Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G3125 Fragaria x ananassa HOM05D007369 ORTHO05D009369 9.2e-66 253.4 131 100.0
FAN17G0929 Fragaria x ananassa HOM05D007369 ORTHO05D009369 1.1e-63 246.5 126 100.0
FAN07G2486 Fragaria x ananassa HOM05D007369 ORTHO05D009369 1.1e-61 240.0 125 97.6
FvH4_4g17160 Fragaria vesca HOM05D007369 ORTHO05D009369 8.9e-61 236.9 126 96.0
FAN12G1425 Fragaria x ananassa HOM05D007369 ORTHO05D009369 8.9e-61 236.9 126 96.0
FAN12G3176 Fragaria x ananassa HOM05D007369 ORTHO05D009369 1.3e-59 233.0 126 95.2
RcHm_v2.0_Chr4g0420931 Rosa chinensis HOM05D007369 ORTHO05D009369 1.5e-52 209.5 129 83.7
Manes.03G190800 Manihot esculenta HOM05D007369 ORTHO05D009369 1.9e-42 176.0 128 69.5
Prupe.1G142600 Prunus persica HOM05D007369 ORTHO05D009369 5.4e-42 174.5 129 69.8
FAN22G0049 Fragaria x ananassa HOM05D007369 ORTHO05D009369 1.6e-41 172.9 110 80.9
Dinv38329 Davidia involucrata HOM05D007369 ORTHO05D009369 7.8e-41 170.6 131 67.2
Cfa015498 Carpinus fangiana HOM05D007369 ORTHO05D009369 6.6e-40 167.5 129 65.9
Gohir.D09G060700 Gossypium hirsutum HOM05D007369 ORTHO05D009369 1.5e-39 166.4 129 68.2
MD13G1174200 Malus domestica HOM05D007369 ORTHO05D009369 1.5e-39 166.4 129 67.4
Gohir.A09G061800 Gossypium hirsutum HOM05D007369 ORTHO05D009369 3.3e-39 165.2 129 67.4
Hma1.2p1_0078F.1_g040800 Hydrangea macrophylla HOM05D007369 ORTHO05D009369 1.3e-38 163.3 131 64.1
QL06p007318 Quercus lobata HOM05D007369 ORTHO05D009369 6.2e-38 161.0 130 66.2
CSS0015973 Camellia sinensis var. sinensis HOM05D007369 ORTHO05D009369 8.1e-38 160.6 132 64.4
Gorai.006G075300 Gossypium raimondii HOM05D007369 ORTHO05D009369 1.1e-37 160.2 126 68.3
Manes.15G017400 Manihot esculenta HOM05D007369 ORTHO05D009369 1.4e-37 159.8 128 61.7
Duzib052G0382 Durio zibethinus HOM05D007369 ORTHO05D009369 2.4e-37 159.1 129 65.9
Potri.010G031250 Populus trichocarpa HOM05D007369 ORTHO05D009369 2.4e-37 159.1 127 66.1
Potri.008G195300 Populus trichocarpa HOM05D007369 ORTHO05D009369 3.1e-37 158.7 129 64.3
GSVIVG01017812001 Vitis vinifera HOM05D007369 ORTHO05D009369 3.1e-37 158.7 129 65.1
CiPaw.02G086900 Carya illinoinensis HOM05D007369 ORTHO05D009369 5.3e-37 157.9 129 62.0
Thecc.04G277200 Theobroma cacao HOM05D007369 ORTHO05D009369 6.9e-37 157.5 129 65.1
Sabra08G0148500 Salix brachista HOM05D007369 ORTHO05D009369 1.2e-36 156.8 127 65.4
Oeu044796.2 Olea europaea HOM05D007369 ORTHO05D009369 6.4e-35 151.0 129 62.0
Rhsim04G0215900 Rhododendron simsii HOM05D007369 ORTHO05D009369 8.4e-35 150.6 129 60.5
Migut.G00214 Erythranthe guttata HOM05D007369 ORTHO05D009369 1.4e-34 149.8 124 61.3
TAR636G2558 Trochodendron aralioides HOM05D007369 ORTHO05D009369 1.9e-34 149.4 128 60.2
Oeu062882.1 Olea europaea HOM05D007369 ORTHO05D009369 7.1e-34 147.5 129 61.2
Ciclev10005057m.g Citrus clementina HOM05D007369 ORTHO05D009369 9.3e-34 147.1 129 61.2
CAN.G223.8 Capsicum annuum HOM05D007369 ORTHO05D009369 2.7e-33 145.6 129 58.1
Nn3g21294 Nelumbo nucifera HOM05D007369 ORTHO05D009369 3.5e-33 145.2 124 60.5
Sed0026345 Sechium edule HOM05D007369 ORTHO05D009369 3.5e-33 145.2 132 59.8
Aqoxy2G03087 Aquilegia oxysepala HOM05D007369 ORTHO05D009369 7.9e-33 144.1 123 61.8
Solyc01g067700.3 Solanum lycopersicum HOM05D007369 ORTHO05D009369 7.9e-33 144.1 128 57.8
Phvul.006G161000 Phaseolus vulgaris HOM05D007369 ORTHO05D009369 1.3e-32 143.3 126 60.3
COL.COLO4_13933 Corchorus olitorius HOM05D007369 ORTHO05D009369 1.7e-32 142.9 163 50.9
Sopen01g029630 Solanum pennellii HOM05D007369 ORTHO05D009369 5.1e-32 141.4 129 56.6
VMungo0540G1702 Vigna mungo HOM05D007369 ORTHO05D009369 5.1e-32 141.4 129 56.6
Nitab4.5_0003067g0040 Nicotiana tabacum HOM05D007369 ORTHO05D009369 6.6e-32 141.0 127 56.7
Nn4g26033 Nelumbo nucifera HOM05D007369 ORTHO05D009369 1.5e-31 139.8 127 56.7
SalBow2G2600 Salvia bowleyana HOM05D007369 ORTHO05D009369 3.3e-31 138.7 123 57.7
Eucgr.B01264 Eucalyptus grandis HOM05D007369 ORTHO05D009369 5.6e-31 137.9 123 58.5
Glyma.15G098300 Glycine max HOM05D007369 ORTHO05D009369 7.4e-31 137.5 129 56.6
CANSAT78G0356 Cannabis sativa HOM05D007369 ORTHO05D009369 1.3e-30 136.7 130 56.9
CsaV3_3G014100 Cucumis sativus L. HOM05D007369 ORTHO05D009369 1.3e-30 136.7 135 57.0
MD16G1175700 Malus domestica HOM05D007369 ORTHO05D009369 1.3e-30 136.7 93 75.3
Glyma.13G214800 Glycine max HOM05D007369 ORTHO05D009369 1.6e-30 136.3 129 57.4
MBI19_g37517_MAGBIO Magnolia biondii HOM05D007369 ORTHO05D009369 1.6e-30 136.3 128 55.5
TWI73G1273 Tripterygium wilfordii HOM05D007369 ORTHO05D009369 1.8e-29 132.9 128 54.7
Ca_00577_v3 Cicer arietinum L. HOM05D007369 ORTHO05D009369 5.3e-29 131.3 116 57.8
Cc03_g02400 Coffea canephora HOM05D007369 ORTHO05D009369 5.3e-29 131.3 127 56.7
THA.LOC104820236 Tarenaya hassleriana HOM05D007369 ORTHO05D009369 2.0e-28 129.4 127 51.2
ATR0706G035 Amborella trichopoda HOM05D007369 ORTHO05D009369 4.5e-28 128.3 119 53.8
TPR.G37368 Trifolium pratense HOM05D007369 ORTHO05D009369 5.8e-28 127.9 115 60.0
Medtr8g093650 Medicago truncatula HOM05D007369 ORTHO05D009369 9.9e-28 127.1 124 53.2
ClCG05G005770 Citrullus lanatus HOM05D007369 ORTHO05D009369 8.4e-27 124.0 128 54.7
Psat1g187040 Pisum sativum HOM05D007369 ORTHO05D009369 8.4e-27 124.0 130 54.6
Actinidia23432 Actinidia chinensis HOM05D007369 ORTHO05D009369 1.4e-26 123.2 106 61.3
vmacro08206 Vaccinium macrocarpon HOM05D007369 ORTHO05D009369 1.4e-26 123.2 141 51.1
Duzib151G0340 Durio zibethinus HOM05D007369 ORTHO05D009369 2.4e-26 122.5 91 70.3
Actinidia40222 Actinidia chinensis HOM05D007369 ORTHO05D009369 1.6e-25 119.8 103 60.2
SGA_v2.0_scaffold57G20253 Striga asiatica HOM05D007369 ORTHO05D009369 2.7e-25 119.0 127 50.4
Haze_01056 Corylus avellana HOM05D007369 ORTHO05D009369 4.6e-25 118.2 183 43.7
DCAR_002440 Daucus carota HOM05D007369 ORTHO05D009369 6.0e-25 117.9 123 52.0
arahy.Tifrunner.gnm1.ann1.IR05CW Arachis hypogaea HOM05D007369 ORTHO05D009369 1.0e-24 117.1 94 61.7
HanXRQChr03g0080111 Helianthus annuus HOM05D007369 ORTHO05D009369 1.0e-24 117.1 124 54.0
Mapoly0126s0031 Marchantia polymorpha HOM05D007369 ORTHO05D009369 1.0e-24 117.1 122 51.6
Peaxi162Scf00386g00219 Petunia axillaris HOM05D007369 ORTHO05D009369 8.7e-24 114.0 107 57.0
arahy.Tifrunner.gnm1.ann1.ED76E0 Arachis hypogaea HOM05D007369 ORTHO05D009369 1.5e-23 113.2 90 61.1
Lalb_Chr18g0055751 Lupinus albus HOM05D007369 ORTHO05D009369 4.3e-23 111.7 129 49.6
Nitab4.5_0000197g0120 Nicotiana tabacum HOM05D007369 ORTHO05D009369 2.4e-21 105.9 131 44.3
Ca_17638_v3 Cicer arietinum L. HOM05D007369 ORTHO05D009369 6.9e-21 104.4 127 48.0
Atru.chr4.2749 Acer truncatum HOM05D007369 ORTHO05D009369 4.5e-20 101.7 77 66.2
ECA240G2128 Erigeron canadensis HOM05D007369 ORTHO05D009369 3.8e-19 98.6 123 47.2
MELO3C031713.2 Cucumis melo HOM05D007369 ORTHO05D009369 6.5e-19 97.8 152 42.8
AagrBONN_evm.TU.Sc2ySwM_362.2687 Anthoceros agrestis HOM05D007369 ORTHO05D009369 3.0e-16 89.0 118 44.1
Sc13g0003630 Simmondsia chinensis HOM05D007369 ORTHO05D009369 1.5e-15 86.7 70 61.4
Zm00001eb410560 Zea mays HOM05D007369 ORTHO05D009369 1.6e-14 83.2 124 41.1
Dinv44429 Davidia involucrata HOM05D007369 ORTHO05D009369 1.8e-13 79.7 60 65.0
Lsat_1_v5_gn_5_50560 Lactuca sativa HOM05D007369 ORTHO05D009369 3.2e-10 68.9 72 55.6
LjContig00389g0017607 Lotus japonicus HOM05D007369 ORTHO05D009369 1.1e-07 60.5 55 50.9
Mapoly0008s0171 Marchantia polymorpha HOM05D007369 ORTHO05D009369 5.7e-07 58.2 86 39.5
Lalb_Chr20g0118171 Lupinus albus HOM05D007369 ORTHO05D009369 2.2e-06 56.2 56 53.6
Hund24911 Selenicereus undatus HOM05D007369 ORTHO05D009369 6.3e-06 54.7 128 32.8


User provided reference genes

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