Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G3063 Fragaria x ananassa HOM05D006333 ORTHO05D007799 3.3e-141 505.0 249 100.0
FvH4_4g36970 Fragaria vesca HOM05D006333 ORTHO05D007799 3.6e-119 431.8 249 89.2
FAN07G1904 Fragaria x ananassa HOM05D006333 ORTHO05D007799 8.0e-119 430.6 249 89.2
RcHm_v2.0_Chr4g0446761 Rosa chinensis HOM05D006333 ORTHO05D007799 1.6e-111 406.4 248 84.7
FAN12G1853 Fragaria x ananassa HOM05D006333 ORTHO05D007799 5.7e-109 397.9 250 84.0
Prupe.1G347700 Prunus persica HOM05D006333 ORTHO05D007799 4.9e-100 368.2 250 76.0
Ciclev10032700m.g Citrus clementina HOM05D006333 ORTHO05D007799 4.6e-98 361.7 246 75.6
Prupe.1G347900 Prunus persica HOM05D006333 ORTHO05D007799 1.5e-96 356.7 247 74.1
Duzib132G1109 Durio zibethinus HOM05D006333 ORTHO05D007799 7.3e-96 354.4 244 75.0
COL.COLO4_08588 Corchorus olitorius HOM05D006333 ORTHO05D007799 1.1e-94 350.5 245 74.3
Thecc.02G159600 Theobroma cacao HOM05D006333 ORTHO05D007799 6.8e-94 347.8 245 73.5
AT1G17330 Arabidopsis thaliana HOM05D006333 ORTHO05D007799 2.0e-93 346.3 245 72.7
MD13G1004800 Malus domestica HOM05D006333 ORTHO05D007799 2.0e-93 346.3 243 74.5
Gohir.D13G061500 Gossypium hirsutum HOM05D006333 ORTHO05D007799 2.6e-93 345.9 249 72.3
CiPaw.05G169800 Carya illinoinensis HOM05D006333 ORTHO05D007799 1.3e-92 343.6 246 72.0
Thhalv10008690m.g Eutrema salsugineum HOM05D006333 ORTHO05D007799 1.3e-92 343.6 245 71.8
AL1G29580 Arabidopsis lyrata HOM05D006333 ORTHO05D007799 2.2e-92 342.8 245 72.2
Gohir.A13G060400 Gossypium hirsutum HOM05D006333 ORTHO05D007799 2.2e-92 342.8 245 72.7
Gorai.013G070000 Gossypium raimondii HOM05D006333 ORTHO05D007799 2.2e-92 342.8 255 71.0
TWI53G1586 Tripterygium wilfordii HOM05D006333 ORTHO05D007799 2.9e-92 342.4 249 69.9
Aa31LG7G2140 Aethionema arabicum HOM05D006333 ORTHO05D007799 6.4e-92 341.3 242 73.1
Manes.04G057700 Manihot esculenta HOM05D006333 ORTHO05D007799 8.3e-92 340.9 245 71.0
CANSAT56G2519 Cannabis sativa HOM05D006333 ORTHO05D007799 2.4e-91 339.3 249 70.7
THA.LOC104808350 Tarenaya hassleriana HOM05D006333 ORTHO05D007799 3.2e-91 339.0 244 72.1
CARHR017920 Cardamine hirsuta HOM05D006333 ORTHO05D007799 1.2e-90 337.0 244 72.1
MELO3C024016.2 Cucumis melo HOM05D006333 ORTHO05D007799 1.0e-89 334.0 245 71.0
Sp1g15450 Schrenkiella parvula HOM05D006333 ORTHO05D007799 3.0e-89 332.4 242 71.5
Atru.chr11.1164 Acer truncatum HOM05D006333 ORTHO05D007799 3.3e-88 328.9 245 69.4
Medtr4g023480 Medicago truncatula HOM05D006333 ORTHO05D007799 5.6e-88 328.2 249 67.9
BcaC05g25649 Brassica carinata HOM05D006333 ORTHO05D007799 1.2e-87 327.0 242 69.8
BolC5t30276H Brassica oleracea HOM05D006333 ORTHO05D007799 1.2e-87 327.0 242 69.8
Dinv17616 Davidia involucrata HOM05D006333 ORTHO05D007799 1.6e-87 326.6 264 66.3
Lj3g0001632 Lotus japonicus HOM05D006333 ORTHO05D007799 1.6e-87 326.6 246 67.5
Sed0022709 Sechium edule HOM05D006333 ORTHO05D007799 2.1e-87 326.2 245 69.4
C05p15710 Brassica napus HOM05D006333 ORTHO05D007799 3.6e-87 325.5 242 69.4
GSVIVG01012055001 Vitis vinifera HOM05D006333 ORTHO05D007799 3.6e-87 325.5 232 72.4
Lj3A849G43 Lonicera japonica HOM05D006333 ORTHO05D007799 4.7e-87 325.1 245 67.8
Phvul.011G028900 Phaseolus vulgaris HOM05D006333 ORTHO05D007799 6.2e-87 324.7 243 68.7
Potri.007G072000 Populus trichocarpa HOM05D006333 ORTHO05D007799 6.2e-87 324.7 244 70.1
Glyma.12G026000 Glycine max HOM05D006333 ORTHO05D007799 8.1e-87 324.3 249 67.1
CSS0049289 Camellia sinensis var. sinensis HOM05D006333 ORTHO05D007799 1.1e-86 323.9 249 68.3
CsaV3_3G031750 Cucumis sativus L. HOM05D006333 ORTHO05D007799 1.1e-86 323.9 245 69.8
Psat7g233400 Pisum sativum HOM05D006333 ORTHO05D007799 1.8e-86 323.2 246 67.5
Carub.0001s1708 Capsella rubella HOM05D006333 ORTHO05D007799 2.3e-86 322.8 243 69.1
Nitab4.5_0008825g0020 Nicotiana tabacum HOM05D006333 ORTHO05D007799 3.1e-86 322.4 246 68.7
A06p13260 Brassica napus HOM05D006333 ORTHO05D007799 4.0e-86 322.0 242 69.0
BraA06t24479Z Brassica rapa HOM05D006333 ORTHO05D007799 8.9e-86 320.9 242 69.0
Eucgr.J00869 Eucalyptus grandis HOM05D006333 ORTHO05D007799 1.2e-85 320.5 245 67.8
Sopen02g004090 Solanum pennellii HOM05D006333 ORTHO05D007799 1.2e-85 320.5 245 68.2
Hund24376 Selenicereus undatus HOM05D006333 ORTHO05D007799 2.0e-85 319.7 245 68.6
PSO782G2700 Papaver somniferum HOM05D006333 ORTHO05D007799 3.4e-85 318.9 246 67.1
Solyc02g014720.4 Solanum lycopersicum HOM05D006333 ORTHO05D007799 3.4e-85 318.9 245 67.8
VMungo1127G0165 Vigna mungo HOM05D006333 ORTHO05D007799 9.9e-85 317.4 243 67.1
HanXRQChr12g0366301 Helianthus annuus HOM05D006333 ORTHO05D007799 1.7e-84 316.6 245 67.3
Hma1.2p1_0044F.1_g026090 Hydrangea macrophylla HOM05D006333 ORTHO05D007799 1.7e-84 316.6 248 65.7
Nitab4.5_0003092g0070 Nicotiana tabacum HOM05D006333 ORTHO05D007799 2.2e-84 316.2 237 70.0
Cfa008751 Carpinus fangiana HOM05D006333 ORTHO05D007799 2.9e-84 315.8 246 67.1
CAN.G1011.5 Capsicum annuum HOM05D006333 ORTHO05D007799 6.4e-84 314.7 245 66.9
PGR044G2499 Punica granatum HOM05D006333 ORTHO05D007799 8.3e-84 314.3 243 67.5
Ca_19901_v3 Cicer arietinum L. HOM05D006333 ORTHO05D007799 1.4e-83 313.5 243 66.7
ECA233G4371 Erigeron canadensis HOM05D006333 ORTHO05D007799 1.9e-83 313.2 249 65.5
Rhsim09G0071800 Rhododendron simsii HOM05D006333 ORTHO05D007799 2.4e-83 312.8 244 67.2
BcaB07g34033 Brassica carinata HOM05D006333 ORTHO05D007799 4.1e-83 312.0 246 67.5
Aqoxy3G04253 Aquilegia oxysepala HOM05D006333 ORTHO05D007799 3.5e-82 308.9 243 65.8
Sc17g0000100 Simmondsia chinensis HOM05D006333 ORTHO05D007799 5.1e-81 305.1 245 65.3
EL10Ac9g22952 Beta vulgaris HOM05D006333 ORTHO05D007799 1.1e-80 303.9 245 65.7
MSTRG.11948 Avicennia marina HOM05D006333 ORTHO05D007799 2.5e-80 302.8 241 64.7
Lsat_1_v5_gn_8_33120 Lactuca sativa HOM05D006333 ORTHO05D007799 2.5e-80 302.8 248 65.3
Atru.chr11.2675 Acer truncatum HOM05D006333 ORTHO05D007799 3.3e-80 302.4 240 66.2
Nn5g28807 Nelumbo nucifera HOM05D006333 ORTHO05D007799 7.3e-80 301.2 243 63.4
Atru.chr11.2676 Acer truncatum HOM05D006333 ORTHO05D007799 2.1e-79 299.7 240 65.8
MBI06_g42293_MAGBIO Magnolia biondii HOM05D006333 ORTHO05D007799 2.8e-79 299.3 248 64.1
ATR0618G379 Amborella trichopoda HOM05D006333 ORTHO05D007799 2.6e-77 292.7 246 61.8
Migut.A00709 Erythranthe guttata HOM05D006333 ORTHO05D007799 2.6e-77 292.7 249 62.2
Sabra07G0060700 Salix brachista HOM05D006333 ORTHO05D007799 3.8e-76 288.9 281 58.4
TPR.G9857 Trifolium pratense HOM05D006333 ORTHO05D007799 6.4e-76 288.1 218 67.0
unitig_32.g11605 Utricularia gibba HOM05D006333 ORTHO05D007799 6.4e-76 288.1 245 61.2
CSS0015547 Camellia sinensis var. sinensis HOM05D006333 ORTHO05D007799 1.9e-75 286.6 245 63.7
Peaxi162Scf00334g00421 Petunia axillaris HOM05D006333 ORTHO05D007799 4.1e-75 285.4 225 67.1
ClCG10G012010 Citrullus lanatus HOM05D006333 ORTHO05D007799 1.7e-73 280.0 228 66.2
Cc11_g02420 Coffea canephora HOM05D006333 ORTHO05D007799 5.1e-73 278.5 245 61.6
Eucgr.J00870 Eucalyptus grandis HOM05D006333 ORTHO05D007799 1.1e-72 277.3 234 63.7
Lalb_Chr01g0001411 Lupinus albus HOM05D006333 ORTHO05D007799 2.5e-72 276.2 246 59.3
DCAR_008496 Daucus carota HOM05D003141 ORTHO05D003633 3.3e-72 275.8 220 67.3
PSO063G3232 Papaver somniferum HOM05D006333 ORTHO05D007799 3.3e-72 275.8 271 57.2
arahy.Tifrunner.gnm1.ann1.A0JP3J Arachis hypogaea HOM05D006333 ORTHO05D007799 1.8e-70 270.0 249 61.4
arahy.Tifrunner.gnm1.ann1.N7V6FU Arachis hypogaea HOM05D006333 ORTHO05D007799 2.0e-69 266.5 270 57.4
AUR62017701 Chenopodium quinoa HOM05D006333 ORTHO05D007799 3.4e-69 265.8 242 60.7
SGA_v2.0_scaffold146G36264 Striga asiatica HOM05D006333 ORTHO05D007799 1.7e-68 263.5 285 53.3
Os10g0486000 Oryza sativa ssp. japonica HOM05D006333 ORTHO05D007799 6.4e-68 261.5 245 57.1
HPP92_008575 Vanilla planifolia HOM05D006333 ORTHO05D007799 1.9e-67 260.0 246 58.1
AUR62032988 Chenopodium quinoa HOM05D006333 ORTHO05D007799 1.9e-64 250.0 232 60.3
Actinidia11766 Actinidia chinensis HOM05D006333 ORTHO05D007799 4.3e-64 248.8 248 56.9
Ah.01g001500 Amaranthus hybridus HOM05D006333 ORTHO05D007799 6.2e-63 245.0 203 63.1
SalBow7G0482 Salvia bowleyana HOM05D006333 ORTHO05D007799 3.0e-57 226.1 290 48.6
Cpa.g.sc0.135 Carica papaya HOM05D006333 ORTHO05D007799 1.1e-56 224.2 178 64.0
SGA_v2.0_scaffold173G39125 Striga asiatica HOM05D006333 ORTHO05D007799 1.1e-54 217.6 184 62.0
CDE02G3779 Ceratophyllum demersum HOM05D006333 ORTHO05D007799 2.4e-54 216.5 233 54.9
Pp3c7_23360 Physcomitrium patens HOM05D006333 ORTHO05D007799 9.0e-54 214.5 242 48.8
SMO116G0442 Selaginella moellendorffii HOM05D006333 ORTHO05D007799 1.2e-53 214.2 239 50.6
TAR629G0175 Trochodendron aralioides HOM05D006333 ORTHO05D007799 3.4e-53 212.6 177 62.7
Haze_11767 Corylus avellana HOM05D006333 ORTHO05D007799 2.9e-52 209.5 230 54.3
Cre05.g234647 Chlamydomonas reinhardtii HOM05D006333 ORTHO05D007799 4.3e-48 195.7 252 45.6
MCO07G572 Micromonas commoda HOM05D006333 ORTHO05D007799 1.3e-44 184.1 246 45.5
Zm00001eb045350 Zea mays HOM05D006333 ORTHO05D007799 3.8e-44 182.6 167 56.3
vmacro16037 Vaccinium macrocarpon HOM05D006333 ORTHO05D007799 3.5e-42 176.0 189 55.0
Actinidia13050 Actinidia chinensis HOM05D006333 ORTHO05D007799 2.3e-41 173.3 226 48.7
PRCOL_00000482 Prasinoderma coloniale HOM05D006333 ORTHO05D007799 5.9e-37 158.7 245 41.6
QL03p044200 Quercus lobata HOM05D006333 ORTHO05D007799 3.6e-34 149.4 85 83.5
Mapoly0006s0058 Marchantia polymorpha HOM05D006333 ORTHO05D007799 7.9e-34 148.3 174 47.7
SalBow1G5083 Salvia bowleyana HOM05D006333 ORTHO05D007799 5.3e-30 135.6 146 53.4
CBR_g5629 Chara braunii HOM05D006333 ORTHO05D007799 1.1e-27 127.9 409 29.8
Aa31sc968G10 Aethionema arabicum HOM05D006333 ORTHO05D007799 5.7e-24 115.5 139 49.6
Ah.05g173900 Amaranthus hybridus HOM05D006333 ORTHO05D007799 3.4e-21 106.3 108 50.9
QL03p044193 Quercus lobata HOM05D006333 ORTHO05D007799 3.8e-20 102.8 67 76.1
Thecc.08G107200 Theobroma cacao HOM05D006333 ORTHO05D007799 5.0e-20 102.4 94 58.5
Cpa.g.sc0.136 Carica papaya HOM05D006333 ORTHO05D007799 7.2e-19 98.6 63 81.0
Haze_18642 Corylus avellana HOM05D006333 ORTHO05D007799 2.3e-17 93.6 71 67.6
SalBow1G0042 Salvia bowleyana HOM05D006333 ORTHO05D007799 3.1e-14 83.2 68 66.2
Haze_06289 Corylus avellana HOM05D006333 ORTHO05D007799 7.0e-14 82.0 75 60.0
Oeu044913.1 Olea europaea HOM05D006333 ORTHO05D007799 2.0e-13 80.5 63 69.8
Cfa024705 Carpinus fangiana HOM05D006333 ORTHO05D007799 2.5e-11 73.6 214 29.0
TAR629G1621 Trochodendron aralioides HOM05D006333 ORTHO05D007799 2.5e-11 73.6 57 68.4
Aa31LG4G11880 Aethionema arabicum HOM05D006333 ORTHO05D007799 2.3e-09 67.0 50 64.0
MBI06_g42292_MAGBIO Magnolia biondii HOM05D006333 ORTHO05D007799 6.7e-09 65.5 55 58.2
Aa31sc286G50 Aethionema arabicum HOM05D006333 ORTHO05D007799 1.2e-08 64.7 39 79.5


User provided reference genes

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