Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G2984 Fragaria x ananassa HOM05D005988 ORTHO05D007392 2.5e-74 282.0 135 100.0
FAN07G1208 Fragaria x ananassa HOM05D005988 ORTHO05D007392 3.6e-73 278.1 135 98.5
FAN12G0190 Fragaria x ananassa HOM05D005988 ORTHO05D007392 4.7e-73 277.7 135 97.8
FAN22G1192 Fragaria x ananassa HOM05D005988 ORTHO05D007392 3.9e-51 204.9 97 97.9
FvH4_4g23770 Fragaria vesca HOM05D005988 ORTHO05D007392 2.1e-49 199.1 92 100.0
RcHm_v2.0_Chr4g0430261 Rosa chinensis HOM05D005988 ORTHO05D007392 1.2e-47 193.4 94 93.6
CiPaw.05G109900 Carya illinoinensis HOM05D005988 ORTHO05D007392 1.9e-42 176.0 89 88.8
Prupe.1G225900 Prunus persica HOM05D005988 ORTHO05D007392 1.2e-41 173.3 94 81.9
Cfa009369 Carpinus fangiana HOM05D005988 ORTHO05D007392 1.4e-40 169.9 89 84.3
Haze_12418 Corylus avellana HOM05D005988 ORTHO05D007392 1.4e-40 169.9 89 84.3
MD16G1119100 Malus domestica HOM05D005988 ORTHO05D007392 5.2e-40 167.9 84 88.1
Glyma.05G147302 Glycine max HOM05D005988 ORTHO05D007392 2.6e-39 165.6 85 85.9
CANSAT01G3258 Cannabis sativa HOM05D005988 ORTHO05D007392 4.4e-39 164.9 90 82.2
Glyma.08G104300 Glycine max HOM05D005988 ORTHO05D007392 4.4e-39 164.9 85 84.7
Nitab4.5_0006506g0010 Nicotiana tabacum HOM05D005988 ORTHO05D007392 4.4e-39 164.9 93 79.6
PSO017G5437 Papaver somniferum HOM05D005988 ORTHO05D007392 4.4e-39 164.9 94 78.7
TPR.G34164 Trifolium pratense HOM05D005988 ORTHO05D007392 5.8e-39 164.5 85 84.7
Ca_18034_v3 Cicer arietinum L. HOM05D005988 ORTHO05D007392 7.6e-39 164.1 85 83.5
Manes.13G012300 Manihot esculenta HOM05D005988 ORTHO05D007392 7.6e-39 164.1 86 84.9
MELO3C011867.2 Cucumis melo HOM05D005988 ORTHO05D007392 9.9e-39 163.7 83 88.0
COL.COLO4_20400 Corchorus olitorius HOM05D005988 ORTHO05D007392 1.3e-38 163.3 86 83.7
Phvul.L002046 Phaseolus vulgaris HOM05D005988 ORTHO05D007392 1.3e-38 163.3 85 84.7
Hma1.2p1_0065F.1_g035500 Hydrangea macrophylla HOM05D005988 ORTHO05D007392 1.7e-38 162.9 83 86.7
Thecc.02G210500 Theobroma cacao HOM05D005988 ORTHO05D007392 1.7e-38 162.9 89 79.8
Psat0s2314g0040 Pisum sativum HOM05D005988 ORTHO05D007392 2.2e-38 162.5 85 83.5
Sed0026530 Sechium edule HOM05D005988 ORTHO05D007392 2.2e-38 162.5 83 86.7
PGSC0003DMG400017679 Solanum tuberosum HOM05D005988 ORTHO05D007392 2.9e-38 162.2 87 82.8
ClCG11G013680 Citrullus lanatus HOM05D005988 ORTHO05D007392 3.8e-38 161.8 84 83.3
Gohir.D02G149200 Gossypium hirsutum HOM05D005988 ORTHO05D007392 3.8e-38 161.8 86 83.7
Gorai.005G167100 Gossypium raimondii HOM05D005988 ORTHO05D007392 3.8e-38 161.8 86 83.7
Solyc04g045620.3 Solanum lycopersicum HOM05D005988 ORTHO05D007392 3.8e-38 161.8 87 83.9
Sopen04g017580 Solanum pennellii HOM05D005988 ORTHO05D007392 3.8e-38 161.8 87 83.9
Gohir.A03G126200 Gossypium hirsutum HOM05D005988 ORTHO05D007392 4.9e-38 161.4 86 83.7
DCAR_031202 Daucus carota HOM05D005988 ORTHO05D007392 6.4e-38 161.0 83 86.7
Potri.001G055400 Populus trichocarpa HOM05D005988 ORTHO05D007392 6.4e-38 161.0 86 83.7
CsaV3_5G030290 Cucumis sativus L. HOM05D005988 ORTHO05D007392 8.4e-38 160.6 84 83.3
Sabra03G0126500 Salix brachista HOM05D005988 ORTHO05D007392 8.4e-38 160.6 86 83.7
Aqoxy3G00796 Aquilegia oxysepala HOM05D005988 ORTHO05D007392 1.1e-37 160.2 83 81.9
Manes.12G011400 Manihot esculenta HOM05D005988 ORTHO05D007392 1.1e-37 160.2 86 81.4
TPR.G17077 Trifolium pratense HOM05D005988 ORTHO05D007392 1.1e-37 160.2 85 82.4
arahy.Tifrunner.gnm1.ann1.5IUK3V Arachis hypogaea HOM05D005988 ORTHO05D007392 1.4e-37 159.8 123 61.0
Atru.chr11.2323 Acer truncatum HOM05D005988 ORTHO05D007392 1.9e-37 159.5 95 74.7
Nitab4.5_0005361g0020 Nicotiana tabacum HOM05D005988 ORTHO05D007392 1.9e-37 159.5 89 79.8
Sabra01G0040000 Salix brachista HOM05D005988 ORTHO05D007392 1.9e-37 159.5 86 82.6
arahy.Tifrunner.gnm1.ann1.NCU5C9 Arachis hypogaea HOM05D005988 ORTHO05D007392 2.4e-37 159.1 83 83.1
Cpa.g.sc43.58 Carica papaya HOM05D005988 ORTHO05D007392 2.4e-37 159.1 88 78.4
Lalb_Chr13g0294321 Lupinus albus HOM05D005988 ORTHO05D007392 2.4e-37 159.1 86 81.4
Potri.003G173000 Populus trichocarpa HOM05D005988 ORTHO05D007392 2.4e-37 159.1 86 81.4
Rhsim04G0162300 Rhododendron simsii HOM05D005988 ORTHO05D007392 2.4e-37 159.1 83 83.1
GSVIVG01010482001 Vitis vinifera HOM05D005988 ORTHO05D007392 2.4e-37 159.1 89 77.5
Medtr8g080630 Medicago truncatula HOM05D005988 ORTHO05D007392 3.2e-37 158.7 85 81.2
vmacro05591 Vaccinium macrocarpon HOM05D005988 ORTHO05D007392 3.2e-37 158.7 86 81.4
vmacro23425 Vaccinium macrocarpon HOM05D005988 ORTHO05D007392 3.2e-37 158.7 86 81.4
MBI01_g01248_MAGBIO Magnolia biondii HOM05D005988 ORTHO05D007392 4.1e-37 158.3 83 81.9
arahy.Tifrunner.gnm1.ann1.CH2TLP Arachis hypogaea HOM05D005988 ORTHO05D007392 5.4e-37 157.9 83 81.9
Cc11_g16890 Coffea canephora HOM05D005988 ORTHO05D007392 5.4e-37 157.9 90 78.9
Lalb_Chr07g0187141 Lupinus albus HOM05D005988 ORTHO05D007392 5.4e-37 157.9 83 84.3
Nn4g22324 Nelumbo nucifera HOM05D005988 ORTHO05D007392 5.4e-37 157.9 88 78.4
PGR102G1123 Punica granatum HOM05D005988 ORTHO05D007392 5.4e-37 157.9 83 81.9
vmacro01331 Vaccinium macrocarpon HOM05D005988 ORTHO05D007392 5.4e-37 157.9 83 83.1
CSS0025775 Camellia sinensis var. sinensis HOM05D005988 ORTHO05D007392 7.1e-37 157.5 83 81.9
EL10Ac2g02768 Beta vulgaris HOM05D005988 ORTHO05D007392 9.2e-37 157.1 86 79.1
Lj4g0004056 Lotus japonicus HOM05D005988 ORTHO05D007392 9.2e-37 157.1 85 78.8
Hund13388 Selenicereus undatus HOM05D005988 ORTHO05D007392 1.2e-36 156.8 84 79.8
Eucgr.B03491 Eucalyptus grandis HOM05D005988 ORTHO05D007392 2.7e-36 155.6 83 83.1
arahy.Tifrunner.gnm1.ann1.XY4E2W Arachis hypogaea HOM05D005988 ORTHO05D007392 3.5e-36 155.2 88 76.1
Rhsim12G0099600 Rhododendron simsii HOM05D005988 ORTHO05D007392 4.6e-36 154.8 83 80.7
CDE06G1110 Ceratophyllum demersum HOM05D005988 ORTHO05D007392 7.8e-36 154.1 83 78.3
Aa31sc377G10 Aethionema arabicum HOM05D005988 ORTHO05D007392 1.3e-35 153.3 84 78.6
ECA233G0411 Erigeron canadensis HOM05D005988 ORTHO05D007392 1.7e-35 152.9 83 79.5
CAN.G875.9 Capsicum annuum HOM05D005988 ORTHO05D007392 3.0e-35 152.1 83 80.7
THA.LOC109117182 Tarenaya hassleriana HOM05D005988 ORTHO05D007392 3.0e-35 152.1 86 77.9
AUR62034347 Chenopodium quinoa HOM05D005988 ORTHO05D007392 3.9e-35 151.8 83 75.9
ATR0582G290 Amborella trichopoda HOM05D005988 ORTHO05D007392 8.6e-35 150.6 86 74.4
AL2G25900 Arabidopsis lyrata HOM05D005988 ORTHO05D007392 8.6e-35 150.6 83 78.3
AT1G67350 Arabidopsis thaliana HOM05D005988 ORTHO05D007392 8.6e-35 150.6 83 78.3
CARHR059890 Cardamine hirsuta HOM05D005988 ORTHO05D007392 8.6e-35 150.6 83 78.3
BcaC03g14837 Brassica carinata HOM05D005988 ORTHO05D007392 1.1e-34 150.2 84 77.4
AUR62022358 Chenopodium quinoa HOM05D005988 ORTHO05D007392 1.1e-34 150.2 83 74.7
Thhalv10019308m.g Eutrema salsugineum HOM05D005988 ORTHO05D007392 1.1e-34 150.2 84 77.4
Sc15g0005560 Simmondsia chinensis HOM05D005988 ORTHO05D007392 1.1e-34 150.2 90 73.3
BcaB03g15204 Brassica carinata HOM05D005988 ORTHO05D007392 1.5e-34 149.8 83 78.3
BcaB05g24271 Brassica carinata HOM05D005988 ORTHO05D007392 1.5e-34 149.8 83 78.3
BcaB05g24277 Brassica carinata HOM05D005988 ORTHO05D007392 1.5e-34 149.8 83 78.3
BcaC08g46168 Brassica carinata HOM05D005988 ORTHO05D007392 1.5e-34 149.8 83 78.3
A02p14180 Brassica napus HOM05D005988 ORTHO05D007392 1.5e-34 149.8 83 78.3
A07p33950 Brassica napus HOM05D005988 ORTHO05D007392 1.5e-34 149.8 83 78.3
C02p22980 Brassica napus HOM05D005988 ORTHO05D007392 1.5e-34 149.8 83 78.3
C06p42910 Brassica napus HOM05D005988 ORTHO05D007392 1.5e-34 149.8 83 78.3
BraA02t06481Z Brassica rapa HOM05D005988 ORTHO05D007392 1.5e-34 149.8 83 78.3
Sp5g22300 Schrenkiella parvula HOM05D005988 ORTHO05D007392 1.5e-34 149.8 83 78.3
Carub.0002s1364 Capsella rubella HOM05D005988 ORTHO05D007392 3.3e-34 148.7 83 77.1
Duzib251G0424 Durio zibethinus HOM05D005988 ORTHO05D007392 3.3e-34 148.7 83 79.5
Duzib251G0426 Durio zibethinus HOM05D005988 ORTHO05D007392 4.3e-34 148.3 83 78.3
Sc15g0005760 Simmondsia chinensis HOM05D005988 ORTHO05D007392 4.3e-34 148.3 89 73.0
Ah.10g030080 Amaranthus hybridus HOM05D005988 ORTHO05D007392 7.3e-34 147.5 79 78.5
HanXRQChr12g0372221 Helianthus annuus HOM05D005988 ORTHO05D007392 7.3e-34 147.5 79 79.7
Actinidia08072 Actinidia chinensis HOM05D005988 ORTHO05D007392 9.6e-34 147.1 87 78.2
Peaxi162Scf00038g00014 Petunia axillaris HOM05D005988 ORTHO05D007392 9.6e-34 147.1 84 76.2
QL03p052764 Quercus lobata HOM05D005988 ORTHO05D007392 1.6e-33 146.4 83 75.9
MD13G1118900 Malus domestica HOM05D005988 ORTHO05D007392 2.1e-33 146.0 73 86.3
Nitab4.5_0000060g0090 Nicotiana tabacum HOM05D005988 ORTHO05D007392 3.6e-33 145.2 79 81.0
DCAR_024095 Daucus carota HOM05D005988 ORTHO05D007392 2.4e-32 142.5 78 78.2
HPP92_012485 Vanilla planifolia HOM05D005988 ORTHO05D007392 1.2e-31 140.2 87 72.4
Zm00001eb290200 Zea mays HOM05D005988 ORTHO05D007392 1.5e-31 139.8 87 73.6
Os03g0685900 Oryza sativa ssp. japonica HOM05D005988 ORTHO05D007392 7.6e-31 137.5 83 71.1
SalBow8G0976 Salvia bowleyana HOM05D005988 ORTHO05D007392 7.6e-31 137.5 83 73.5
Zm00001eb422590 Zea mays HOM05D005988 ORTHO05D007392 7.6e-31 137.5 83 72.3
unitig_62.g23652 Utricularia gibba HOM05D005988 ORTHO05D007392 1.7e-30 136.3 83 73.5
Migut.E00018 Erythranthe guttata HOM05D005988 ORTHO05D007392 7.1e-29 131.0 83 71.1
TWI75G1041 Tripterygium wilfordii HOM05D005988 ORTHO05D007392 2.3e-27 125.9 83 66.3
SGA_v2.0_scaffold144G35838 Striga asiatica HOM05D005988 ORTHO05D007392 6.6e-27 124.4 88 63.6
Lalb_Chr23g0278031 Lupinus albus HOM05D005988 ORTHO05D007392 8.7e-27 124.0 83 67.5
Lalb_Chr23g0278041 Lupinus albus HOM05D005988 ORTHO05D007392 2.5e-26 122.5 83 67.5
Lsat_1_v5_gn_7_95720 Lactuca sativa HOM05D005988 ORTHO05D007392 5.6e-26 121.3 68 72.1
TWI18G1296 Tripterygium wilfordii HOM05D005988 ORTHO05D007392 3.6e-25 118.6 83 60.2
Migut.G00897 Erythranthe guttata HOM05D005988 ORTHO05D007392 1.9e-21 106.3 70 67.1
Migut.O00848 Erythranthe guttata HOM05D005988 ORTHO05D007392 1.9e-21 106.3 70 67.1
CBR_g8533 Chara braunii HOM05D005988 ORTHO05D007392 4.2e-21 105.1 80 53.8
Pp3c3_5450 Physcomitrium patens HOM05D005988 ORTHO05D007392 7.9e-20 100.9 82 51.2
Mapoly0011s0010 Marchantia polymorpha HOM05D005988 ORTHO05D007392 1.1e-18 97.1 78 55.1
Nitab4.5_0001404g0080 Nicotiana tabacum HOM05D005988 ORTHO05D007392 4.0e-16 88.6 50 72.0
TAR629G1917 Trochodendron aralioides HOM05D000133 ORTHO05D002928 5.8e-15 84.7 54 70.4
AagrBONN_evm.TU.Sc2ySwM_117.535 Anthoceros agrestis HOM05D005988 ORTHO05D007392 1.3e-14 83.6 78 46.2
SMO356G0160 Selaginella moellendorffii HOM05D005988 ORTHO05D007392 2.2e-14 82.8 80 42.5
Actinidia30649 Actinidia chinensis HOM05D005988 ORTHO05D007392 1.5e-10 70.1 41 80.5
BcaB05g24274 Brassica carinata HOM05D005988 ORTHO05D007392 2.1e-09 66.2 83 47.0
arahy.Tifrunner.gnm1.ann1.BFR0IC Arachis hypogaea HOM05D005988 ORTHO05D007392 4.5e-07 58.5 56 46.4
Zm00001eb053260 Zea mays HOM05D005988 ORTHO05D007392 2.2e-06 56.2 36 69.4
Zm00001eb053240 Zea mays HOM05D005988 ORTHO05D007392 3.8e-06 55.5 36 66.7


User provided reference genes

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