Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G2965 Fragaria x ananassa HOM05D007967 ORTHO05D008195 4.2e-56 221.1 108 100.0
FvH4_4g02960 Fragaria vesca HOM05D007967 ORTHO05D008195 1.3e-54 216.1 108 97.2
FAN12G4039 Fragaria x ananassa HOM05D007967 ORTHO05D008195 1.8e-54 215.7 108 97.2
FAN22G1743 Fragaria x ananassa HOM05D007967 ORTHO05D008195 1.5e-53 212.6 108 96.3
FAN12G0154 Fragaria x ananassa HOM05D007967 ORTHO05D008195 2.2e-49 198.7 99 97.0
RcHm_v2.0_Chr4g0391021 Rosa chinensis HOM05D007967 ORTHO05D008195 4.6e-47 191.0 108 88.9
Prupe.1G033100 Prunus persica HOM05D007967 ORTHO05D008195 5.1e-30 134.4 106 68.9
CiPaw.01G189400 Carya illinoinensis HOM05D007967 ORTHO05D008195 1.9e-24 115.9 106 61.3
Glyma.20G201800 Glycine max HOM05D007967 ORTHO05D008195 2.6e-18 95.5 105 50.5
Glyma.10G188900 Glycine max HOM05D007967 ORTHO05D008195 7.7e-18 94.0 106 50.9
Glyma.20G201900 Glycine max HOM05D007967 ORTHO05D008195 1.3e-17 93.2 105 48.6
Glyma.20G202000 Glycine max HOM05D007967 ORTHO05D008195 1.7e-17 92.8 105 51.4
TAR362G0007 Trochodendron aralioides HOM05D007967 ORTHO05D008195 1.7e-17 92.8 106 52.8
Cfa008369 Carpinus fangiana HOM05D007967 ORTHO05D008195 3.8e-17 91.7 108 53.7
Phvul.002G096432 Phaseolus vulgaris HOM05D007967 ORTHO05D008195 1.4e-16 89.7 105 48.6
Haze_11312 Corylus avellana HOM05D007967 ORTHO05D008195 9.4e-16 87.0 100 53.0
Medtr1g073770 Medicago truncatula HOM05D007967 ORTHO05D008195 9.4e-16 87.0 105 48.6
Manes.15G037400 Manihot esculenta HOM05D007967 ORTHO05D008195 1.2e-15 86.7 107 51.4
Cfa008371 Carpinus fangiana HOM05D007967 ORTHO05D008195 2.7e-15 85.5 97 53.6
Rhsim04G0189300 Rhododendron simsii HOM05D007967 ORTHO05D008195 3.6e-15 85.1 107 46.7
COL.COLO4_15804 Corchorus olitorius HOM05D007967 ORTHO05D008195 6.1e-15 84.3 106 46.2
Atru.chr4.2184 Acer truncatum HOM05D007967 ORTHO05D008195 8.0e-15 84.0 103 49.5
QL06p015921 Quercus lobata HOM05D007967 ORTHO05D008195 6.7e-14 80.9 109 46.8
Glyma.10G188700 Glycine max HOM05D007967 ORTHO05D008195 8.8e-14 80.5 105 44.8
TAR636G0109 Trochodendron aralioides HOM05D007967 ORTHO05D008195 8.8e-14 80.5 107 44.9
Thecc.04G247600 Theobroma cacao HOM05D007967 ORTHO05D008195 2.6e-13 79.0 107 49.5
Potri.008G163200 Populus trichocarpa HOM05D007967 ORTHO05D008195 3.3e-13 78.6 105 48.6
Potri.010G075100 Populus trichocarpa HOM05D007967 ORTHO05D008195 3.3e-13 78.6 105 48.6
Manes.03G168300 Manihot esculenta HOM05D007967 ORTHO05D008195 5.7e-13 77.8 105 45.7
Psat6g132560 Pisum sativum HOM05D007967 ORTHO05D008195 7.4e-13 77.4 105 41.9
Cpa.g.sc44.111 Carica papaya HOM05D007967 ORTHO05D008195 6.3e-12 74.3 105 44.8
Phvul.L001649 Phaseolus vulgaris HOM05D007967 ORTHO05D008195 6.3e-12 74.3 105 40.0
Nn3g19573 Nelumbo nucifera HOM05D007967 ORTHO05D008195 1.1e-11 73.6 101 41.6
Medtr1g073780 Medicago truncatula HOM05D007967 ORTHO05D008195 5.3e-11 71.2 73 50.7
TAR406G0009 Trochodendron aralioides HOM05D007967 ORTHO05D008195 7.0e-11 70.9 89 42.7
TAR636G2334 Trochodendron aralioides HOM05D007967 ORTHO05D008195 7.0e-11 70.9 95 46.3
PGR004G1043 Punica granatum HOM05D007967 ORTHO05D008195 1.2e-10 70.1 117 39.3
Phvul.002G096366 Phaseolus vulgaris HOM05D007967 ORTHO05D008195 1.6e-10 69.7 105 42.9
Lj6g0026326 Lotus japonicus HOM05D007967 ORTHO05D008195 2.6e-10 68.9 92 45.7
MELO3C006461.2 Cucumis melo HOM05D007967 ORTHO05D008195 5.9e-10 67.8 102 44.1
Cfa008368 Carpinus fangiana HOM05D007967 ORTHO05D008195 1.3e-09 66.6 70 54.3
Medtr1g044470 Medicago truncatula HOM05D007967 ORTHO05D008195 2.2e-09 65.9 89 43.8
CsaV3_3G012510 Cucumis sativus L. HOM05D007967 ORTHO05D008195 2.9e-09 65.5 95 45.3
Aqoxy5G00298 Aquilegia oxysepala HOM05D007967 ORTHO05D008195 3.8e-09 65.1 73 49.3
Ca_11940_v3 Cicer arietinum L. HOM05D007967 ORTHO05D008195 1.1e-08 63.5 83 43.4
Ciclev10006313m.g Citrus clementina HOM05D007967 ORTHO05D008195 1.9e-08 62.8 104 40.4
TPR.G28758 Trifolium pratense HOM05D007967 ORTHO05D008195 1.9e-08 62.8 70 42.9
TWI12G0012 Tripterygium wilfordii HOM05D007967 ORTHO05D008195 2.5e-08 62.4 99 43.4
Glyma.10G008600 Glycine max HOM05D007967 ORTHO05D008195 5.5e-08 61.2 74 41.9
ATR0665G602 Amborella trichopoda HOM05D033159 ORTHO05D008195 7.2e-08 60.8 96 37.5
Ca_09811_v3 Cicer arietinum L. HOM05D007967 ORTHO05D008195 9.4e-08 60.5 67 52.2
Ca_30492_v3 Cicer arietinum L. HOM05D007967 ORTHO05D008195 9.4e-08 60.5 67 52.2
PGSC0003DMG400016351 Solanum tuberosum HOM05D007967 ORTHO05D008195 2.1e-07 59.3 78 39.7
VMungo0720G1177 Vigna mungo HOM05D007967 ORTHO05D008195 4.7e-07 58.2 86 41.9
Sabra19G0017200 Salix brachista HOM05D007517 ORTHO05D006922 6.1e-07 57.8 69 44.9
Sed0013305 Sechium edule HOM05D007967 ORTHO05D008195 6.1e-07 57.8 88 42.0
Nn3g19570 Nelumbo nucifera HOM05D013994 ORTHO05D008195 8.0e-07 57.4 80 41.2
Sabra10G0033700 Salix brachista HOM05D007967 ORTHO05D008195 8.0e-07 57.4 78 44.9
Sabra19G0025300 Salix brachista HOM05D007517 ORTHO05D006922 8.0e-07 57.4 74 44.6
Sed0019170 Sechium edule HOM05D007967 ORTHO05D008195 8.0e-07 57.4 64 43.8
Migut.G00444 Erythranthe guttata HOM05D007967 ORTHO05D008195 1.0e-06 57.0 80 40.0
TPR.G26453 Trifolium pratense HOM05D007967 ORTHO05D008195 1.4e-06 56.6 63 46.0
Cfa002385 Carpinus fangiana HOM05D013698 ORTHO05D008195 1.8e-06 56.2 103 34.0
Nn1g02662 Nelumbo nucifera HOM05D007967 ORTHO05D008195 2.3e-06 55.8 111 35.1
Glyma.10G188800 Glycine max HOM05D007967 ORTHO05D008195 3.0e-06 55.5 77 40.3
Nn5g27498 Nelumbo nucifera HOM05D013994 ORTHO05D008195 3.0e-06 55.5 98 39.8


User provided reference genes

Program Settings