Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G3038 Fragaria x ananassa HOM05D006650 ORTHO05D008401 4.3e-156 554.7 291 100.0
FAN07G0603 Fragaria x ananassa HOM05D006650 ORTHO05D008401 3.2e-151 538.5 291 96.9
FAN12G1321 Fragaria x ananassa HOM05D006650 ORTHO05D008401 3.0e-141 505.4 297 91.6
FAN22G1912 Fragaria x ananassa HOM05D006650 ORTHO05D008401 6.7e-133 477.6 335 80.3
FvH4_4g28590 Fragaria vesca HOM05D006650 ORTHO05D008401 1.1e-130 470.3 266 94.4
RcHm_v2.0_Chr4g0436681 Rosa chinensis HOM05D006650 ORTHO05D008401 1.2e-129 466.8 299 86.6
Prupe.1G299800 Prunus persica HOM05D006650 ORTHO05D008401 1.1e-116 423.7 300 77.0
MD13G1052300 Malus domestica HOM05D006650 ORTHO05D008401 4.5e-113 411.8 294 76.9
Cfa008806 Carpinus fangiana HOM05D006650 ORTHO05D008401 4.5e-105 385.2 303 69.0
CANSAT64G2403 Cannabis sativa HOM05D006650 ORTHO05D008401 3.3e-100 369.0 303 66.7
QL03p046578 Quercus lobata HOM05D006650 ORTHO05D008401 1.5e-97 360.1 297 66.3
CiPaw.05G118400 Carya illinoinensis HOM05D006650 ORTHO05D008401 1.7e-96 356.7 281 69.0
Glyma.02G128500 Glycine max HOM05D006650 ORTHO05D008401 4.4e-92 342.0 297 63.6
ClCG08G004790 Citrullus lanatus HOM05D006650 ORTHO05D008401 1.8e-90 336.7 285 65.6
CsaV3_6G003950 Cucumis sativus L. HOM05D006650 ORTHO05D008401 1.2e-89 334.0 252 70.2
Medtr6g021510 Medicago truncatula HOM05D006650 ORTHO05D008401 7.7e-89 331.3 291 62.9
Manes.14G094300 Manihot esculenta HOM05D006650 ORTHO05D008401 1.7e-88 330.1 297 61.3
Sed0026335 Sechium edule HOM05D006650 ORTHO05D008401 1.7e-88 330.1 265 66.4
Lalb_Chr10g0099501 Lupinus albus HOM05D006650 ORTHO05D008401 2.9e-88 329.3 296 63.5
Phvul.003G034600 Phaseolus vulgaris HOM05D006650 ORTHO05D008401 3.8e-88 328.9 295 62.7
Atru.chr11.1444 Acer truncatum HOM05D006650 ORTHO05D008401 5.0e-88 328.6 288 62.5
Ca_04377_v3 Cicer arietinum L. HOM05D006650 ORTHO05D008401 2.5e-87 326.2 298 61.4
arahy.Tifrunner.gnm1.ann1.1PS8SX Arachis hypogaea HOM05D006650 ORTHO05D008401 3.2e-87 325.9 299 61.5
Psat1g085040 Pisum sativum HOM05D006650 ORTHO05D008401 1.2e-86 323.9 300 62.0
arahy.Tifrunner.gnm1.ann1.P12GZY Arachis hypogaea HOM05D006650 ORTHO05D008401 2.7e-86 322.8 301 60.1
Ciclev10032286m.g Citrus clementina HOM05D006650 ORTHO05D008401 8.0e-86 321.2 289 60.6
MELO3C011665.2 Cucumis melo HOM05D006650 ORTHO05D008401 1.0e-85 320.9 277 64.3
TWI75G1831 Tripterygium wilfordii HOM05D006650 ORTHO05D008401 1.0e-85 320.9 294 62.2
Dinv27412 Davidia involucrata HOM05D006650 ORTHO05D008401 1.8e-85 320.1 232 69.4
Lj2g0026821 Lotus japonicus HOM05D006650 ORTHO05D008401 2.3e-85 319.7 292 61.3
Potri.T046554 Populus trichocarpa HOM05D006650 ORTHO05D008401 4.8e-83 312.0 305 59.3
Sabra08G0083500 Salix brachista HOM05D006650 ORTHO05D008401 8.3e-83 311.2 307 59.3
Rhsim09G0116700 Rhododendron simsii HOM05D006650 ORTHO05D008401 1.4e-82 310.5 302 59.6
Hma1.2p1_1424F.1_g282740 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 5.3e-82 308.5 216 72.2
Potri.008G109700 Populus trichocarpa HOM05D006650 ORTHO05D008401 5.3e-82 308.5 307 58.6
TPR.G21643 Trifolium pratense HOM05D006650 ORTHO05D008401 1.2e-81 307.4 293 59.4
Rhsim09G0116200 Rhododendron simsii HOM05D006650 ORTHO05D008401 2.7e-81 306.2 297 59.3
MD16G1057600 Malus domestica HOM05D006650 ORTHO05D008401 3.5e-81 305.8 220 75.0
COL.COLO4_27715 Corchorus olitorius HOM05D006650 ORTHO05D008401 1.3e-80 303.9 299 56.9
Duzib248G0229 Durio zibethinus HOM05D006650 ORTHO05D008401 2.2e-80 303.1 279 59.9
Aqoxy3G03817 Aquilegia oxysepala HOM05D006650 ORTHO05D008401 3.8e-80 302.4 293 57.0
Actinidia32425 Actinidia chinensis HOM05D006650 ORTHO05D008401 1.9e-79 300.1 240 66.2
Thhalv10008392m.g Eutrema salsugineum HOM05D006650 ORTHO05D008401 1.9e-79 300.1 240 65.4
Gohir.A04G144800 Gossypium hirsutum HOM05D006650 ORTHO05D008401 1.9e-79 300.1 302 57.6
THA.LOC104821976 Tarenaya hassleriana HOM05D006650 ORTHO05D008401 1.2e-78 297.4 293 57.7
PSO063G6309 Papaver somniferum HOM05D006650 ORTHO05D008401 1.6e-78 297.0 236 67.8
Gorai.012G184600 Gossypium raimondii HOM05D006650 ORTHO05D008401 2.1e-78 296.6 297 57.9
PGR119G1187 Punica granatum HOM05D006650 ORTHO05D008401 2.7e-78 296.2 295 58.6
ATR0691G055 Amborella trichopoda HOM05D006650 ORTHO05D008401 3.6e-78 295.8 213 69.0
PSO782G4155 Papaver somniferum HOM05D006650 ORTHO05D008401 6.1e-78 295.0 236 67.8
Thecc.02G315100 Theobroma cacao HOM05D006650 ORTHO05D008401 1.8e-77 293.5 289 58.8
Cc11_g11090 Coffea canephora HOM05D006650 ORTHO05D008401 8.8e-77 291.2 297 54.2
Sp1g22480 Schrenkiella parvula HOM05D006650 ORTHO05D008401 8.8e-77 291.2 244 62.3
AL1G39570 Arabidopsis lyrata HOM05D006650 ORTHO05D008401 1.2e-76 290.8 238 63.9
CARHR025730 Cardamine hirsuta HOM05D006650 ORTHO05D008401 3.4e-76 289.3 254 61.8
DCAR_023721 Daucus carota HOM05D006650 ORTHO05D008401 3.4e-76 289.3 259 62.5
Gohir.D04G189300 Gossypium hirsutum HOM05D006650 ORTHO05D008401 4.4e-76 288.9 297 57.2
GSVIVG01012028001 Vitis vinifera HOM05D006650 ORTHO05D008401 9.8e-76 287.7 193 74.6
Carub.0001s2478 Capsella rubella HOM05D006650 ORTHO05D008401 2.8e-75 286.2 206 69.4
HanXRQChr15g0475871 Helianthus annuus HOM05D006650 ORTHO05D008401 4.8e-75 285.4 290 56.2
ECA246G1261 Erigeron canadensis HOM05D006650 ORTHO05D008401 6.3e-75 285.0 237 63.3
BolC3t19565H Brassica oleracea HOM05D006650 ORTHO05D008401 8.3e-75 284.6 237 62.4
Nitab4.5_0008828g0010 Nicotiana tabacum HOM05D006650 ORTHO05D008401 9.1e-74 281.2 296 56.4
Nitab4.5_0000259g0270 Nicotiana tabacum HOM05D006650 ORTHO05D008401 1.2e-73 280.8 254 61.8
CAN.G184.36 Capsicum annuum HOM05D006650 ORTHO05D008401 1.0e-72 277.7 239 60.7
VMungo1215G2545 Vigna mungo HOM05D006650 ORTHO05D008401 2.9e-72 276.2 220 67.3
Migut.L01126 Erythranthe guttata HOM05D006650 ORTHO05D008401 1.9e-71 273.5 211 66.4
Sopen05g006230 Solanum pennellii HOM05D006650 ORTHO05D008401 3.3e-71 272.7 211 66.4
TAR371G1079 Trochodendron aralioides HOM05D006650 ORTHO05D008401 4.2e-71 272.3 212 66.5
TAR371G0285 Trochodendron aralioides HOM05D006650 ORTHO05D008401 5.5e-71 271.9 212 66.0
C03p72670 Brassica napus HOM05D006650 ORTHO05D008401 1.2e-70 270.8 261 56.7
MSTRG.800 Avicennia marina HOM05D006650 ORTHO05D008401 1.0e-69 267.7 213 64.3
Os02g0326000 Oryza sativa ssp. japonica HOM05D006650 ORTHO05D008401 5.2e-69 265.4 207 63.8
Zm00001eb379060 Zea mays HOM05D006650 ORTHO05D008401 4.9e-67 258.8 224 60.7
unitig_22.g6887 Utricularia gibba HOM05D006650 ORTHO05D008401 1.1e-66 257.7 229 58.1
Sc11g0002870 Simmondsia chinensis HOM05D006650 ORTHO05D008401 1.4e-66 257.3 259 58.3
vmacro10492 Vaccinium macrocarpon HOM05D006650 ORTHO05D008401 7.0e-66 255.0 344 49.1
Hma1.2p1_1424F.1_g282730 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 3.5e-65 252.7 290 52.4
Hma1.2p1_1459F.1_g284910 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 3.5e-65 252.7 290 52.4
Lsat_1_v5_gn_3_61200 Lactuca sativa HOM05D006650 ORTHO05D008401 3.5e-65 252.7 316 49.4
Lj8A100G102 Lonicera japonica HOM05D006650 ORTHO05D008401 5.9e-65 251.9 383 44.9
Dinv16555 Davidia involucrata HOM05D006650 ORTHO05D008401 1.3e-64 250.8 175 73.1
Oeu054561.2 Olea europaea HOM05D006650 ORTHO05D008401 2.9e-64 249.6 282 52.1
AagrBONN_evm.TU.Sc2ySwM_228.1783 Anthoceros agrestis HOM05D006650 ORTHO05D008401 6.6e-64 248.4 217 59.0
Pp3c15_17200 Physcomitrium patens HOM05D006650 ORTHO05D008401 9.5e-63 244.6 211 58.3
Mapoly0001s0402 Marchantia polymorpha HOM05D006650 ORTHO05D008401 2.1e-62 243.4 211 60.2
CSS0028658 Camellia sinensis var. sinensis HOM05D006650 ORTHO05D008401 6.8e-61 238.4 189 65.6
Aa31LG7G8830 Aethionema arabicum HOM05D006650 ORTHO05D008401 1.5e-60 237.3 205 61.0
BraA08t34664Z Brassica rapa HOM05D006650 ORTHO05D008401 4.4e-60 235.7 194 63.4
Atru.chr11.1474 Acer truncatum HOM05D006650 ORTHO05D008401 1.7e-59 233.8 176 69.3
A08p27180 Brassica napus HOM05D006650 ORTHO05D008401 2.2e-59 233.4 237 57.0
DCAR_026698 Daucus carota HOM05D006650 ORTHO05D008401 2.4e-58 229.9 242 57.9
SMO239G0062 Selaginella moellendorffii HOM05D006650 ORTHO05D008401 7.0e-58 228.4 202 56.9
Haze_11820 Corylus avellana HOM05D006650 ORTHO05D008401 3.0e-56 223.0 191 66.5
SalBow8G0131 Salvia bowleyana HOM05D006650 ORTHO05D008401 8.6e-56 221.5 281 48.0
Peaxi162Scf00188g00428 Petunia axillaris HOM05D006650 ORTHO05D008401 1.1e-55 221.1 241 54.4
Ah.02g127370 Amaranthus hybridus HOM05D006650 ORTHO05D008401 1.4e-53 214.2 232 54.7
SGA_v2.0_scaffold16G07854 Striga asiatica HOM05D006650 ORTHO05D008401 2.0e-52 210.3 233 53.2
MBI15_g22709_MAGBIO Magnolia biondii HOM05D006650 ORTHO05D008401 4.1e-50 202.6 133 75.9
CDE02G2218 Ceratophyllum demersum HOM05D002187 ORTHO05D002243 1.7e-48 197.2 154 65.6
AUR62007783 Chenopodium quinoa HOM05D006650 ORTHO05D008401 3.0e-48 196.4 204 55.9
AUR62002977 Chenopodium quinoa HOM05D006650 ORTHO05D008401 5.6e-47 192.2 209 54.1
AT1G26180 Arabidopsis thaliana HOM05D006650 ORTHO05D008401 1.2e-41 174.5 174 55.2
CBR_g18672 Chara braunii HOM05D006650 ORTHO05D008401 1.6e-41 174.1 201 46.8
PGSC0003DMG400007519 Solanum tuberosum HOM05D006650 ORTHO05D008401 6.0e-41 172.2 139 64.0
HPP92_021645 Vanilla planifolia HOM05D006650 ORTHO05D008401 3.9e-40 169.5 233 46.8
EL10Ac6g14586 Beta vulgaris HOM05D006650 ORTHO05D008401 1.2e-38 164.5 259 43.6
AagrBONN_evm.TU.Sc2ySwM_228.1786 Anthoceros agrestis HOM05D006650 ORTHO05D008401 6.2e-38 162.2 143 56.6
Nn4g23629 Nelumbo nucifera HOM05D006650 ORTHO05D008401 5.2e-37 159.1 180 56.7
CBR_g25761 Chara braunii HOM05D006650 ORTHO05D008401 6.4e-35 152.1 180 47.2
Cpa.g.sc1.261 Carica papaya HOM05D006650 ORTHO05D008401 1.0e-32 144.8 172 54.1
SalBow8G0120 Salvia bowleyana HOM05D006650 ORTHO05D008401 9.6e-31 138.3 299 37.1
CARHR153660 Cardamine hirsuta HOM05D006650 ORTHO05D008401 3.6e-30 136.3 116 60.3
Cre07.g340150 Chlamydomonas reinhardtii HOM05D006650 ORTHO05D008401 4.6e-25 119.4 186 39.2
Hund05792 Selenicereus undatus HOM05D006650 ORTHO05D008401 7.8e-25 118.6 113 54.0
MCO03G393 Micromonas commoda HOM05D006650 ORTHO05D008401 2.1e-22 110.5 178 36.0
PRCOL_00002951 Prasinoderma coloniale HOM05D006650 ORTHO05D008401 9.9e-20 101.7 192 34.9
TAR629G1747 Trochodendron aralioides HOM05D006650 ORTHO05D000624 1.6e-17 94.4 78 62.8
Sabra10G0102400 Salix brachista HOM05D006650 ORTHO05D008401 1.8e-13 80.9 88 51.1
Peaxi162Scf00004g02825 Petunia axillaris HOM05D006650 ORTHO05D008401 9.3e-10 68.6 69 56.5
Zm00001eb068230 Zea mays HOM05D000001 ORTHO05D000003 1.6e-09 67.8 53 60.4
Eucgr.G02394 Eucalyptus grandis HOM05D006650 ORTHO05D008401 2.7e-09 67.0 56 64.3


User provided reference genes

Program Settings