH4_6g18982 Fragaria vesca HOM05D002400 ORTHO05D002568 1.7e-06 56.2 93 38.7
Haze_04775 Corylus avellana HOM05D002400 ORTHO05D002568 2.2e-06 55.8 68 42.6
Dinv02723 Davidia involucrata HOM05D002400 ORTHO05D002568 2.2e-06 55.8 81 38.3
FAN05G1294 Fragaria x ananassa HOM05D002400 ORTHO05D002568 2.2e-06 55.8 57 43.9
FAN06G4070 Fragaria x ananassa HOM05D002400 ORTHO05D002568 2.9e-06 55.5 54 50.0
Manes.09G032300 Manihot esculenta HOM05D002400 ORTHO05D002568 2.9e-06 55.5 52 51.9
Dinv02727 Davidia involucrata HOM05D002400 ORTHO05D002568 4.9e-06 54.7 85 35.3
Cfa005419 Carpinus fangiana HOM05D002400 ORTHO05D002568 6.4e-06 54.3 88 37.5


User provided reference genes

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