Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN18G0435 Fragaria x ananassa HOM05D017100 ORTHO05D008036 4.8e-39 164.5 111 100.0
FAN18G2618 Fragaria x ananassa HOM05D017100 ORTHO05D008036 3.4e-37 158.3 86 95.3
FAN13G1599 Fragaria x ananassa HOM05D017100 ORTHO05D008036 4.5e-37 157.9 111 86.5
FvH4_5g04090 Fragaria vesca HOM05D017100 ORTHO05D008036 2.2e-36 155.6 86 98.8
FAN04G1004 Fragaria x ananassa HOM05D017100 ORTHO05D008036 7.6e-29 130.6 75 86.7
FAN04G2843 Fragaria x ananassa HOM05D017100 ORTHO05D008036 7.6e-29 130.6 75 86.7
FAN08G3467 Fragaria x ananassa HOM05D017100 ORTHO05D008036 2.2e-28 129.0 84 78.6
RcHm_v2.0_Chr7g0195411 Rosa chinensis HOM05D017100 ORTHO05D008036 4.3e-24 114.8 75 80.0
Prupe.5G115500 Prunus persica HOM05D007041 ORTHO05D008036 2.7e-10 68.9 86 44.2
Gohir.A12G234950 Gossypium hirsutum HOM05D007041 ORTHO05D008036 1.9e-08 62.8 31 83.9
Gohir.D12G236050 Gossypium hirsutum HOM05D007041 ORTHO05D008036 1.9e-08 62.8 31 83.9
Gorai.008G252800 Gossypium raimondii HOM05D007041 ORTHO05D008036 1.9e-08 62.8 31 83.9
Thecc.03G293400 Theobroma cacao HOM05D007041 ORTHO05D008036 3.3e-08 62.0 31 83.9
CiPaw.12G084900 Carya illinoinensis HOM05D007041 ORTHO05D008036 4.8e-07 58.2 30 76.7
CSS0039531 Camellia sinensis var. sinensis HOM05D007041 ORTHO05D008036 6.3e-07 57.8 33 66.7
Potri.003G137600 Populus trichocarpa HOM05D007041 ORTHO05D008036 6.3e-07 57.8 31 67.7
CSS0019600 Camellia sinensis var. sinensis HOM05D007041 ORTHO05D008036 8.2e-07 57.4 32 71.9
CSS0049473 Camellia sinensis var. sinensis HOM05D007041 ORTHO05D008036 1.1e-06 57.0 31 74.2
QL02p031389 Quercus lobata HOM05D007041 ORTHO05D008036 1.4e-06 56.6 29 79.3
Rhsim01G0170200 Rhododendron simsii HOM05D007041 ORTHO05D008036 1.4e-06 56.6 30 70.0
vmacro22515 Vaccinium macrocarpon HOM05D007041 ORTHO05D008036 1.4e-06 56.6 30 70.0
vmacro22516 Vaccinium macrocarpon HOM05D007041 ORTHO05D008036 1.4e-06 56.6 30 70.0
vmacro22517 Vaccinium macrocarpon HOM05D007041 ORTHO05D008036 1.4e-06 56.6 30 70.0
FvH4_7g16050 Fragaria vesca HOM05D007041 ORTHO05D008036 2.4e-06 55.8 29 79.3
FAN06G2039 Fragaria x ananassa HOM05D007041 ORTHO05D008036 2.4e-06 55.8 29 79.3
FAN06G3979 Fragaria x ananassa HOM05D007041 ORTHO05D008036 2.4e-06 55.8 29 79.3
FAN10G1361 Fragaria x ananassa HOM05D007041 ORTHO05D008036 2.4e-06 55.8 29 79.3
FAN10G2988 Fragaria x ananassa HOM05D007041 ORTHO05D008036 2.4e-06 55.8 29 79.3
Rhsim07G0006100 Rhododendron simsii HOM05D000337 ORTHO05D000297 2.4e-06 55.8 66 37.9
RcHm_v2.0_Chr1g0358991 Rosa chinensis HOM05D007041 ORTHO05D008036 2.4e-06 55.8 29 79.3
MD07G1146000 Malus domestica HOM05D007041 ORTHO05D008036 3.1e-06 55.5 29 75.9
Potri.001G094000 Populus trichocarpa HOM05D007041 ORTHO05D008036 3.1e-06 55.5 31 67.7
Manes.02G012400 Manihot esculenta HOM05D007041 ORTHO05D008036 5.3e-06 54.7 29 72.4
Actinidia28494 Actinidia chinensis HOM05D000017 ORTHO05D008036 6.9e-06 54.3 36 58.3
EL10Ac1g00306 Beta vulgaris HOM05D007041 ORTHO05D008036 6.9e-06 54.3 30 70.0
COL.COLO4_06320 Corchorus olitorius HOM05D007041 ORTHO05D008036 6.9e-06 54.3 29 75.9
FAN03G1744 Fragaria x ananassa HOM05D007041 ORTHO05D008036 6.9e-06 54.3 29 75.9
Prupe.2G184300 Prunus persica HOM05D007041 ORTHO05D008036 6.9e-06 54.3 29 72.4
Rhsim01G0170500 Rhododendron simsii HOM05D007041 ORTHO05D008036 6.9e-06 54.3 84 33.3


User provided reference genes

Program Settings