Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G3046 Fragaria x ananassa HOM05D007346 ORTHO05D009044 5.3e-138 494.6 291 100.0
FvH4_4g02080 Fragaria vesca HOM05D007346 ORTHO05D009044 2.7e-102 375.9 387 59.4
FvH4_4g02090 Fragaria vesca HOM05D007346 ORTHO05D009044 4.2e-95 352.1 343 61.5
FAN12G0105 Fragaria x ananassa HOM05D007346 ORTHO05D009044 5.9e-89 331.6 242 71.9
FvH4_4g01970 Fragaria vesca HOM05D007346 ORTHO05D009044 3.8e-88 328.9 242 71.5
FAN12G2737 Fragaria x ananassa HOM05D007346 ORTHO05D009044 2.5e-79 299.7 242 64.5
FvH4_4g01590 Fragaria vesca HOM05D007346 ORTHO05D009044 3.2e-79 299.3 242 64.5
RcHm_v2.0_Chr4g0393391 Rosa chinensis HOM05D007346 ORTHO05D009044 5.0e-64 248.8 242 55.4
RcHm_v2.0_Chr4g0393001 Rosa chinensis HOM05D007346 ORTHO05D009044 1.8e-61 240.4 244 53.7
RcHm_v2.0_Chr4g0393471 Rosa chinensis HOM05D007346 ORTHO05D009044 6.8e-61 238.4 259 51.7
FAN22G1923 Fragaria x ananassa HOM05D007346 ORTHO05D009044 1.6e-57 227.3 213 61.0
RcHm_v2.0_Chr5g0063131 Rosa chinensis HOM05D007346 ORTHO05D009044 4.3e-55 219.2 253 48.6
RcHm_v2.0_Chr4g0388171 Rosa chinensis HOM05D007346 ORTHO05D009044 6.4e-51 205.3 239 47.7
FvH4_4g02150 Fragaria vesca HOM05D007346 ORTHO05D009044 2.0e-44 183.7 243 51.0
FAN17G0274 Fragaria x ananassa HOM05D007346 ORTHO05D009044 1.7e-43 180.6 210 53.3
FvH4_4g01551 Fragaria vesca HOM05D007346 ORTHO05D009044 2.2e-43 180.3 238 45.4
RcHm_v2.0_Chr4g0388141 Rosa chinensis HOM05D007346 ORTHO05D009044 3.2e-34 149.8 190 48.4
FAN22G0819 Fragaria x ananassa HOM05D007346 ORTHO05D009044 3.5e-33 146.4 235 40.4
FAN17G3078 Fragaria x ananassa HOM05D007346 ORTHO05D009044 4.6e-33 146.0 244 40.2
FAN17G0806 Fragaria x ananassa HOM05D007346 ORTHO05D009044 7.8e-33 145.2 243 41.6
RcHm_v2.0_Chr6g0254611 Rosa chinensis HOM05D007346 ORTHO05D009044 4.4e-28 129.4 216 38.4
RcHm_v2.0_Chr6g0254631 Rosa chinensis HOM05D007346 ORTHO05D009044 4.4e-28 129.4 216 38.4
Prupe.8G151600 Prunus persica HOM05D007346 ORTHO05D009044 9.9e-28 128.3 215 37.7
RcHm_v2.0_Chr6g0247891 Rosa chinensis HOM05D007346 ORTHO05D009044 9.9e-28 128.3 211 38.4
Prupe.8G152400 Prunus persica HOM05D007346 ORTHO05D009044 1.9e-26 124.0 215 36.7
FvH4_2g03062 Fragaria vesca HOM05D007346 ORTHO05D009044 1.9e-23 114.0 211 35.5
FAN24G2319 Fragaria x ananassa HOM05D007346 ORTHO05D009044 9.6e-23 111.7 211 35.1
FAN18G1252 Fragaria x ananassa HOM05D007346 ORTHO05D009044 2.8e-22 110.2 216 37.0
FAN25G0093 Fragaria x ananassa HOM05D007346 ORTHO05D009044 2.8e-22 110.2 222 35.6
FAN21G1548 Fragaria x ananassa HOM05D007346 ORTHO05D009044 4.8e-22 109.4 222 35.6
FAN24G3266 Fragaria x ananassa HOM05D007346 ORTHO05D009044 1.8e-21 107.5 206 34.0
FvH4_2g16551 Fragaria vesca HOM05D007346 ORTHO05D009044 6.9e-21 105.5 206 34.0
FAN12G1544 Fragaria x ananassa HOM05D007346 ORTHO05D009044 6.9e-21 105.5 85 63.5
FvH4_2g04880 Fragaria vesca HOM05D007346 ORTHO05D009044 4.5e-20 102.8 222 36.5
FAN24G1006 Fragaria x ananassa HOM05D007346 ORTHO05D009044 4.5e-20 102.8 222 36.5
Haze_02115 Corylus avellana HOM05D007346 ORTHO05D009044 9.9e-20 101.7 221 32.1
RcHm_v2.0_Chr6g0254551 Rosa chinensis HOM05D007346 ORTHO05D009044 9.9e-20 101.7 219 37.4
FAN15G1854 Fragaria x ananassa HOM05D007346 ORTHO05D009044 3.8e-19 99.8 204 32.4
Haze_02114 Corylus avellana HOM05D007346 ORTHO05D009044 4.9e-19 99.4 215 31.6
RcHm_v2.0_Chr6g0254681 Rosa chinensis HOM05D007346 ORTHO05D009044 1.1e-18 98.2 188 37.8
Cfa005319 Carpinus fangiana HOM05D007346 ORTHO05D009044 5.4e-18 95.9 217 30.9
FAN20G2910 Fragaria x ananassa HOM05D007346 ORTHO05D009044 9.3e-18 95.1 233 30.5
FAN15G1511 Fragaria x ananassa HOM05D007346 ORTHO05D009044 1.6e-17 94.4 222 32.4
Cfa005279 Carpinus fangiana HOM05D007346 ORTHO05D009044 3.5e-17 93.2 216 30.1
FvH4_2g16550 Fragaria vesca HOM05D007346 ORTHO05D009044 4.6e-17 92.8 224 32.6
Cfa005278 Carpinus fangiana HOM05D007346 ORTHO05D009044 1.3e-16 91.3 221 29.0
FvH4_2g04887 Fragaria vesca HOM05D007346 ORTHO05D009044 1.3e-16 91.3 179 35.2
FvH4_5g33551 Fragaria vesca HOM05D007346 ORTHO05D009044 1.3e-16 91.3 227 32.2
FAN15G1755 Fragaria x ananassa HOM05D007346 ORTHO05D009044 1.3e-16 91.3 224 32.6
FvH4_2g03731 Fragaria vesca HOM05D007346 ORTHO05D009044 1.8e-16 90.9 222 31.5
FAN24G3549 Fragaria x ananassa HOM05D007346 ORTHO05D009044 1.8e-16 90.9 230 31.3
Duzib132G1061 Durio zibethinus HOM05D007346 ORTHO05D009044 1.1e-15 88.2 217 29.5
Thecc.02G045400 Theobroma cacao HOM05D007346 ORTHO05D009044 1.1e-15 88.2 208 31.2
FAN12G1074 Fragaria x ananassa HOM05D007346 ORTHO05D009044 1.5e-15 87.8 85 51.8
FvH4_2g16580 Fragaria vesca HOM05D007346 ORTHO05D009044 3.3e-15 86.7 230 30.4
FvH4_7g08620 Fragaria vesca HOM05D007346 ORTHO05D009044 7.4e-15 85.5 202 32.2
FAN24G3164 Fragaria x ananassa HOM05D007346 ORTHO05D009044 9.6e-15 85.1 182 29.7
FvH4_2g04271 Fragaria vesca HOM05D007346 ORTHO05D009044 1.3e-14 84.7 228 29.4
FAN06G1165 Fragaria x ananassa HOM05D007346 ORTHO05D009044 2.1e-14 84.0 222 30.6
MD17G1018900 Malus domestica HOM05D007346 ORTHO05D009044 2.8e-14 83.6 193 34.7
TAR636G0219 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.8e-14 83.6 209 27.8
TAR636G2580 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.8e-14 83.6 209 27.8
Thecc.02G045200 Theobroma cacao HOM05D007346 ORTHO05D009044 4.0e-13 79.7 209 29.2
FAN12G0212 Fragaria x ananassa HOM05D007346 ORTHO05D009044 1.2e-12 78.2 175 33.1
TAR636G0813 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.0e-12 77.4 198 26.3
Gohir.A05G279800 Gossypium hirsutum HOM05D007346 ORTHO05D009044 3.4e-12 76.6 217 27.6
Gorai.009G294800 Gossypium raimondii HOM05D007346 ORTHO05D009044 4.5e-12 76.3 240 27.1
TWI56G0047 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 4.5e-12 76.3 217 25.3
MD03G1012300 Malus domestica HOM05D007346 ORTHO05D009044 7.6e-12 75.5 216 32.4
FvH4_4g01581 Fragaria vesca HOM05D007346 ORTHO05D009044 1.3e-11 74.7 149 32.9
Cfa012527 Carpinus fangiana HOM05D007346 ORTHO05D009044 2.2e-11 73.9 187 28.3
Gohir.D05G281400 Gossypium hirsutum HOM05D007346 ORTHO05D009044 3.8e-11 73.2 217 27.2
Duzib248G1625 Durio zibethinus HOM05D007346 ORTHO05D009044 6.5e-11 72.4 65 47.7
Gorai.009G294900 Gossypium raimondii HOM05D007346 ORTHO05D009044 6.5e-11 72.4 217 27.2
Nn6g31858 Nelumbo nucifera HOM05D000151 ORTHO05D000074 1.4e-10 71.2 224 27.7
Sopen12g006910 Solanum pennellii HOM05D000151 ORTHO05D000074 4.2e-10 69.7 203 24.1
MBI19_g33448_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 1.2e-09 68.2 86 38.4
QL01p002550 Quercus lobata HOM05D000151 ORTHO05D000074 1.2e-09 68.2 222 23.9
Nitab4.5_0001179g0150 Nicotiana tabacum HOM05D000151 ORTHO05D000074 2.1e-09 67.4 172 24.4
SGA_v2.0_scaffold32G13300 Striga asiatica HOM05D028864 ORTHO05D009044 6.0e-09 65.9 80 35.0
TWI56G0068 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 6.0e-09 65.9 221 23.1
TAR626G1713 Trochodendron aralioides HOM05D000151 ORTHO05D000074 6.0e-09 65.9 198 24.2
TWI59G0144 Tripterygium wilfordii HOM05D007346 ORTHO05D009044 1.0e-08 65.1 90 41.1
FvH4_5g33621 Fragaria vesca HOM05D007346 ORTHO05D035450 1.8e-08 64.3 110 33.6
TAR628G1200 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.8e-08 64.3 79 40.5
Atru.chr5.3529 Acer truncatum HOM05D007346 ORTHO05D009044 2.3e-08 63.9 110 34.5
MBI12_g28746_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 2.3e-08 63.9 78 41.0
SGA_v2.0_scaffold32G13296 Striga asiatica HOM05D028864 ORTHO05D009044 2.3e-08 63.9 84 35.7
FAN15G1822 Fragaria x ananassa HOM05D007346 ORTHO05D035758 3.9e-08 63.2 76 46.1
Prupe.1G358000 Prunus persica HOM05D000151 ORTHO05D000074 3.9e-08 63.2 80 36.2
Aqoxy7G00556 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 5.1e-08 62.8 195 28.2
Dinv28404 Davidia involucrata HOM05D000151 ORTHO05D000074 5.1e-08 62.8 217 22.1
Aqoxy2G01392 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 6.7e-08 62.4 205 24.4
Aqoxy4G02688 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 6.7e-08 62.4 224 23.2
FvH4_2g06581 Fragaria vesca HOM05D007346 ORTHO05D009044 6.7e-08 62.4 181 25.4
QL09p049374 Quercus lobata HOM05D000151 ORTHO05D000074 8.7e-08 62.0 223 26.9
TWI56G0115 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 8.7e-08 62.0 85 41.2
TPR.G38190 Trifolium pratense HOM05D000151 ORTHO05D000074 1.1e-07 61.6 76 39.5
MBI11_g05443_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 1.5e-07 61.2 78 37.2
RcHm_v2.0_Chr6g0303821 Rosa chinensis HOM05D000151 ORTHO05D000074 1.5e-07 61.2 80 35.0
MD08G1006100 Malus domestica HOM05D000151 ORTHO05D000074 1.9e-07 60.8 80 36.2
MD15G1005500 Malus domestica HOM05D000151 ORTHO05D000074 1.9e-07 60.8 80 36.2
Potri.002G015700 Populus trichocarpa HOM05D000151 ORTHO05D000074 1.9e-07 60.8 83 36.1
Peaxi162Scf00119g00111 Petunia axillaris HOM05D000151 ORTHO05D000074 2.5e-07 60.5 210 22.4
FAN20G1383 Fragaria x ananassa HOM05D000151 ORTHO05D000074 3.3e-07 60.1 80 35.0
MBI18_g19078_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 3.3e-07 60.1 146 28.1
Peaxi162Scf00074g00631 Petunia axillaris HOM05D000151 ORTHO05D000074 3.3e-07 60.1 225 26.2
Zm00001eb122000 Zea mays HOM05D000151 ORTHO05D000074 3.3e-07 60.1 190 24.2
Ciclev10030189m.g Citrus clementina HOM05D007346 ORTHO05D009044 4.3e-07 59.7 82 35.4
Thhalv10002259m.g Eutrema salsugineum HOM05D001286 ORTHO05D000440 4.3e-07 59.7 203 27.6
TWI12G0155 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 4.3e-07 59.7 89 33.7
TAR362G0800 Trochodendron aralioides HOM05D000151 ORTHO05D000074 5.7e-07 59.3 79 36.7
TAR636G0046 Trochodendron aralioides HOM05D000151 ORTHO05D000074 5.7e-07 59.3 80 36.2
Cfa014025 Carpinus fangiana HOM05D000151 ORTHO05D000074 9.6e-07 58.5 83 37.3
Nitab4.5_0000058g0110 Nicotiana tabacum HOM05D000151 ORTHO05D000074 1.6e-06 57.8 198 22.2
TAR636G1120 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.6e-06 57.8 80 37.5
CSS0022996 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 2.1e-06 57.4 224 23.2
Dinv28403 Davidia involucrata HOM05D000151 ORTHO05D000074 2.1e-06 57.4 211 20.4
Potri.002G014500 Populus trichocarpa HOM05D000151 ORTHO05D000074 2.1e-06 57.4 81 38.3
Rhsim02G0223700 Rhododendron simsii HOM05D000151 ORTHO05D000074 2.1e-06 57.4 198 22.7
Sabra02G0011500 Salix brachista HOM05D000151 ORTHO05D000074 2.1e-06 57.4 81 40.7
TAR636G2429 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.1e-06 57.4 81 37.0
FAN27G0425 Fragaria x ananassa HOM05D007346 ORTHO05D009044 3.7e-06 56.6 50 50.0
Sopen04g035970 Solanum pennellii HOM05D000151 ORTHO05D000074 3.7e-06 56.6 201 23.9
Peaxi162Scf00119g01111 Petunia axillaris HOM05D000151 ORTHO05D000074 4.8e-06 56.2 211 20.9
Ah.15g090840 Amaranthus hybridus HOM05D001286 ORTHO05D000440 6.2e-06 55.8 78 32.1
EL10Ac7g16907 Beta vulgaris HOM05D001286 ORTHO05D000440 8.2e-06 55.5 88 29.5
Solyc04g082060.4 Solanum lycopersicum HOM05D000151 ORTHO05D000074 8.2e-06 55.5 91 29.7
Sopen04g035710 Solanum pennellii HOM05D000151 ORTHO05D000074 8.2e-06 55.5 91 29.7
TAR626G0819 Trochodendron aralioides HOM05D000151 ORTHO05D000074 8.2e-06 55.5 77 36.4


User provided reference genes

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