Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN18G0250 Fragaria x ananassa HOM05D008495 ORTHO05D012517 4.7e-61 237.7 117 100.0
FvH4_5g11090 Fragaria vesca HOM05D001011 ORTHO05D035356 1.5e-59 232.6 116 98.3
FvH4_5g11160 Fragaria vesca HOM05D008495 ORTHO05D035356 1.5e-59 232.6 116 98.3
FAN13G1190 Fragaria x ananassa HOM05D008495 ORTHO05D012517 5.7e-59 230.7 116 96.6
FAN18G2904 Fragaria x ananassa HOM05D008495 ORTHO05D012517 1.3e-58 229.6 116 96.6
FAN08G0175 Fragaria x ananassa HOM05D030830 ORTHO05D035356 2.2e-55 218.8 133 84.2
FAN04G0325 Fragaria x ananassa HOM05D008495 ORTHO05D012517 3.3e-51 204.9 107 95.3
FAN18G3095 Fragaria x ananassa HOM05D008495 ORTHO05D012517 7.5e-43 177.2 116 69.0
FAN13G0180 Fragaria x ananassa HOM05D000248 ORTHO05D000146 1.7e-42 176.0 116 69.0
FAN13G1491 Fragaria x ananassa HOM05D000248 ORTHO05D000146 1.7e-42 176.0 116 69.0
FAN13G1701 Fragaria x ananassa HOM05D000248 ORTHO05D000146 1.7e-42 176.0 116 69.0
FAN13G1884 Fragaria x ananassa HOM05D000248 ORTHO05D000146 1.7e-42 176.0 116 69.0
FAN13G2559 Fragaria x ananassa HOM05D000248 ORTHO05D000146 1.7e-42 176.0 116 69.0
FAN13G2794 Fragaria x ananassa HOM05D000248 ORTHO05D000146 1.7e-42 176.0 116 69.0
FAN13G3019 Fragaria x ananassa HOM05D000248 ORTHO05D000146 1.7e-42 176.0 116 69.0
FAN13G3219 Fragaria x ananassa HOM05D000248 ORTHO05D000146 1.7e-42 176.0 116 69.0
RcHm_v2.0_Chr7g0186691 Rosa chinensis HOM05D000529 ORTHO05D012517 2.8e-42 175.3 116 68.1
FAN13G2246 Fragaria x ananassa HOM05D000248 ORTHO05D000146 4.8e-42 174.5 116 68.1
FAN08G1641 Fragaria x ananassa HOM05D000083 ORTHO05D025348 3.3e-38 161.8 115 66.1
FAN13G2049 Fragaria x ananassa HOM05D000306 ORTHO05D025348 1.2e-37 159.8 115 65.2
FvH4_5g11250 Fragaria vesca HOM05D000306 ORTHO05D025348 4.7e-37 157.9 115 64.3
RcHm_v2.0_Chr2g0102741 Rosa chinensis HOM05D001084 ORTHO05D001275 6.1e-37 157.5 116 66.4
FAN18G0367 Fragaria x ananassa HOM05D000083 ORTHO05D025348 1.0e-36 156.8 115 63.5
FAN18G3041 Fragaria x ananassa HOM05D000083 ORTHO05D025348 1.0e-36 156.8 115 63.5
FvH4_5g11210 Fragaria vesca HOM05D000248 ORTHO05D000146 7.0e-33 144.1 114 61.4
FvH4_5g11100 Fragaria vesca HOM05D000248 ORTHO05D000146 2.7e-32 142.1 114 61.4
FAN18G1596 Fragaria x ananassa HOM05D000248 ORTHO05D017958 2.7e-32 142.1 114 61.4
FAN18G3118 Fragaria x ananassa HOM05D000248 ORTHO05D000146 2.7e-32 142.1 114 61.4
FAN19G2196 Fragaria x ananassa HOM05D001084 ORTHO05D001275 2.7e-32 142.1 109 64.2
FvH4_1g13670 Fragaria vesca HOM05D008495 ORTHO05D012517 4.5e-32 141.4 109 64.2
FAN08G3301 Fragaria x ananassa HOM05D000248 ORTHO05D017958 6.6e-31 137.5 114 59.6
FAN26G0747 Fragaria x ananassa HOM05D001563 ORTHO05D000761 9.5e-30 133.7 106 61.3
FAN13G2367 Fragaria x ananassa HOM05D000248 ORTHO05D000146 1.6e-29 132.9 115 57.4
RcHm_v2.0_Chr7g0186641 Rosa chinensis HOM05D000248 ORTHO05D000146 5.8e-27 124.4 117 53.8
MD06G1115200 Malus domestica HOM05D000081 ORTHO05D000036 4.6e-24 114.8 108 53.7
Prupe.5G127900 Prunus persica HOM05D000529 ORTHO05D012517 4.6e-24 114.8 108 52.8
FAN01G0007 Fragaria x ananassa HOM05D008495 ORTHO05D012517 9.5e-22 107.1 82 62.2
MD02G1022000 Malus domestica HOM05D008495 ORTHO05D025806 3.6e-21 105.1 114 46.5
FvH4_1g13660 Fragaria vesca HOM05D001084 ORTHO05D001275 2.3e-20 102.4 83 59.0
MD15G1278700 Malus domestica HOM05D000046 ORTHO05D025806 3.1e-20 102.1 114 45.6
MD02G1021700 Malus domestica HOM05D000041 ORTHO05D001532 6.8e-20 100.9 114 43.9
MD06G1115400 Malus domestica HOM05D000529 ORTHO05D025806 3.4e-19 98.6 119 47.1
RcHm_v2.0_Chr2g0104561 Rosa chinensis HOM05D000046 ORTHO05D025806 1.7e-18 96.3 114 42.1
Prupe.7G138400 Prunus persica HOM05D000046 ORTHO05D025806 4.9e-18 94.7 114 43.9
RcHm_v2.0_Chr1g0337761 Rosa chinensis HOM05D008495 ORTHO05D012517 4.6e-16 88.2 94 46.8
RcHm_v2.0_Chr7g0186631 Rosa chinensis HOM05D008495 ORTHO05D017958 8.6e-15 84.0 112 42.0
RcHm_v2.0_Chr2g0102961 Rosa chinensis HOM05D000046 ORTHO05D020739 1.9e-14 82.8 120 41.7
FAN02G0225 Fragaria x ananassa HOM05D008495 ORTHO05D010311 2.5e-14 82.4 119 40.3
FvH4_1g15500 Fragaria vesca HOM05D000529 ORTHO05D000472 9.5e-14 80.5 107 41.1
RcHm_v2.0_Chr2g0104621 Rosa chinensis HOM05D000046 ORTHO05D020635 6.2e-13 77.8 107 38.3
FAN26G1753 Fragaria x ananassa HOM05D000046 ORTHO05D020739 1.4e-12 76.6 107 39.3
FvH4_5g03550 Fragaria vesca HOM05D008495 ORTHO05D022638 5.2e-12 74.7 115 40.0
FAN04G0406 Fragaria x ananassa HOM05D008495 ORTHO05D022638 5.2e-12 74.7 117 39.3
FAN18G0704 Fragaria x ananassa HOM05D008495 ORTHO05D022638 5.2e-12 74.7 115 40.0
FAN08G1127 Fragaria x ananassa HOM05D008495 ORTHO05D022578 8.9e-12 73.9 115 40.9
FAN13G3081 Fragaria x ananassa HOM05D008495 ORTHO05D022638 8.9e-12 73.9 115 40.9
FAN26G3207 Fragaria x ananassa HOM05D000529 ORTHO05D000472 1.2e-11 73.6 107 37.4
RcHm_v2.0_Chr2g0143661 Rosa chinensis HOM05D003771 ORTHO05D010311 1.5e-11 73.2 114 37.7
FvH4_5g11120 Fragaria vesca HOM05D000248 ORTHO05D017958 3.4e-11 72.0 109 38.5
FvH4_5g11230 Fragaria vesca HOM05D000248 ORTHO05D017958 3.4e-11 72.0 109 38.5
FAN13G2602 Fragaria x ananassa HOM05D000248 ORTHO05D017958 3.4e-11 72.0 109 38.5
FvH4_5g03510 Fragaria vesca HOM05D008495 ORTHO05D029605 4.4e-11 71.6 108 42.6
FvH4_5g11200 Fragaria vesca HOM05D000248 ORTHO05D017958 4.4e-11 71.6 109 38.5
FAN18G4342 Fragaria x ananassa HOM05D008495 ORTHO05D029605 4.4e-11 71.6 108 42.6
FAN23G0627 Fragaria x ananassa HOM05D000046 ORTHO05D020739 4.4e-11 71.6 107 37.4
FAN26G0958 Fragaria x ananassa HOM05D000529 ORTHO05D000472 5.8e-11 71.2 117 35.9
FAN08G3275 Fragaria x ananassa HOM05D000248 ORTHO05D012517 7.5e-11 70.9 44 61.4
FAN13G1363 Fragaria x ananassa HOM05D008495 ORTHO05D029605 7.5e-11 70.9 108 42.6
FAN13G2265 Fragaria x ananassa HOM05D008495 ORTHO05D029605 7.5e-11 70.9 108 42.6
FAN23G2692 Fragaria x ananassa HOM05D000529 ORTHO05D000472 7.5e-11 70.9 114 33.3
FAN04G2910 Fragaria x ananassa HOM05D008495 ORTHO05D022578 1.3e-10 70.1 108 40.7
FAN13G1716 Fragaria x ananassa HOM05D000248 ORTHO05D012517 2.2e-10 69.3 44 61.4
FAN13G1987 Fragaria x ananassa HOM05D000248 ORTHO05D012517 2.2e-10 69.3 44 61.4
FAN28G0855 Fragaria x ananassa HOM05D000529 ORTHO05D000472 2.2e-10 69.3 114 33.3
FvH4_1g15270 Fragaria vesca HOM05D000046 ORTHO05D010311 3.7e-10 68.6 120 33.3
FAN19G1335 Fragaria x ananassa HOM05D008495 ORTHO05D022578 3.7e-10 68.6 107 39.3
FAN18G4033 Fragaria x ananassa HOM05D000248 ORTHO05D017958 4.9e-10 68.2 109 36.7
FvH4_7g14830 Fragaria vesca HOM05D000166 ORTHO05D001532 6.4e-10 67.8 44 72.7
FAN13G2003 Fragaria x ananassa HOM05D000248 ORTHO05D000146 6.4e-10 67.8 44 61.4
FAN28G2465 Fragaria x ananassa HOM05D001563 ORTHO05D001956 6.4e-10 67.8 58 60.3
FAN08G2107 Fragaria x ananassa HOM05D008495 ORTHO05D022578 1.1e-09 67.0 108 39.8
FAN04G1506 Fragaria x ananassa HOM05D008495 ORTHO05D022578 1.4e-09 66.6 108 40.7
FAN06G0595 Fragaria x ananassa HOM05D000166 ORTHO05D001532 1.4e-09 66.6 44 72.7
Prupe.5G127800 Prunus persica HOM05D008495 ORTHO05D010311 1.4e-09 66.6 90 44.4
RcHm_v2.0_Chr2g0104741 Rosa chinensis HOM05D000529 ORTHO05D000472 1.4e-09 66.6 120 35.0
RcHm_v2.0_Chr2g0104831 Rosa chinensis HOM05D000083 ORTHO05D002708 1.4e-09 66.6 107 34.6
RcHm_v2.0_Chr1g0373981 Rosa chinensis HOM05D000614 ORTHO05D000463 1.9e-09 66.2 41 65.9
FvH4_1g15330 Fragaria vesca HOM05D000529 ORTHO05D000472 2.4e-09 65.9 116 35.3
FAN19G2597 Fragaria x ananassa HOM05D000529 ORTHO05D000472 2.4e-09 65.9 114 32.5
RcHm_v2.0_Chr2g0104761 Rosa chinensis HOM05D000529 ORTHO05D000472 2.4e-09 65.9 87 41.4
Prupe.7G139600 Prunus persica HOM05D000529 ORTHO05D000472 3.2e-09 65.5 107 38.3
FvH4_1g15220 Fragaria vesca HOM05D000529 ORTHO05D000472 4.1e-09 65.1 114 31.6
FAN23G2720 Fragaria x ananassa HOM05D000046 ORTHO05D020635 5.4e-09 64.7 97 36.1
QL06p042852 Quercus lobata HOM05D000529 ORTHO05D000472 5.4e-09 64.7 104 35.6
FvH4_1g15300 Fragaria vesca HOM05D008495 ORTHO05D022578 7.1e-09 64.3 107 36.4
FAN19G2244 Fragaria x ananassa HOM05D000046 ORTHO05D020635 7.1e-09 64.3 96 35.4
FvH4_1g15430 Fragaria vesca HOM05D000046 ORTHO05D020635 1.2e-08 63.5 96 35.4
FAN23G1609 Fragaria x ananassa HOM05D008495 ORTHO05D020739 1.2e-08 63.5 97 41.2
FAN23G1659 Fragaria x ananassa HOM05D000891 ORTHO05D000761 1.6e-08 63.2 108 33.3
FAN26G2562 Fragaria x ananassa HOM05D000046 ORTHO05D207025 2.1e-08 62.8 120 32.5
FAN26G2300 Fragaria x ananassa HOM05D000046 ORTHO05D020635 2.7e-08 62.4 96 35.4
FvH4_5g11180 Fragaria vesca HOM05D000248 ORTHO05D010311 3.5e-08 62.0 44 61.4
FAN19G1579 Fragaria x ananassa HOM05D008495 ORTHO05D020679 3.5e-08 62.0 108 35.2
Haze_15448 Corylus avellana HOM05D000529 ORTHO05D000472 6.0e-08 61.2 104 34.6
RcHm_v2.0_Chr2g0104151 Rosa chinensis HOM05D000529 ORTHO05D000472 7.8e-08 60.8 82 34.1
FvH4_1g15120 Fragaria vesca HOM05D000529 ORTHO05D000472 1.0e-07 60.5 107 30.8
FAN06G0627 Fragaria x ananassa HOM05D000166 ORTHO05D001532 1.7e-07 59.7 41 68.3
FvH4_1g15040 Fragaria vesca HOM05D008495 ORTHO05D020679 2.3e-07 59.3 108 33.3
CiPaw.01G025100 Carya illinoinensis HOM05D000529 ORTHO05D000472 3.0e-07 58.9 115 32.2
FAN28G1072 Fragaria x ananassa HOM05D008495 ORTHO05D020679 3.0e-07 58.9 108 33.3
RcHm_v2.0_Chr2g0104731 Rosa chinensis HOM05D000577 ORTHO05D003509 3.0e-07 58.9 119 34.5
CiPaw.01G024500 Carya illinoinensis HOM05D000529 ORTHO05D000472 6.6e-07 57.8 107 33.6
CiPaw.01G025200 Carya illinoinensis HOM05D000529 ORTHO05D000472 6.6e-07 57.8 115 32.2
Prupe.7G139100 Prunus persica HOM05D000529 ORTHO05D000472 6.6e-07 57.8 108 36.1
MD02G1165900 Malus domestica HOM05D000529 ORTHO05D010311 8.6e-07 57.4 107 30.8
CiPaw.01G024600 Carya illinoinensis HOM05D000529 ORTHO05D000472 1.1e-06 57.0 115 31.3
FvH4_5g03530 Fragaria vesca HOM05D008495 ORTHO05D020679 1.5e-06 56.6 87 36.8
FAN18G0985 Fragaria x ananassa HOM05D008495 ORTHO05D022638 1.5e-06 56.6 87 36.8
RcHm_v2.0_Chr2g0104631 Rosa chinensis HOM05D008495 ORTHO05D020635 1.9e-06 56.2 86 37.2
RcHm_v2.0_Chr7g0230551 Rosa chinensis HOM05D000529 ORTHO05D010311 1.9e-06 56.2 101 31.7
FAN08G1780 Fragaria x ananassa HOM05D000529 ORTHO05D010311 2.5e-06 55.8 105 31.4
Prupe.7G139800 Prunus persica HOM05D000529 ORTHO05D000472 2.5e-06 55.8 113 33.6
RcHm_v2.0_Chr2g0104191 Rosa chinensis HOM05D000529 ORTHO05D000472 2.5e-06 55.8 83 36.1
CiPaw.01G103200 Carya illinoinensis HOM05D000529 ORTHO05D000472 3.3e-06 55.5 115 32.2
RcHm_v2.0_Chr2g0104571 Rosa chinensis HOM05D000046 ORTHO05D000195 3.3e-06 55.5 81 38.3
RcHm_v2.0_Chr2g0104121 Rosa chinensis HOM05D000529 ORTHO05D000472 4.3e-06 55.1 107 28.0
FAN08G3343 Fragaria x ananassa HOM05D000529 ORTHO05D010311 5.6e-06 54.7 87 33.3
Prupe.7G140400 Prunus persica HOM05D000529 ORTHO05D020679 7.3e-06 54.3 115 31.3
RcHm_v2.0_Chr2g0104171 Rosa chinensis HOM05D000529 ORTHO05D000472 7.3e-06 54.3 107 29.9


User provided reference genes

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