Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G2955 Fragaria x ananassa HOM05D005919 ORTHO05D007176 0.0e+00 1119.0 552 100.0
FAN12G4285 Fragaria x ananassa HOM05D005919 ORTHO05D007176 0.0e+00 1091.6 552 97.1
FAN12G0251 Fragaria x ananassa HOM05D005919 ORTHO05D007176 7.6e-312 1073.2 552 96.0
FvH4_4g09660 Fragaria vesca HOM05D005919 ORTHO05D007176 4.5e-311 1070.5 552 96.0
FAN22G0736 Fragaria x ananassa HOM05D005919 ORTHO05D007176 1.3e-307 1058.9 566 94.2
RcHm_v2.0_Chr4g0404951 Rosa chinensis HOM05D005919 ORTHO05D007176 9.9e-287 989.6 553 89.0
Prupe.1G097400 Prunus persica HOM05D005919 ORTHO05D007176 5.1e-267 924.1 553 81.7
MD16G1262500 Malus domestica HOM05D005919 ORTHO05D007176 9.0e-256 886.7 553 79.0
CANSAT11G0901 Cannabis sativa HOM05D005919 ORTHO05D007176 1.0e-243 846.7 549 75.6
QL02p095651 Quercus lobata HOM05D005919 ORTHO05D007176 1.0e-235 820.1 533 75.0
GSVIVG01023723001 Vitis vinifera HOM05D005919 ORTHO05D007176 3.9e-235 818.1 552 72.8
Duzib150G0612 Durio zibethinus HOM05D005919 ORTHO05D007176 3.1e-232 808.5 543 72.6
Manes.15G095400 Manihot esculenta HOM05D005919 ORTHO05D007176 3.1e-232 808.5 548 73.0
Actinidia02641 Actinidia chinensis HOM05D005919 ORTHO05D007176 7.0e-232 807.4 513 75.8
Thecc.09G160900 Theobroma cacao HOM05D005919 ORTHO05D007176 1.5e-229 799.7 512 74.8
Atru.chr7.495 Acer truncatum HOM05D005919 ORTHO05D007176 1.0e-227 793.5 519 74.4
TAR383G0301 Trochodendron aralioides HOM05D005919 ORTHO05D007176 5.2e-227 791.2 525 72.2
Rhsim01G0012200 Rhododendron simsii HOM05D005919 ORTHO05D007176 2.6e-226 788.9 513 73.7
Ciclev10007971m.g Citrus clementina HOM05D005919 ORTHO05D007176 5.7e-226 787.7 552 71.9
Eucgr.C00228 Eucalyptus grandis HOM05D005919 ORTHO05D007176 2.2e-225 785.8 532 70.3
Gohir.A06G079400 Gossypium hirsutum HOM05D005919 ORTHO05D007176 2.4e-224 782.3 547 70.2
Hma1.2p1_1531F.1_g289233 Hydrangea macrophylla HOM05D005919 ORTHO05D007176 5.3e-224 781.2 539 69.9
Cc06_g14010 Coffea canephora HOM05D005919 ORTHO05D007176 4.5e-223 778.1 546 68.5
PGSC0003DMG401011224 Solanum tuberosum HOM05D005919 ORTHO05D007176 4.5e-223 778.1 552 68.7
Gorai.010G092100 Gossypium raimondii HOM05D005919 ORTHO05D007176 1.3e-222 776.5 561 68.6
Potri.018G098700 Populus trichocarpa HOM05D005919 ORTHO05D007176 1.3e-222 776.5 549 70.9
CsaV3_1G028860 Cucumis sativus L. HOM05D005919 ORTHO05D007176 2.2e-222 775.8 522 70.9
CAN.G1870.2 Capsicum annuum HOM05D005919 ORTHO05D007176 2.9e-222 775.4 552 68.3
TWI53G0694 Tripterygium wilfordii HOM05D005919 ORTHO05D007176 3.8e-222 775.0 550 68.9
ClCG09G013740 Citrullus lanatus HOM05D005919 ORTHO05D007176 1.5e-221 773.1 544 68.6
HanXRQChr09g0244361 Helianthus annuus HOM05D005919 ORTHO05D007176 1.5e-221 773.1 548 68.1
Solyc07g006330.2 Solanum lycopersicum HOM05D005919 ORTHO05D007176 3.2e-221 771.9 552 68.5
MELO3C005285.2 Cucumis melo HOM05D005919 ORTHO05D007176 4.2e-221 771.5 520 71.0
Lj4g0016840 Lotus japonicus HOM05D005919 ORTHO05D007176 5.5e-221 771.2 507 72.0
Cfa013547 Carpinus fangiana HOM05D005919 ORTHO05D007176 7.2e-221 770.8 525 73.0
PGR042G2595 Punica granatum HOM05D005919 ORTHO05D007176 1.6e-220 769.6 531 70.8
Sed0019098 Sechium edule HOM05D005919 ORTHO05D007176 2.7e-220 768.8 539 68.8
Lsat_1_v5_gn_7_51941 Lactuca sativa HOM05D005919 ORTHO05D007176 3.6e-220 768.5 506 72.3
Aqoxy7G03239_Aqoxy7G03240 Aquilegia oxysepala HOM05D005919 ORTHO05D007176 8.0e-220 767.3 538 68.4
Medtr4g129500 Medicago truncatula HOM05D005919 ORTHO05D007176 2.3e-219 765.8 522 70.3
Psat4g048080 Pisum sativum HOM05D005919 ORTHO05D007176 8.8e-219 763.8 524 71.6
CSS0021645 Camellia sinensis var. sinensis HOM05D005919 ORTHO05D007176 1.2e-218 763.5 490 75.5
VMungo1215G1350 Vigna mungo HOM05D005919 ORTHO05D007176 1.5e-218 763.1 507 72.6
AUR62013597 Chenopodium quinoa HOM05D005919 ORTHO05D007176 7.5e-218 760.8 509 68.8
PSO063G4858 Papaver somniferum HOM05D005919 ORTHO05D007176 9.8e-218 760.4 513 69.4
Phvul.003G151000 Phaseolus vulgaris HOM05D005919 ORTHO05D007176 1.3e-217 760.0 528 70.1
ECA240G3021 Erigeron canadensis HOM05D005919 ORTHO05D007176 2.2e-217 759.2 538 67.5
TPR.G5290 Trifolium pratense HOM05D005919 ORTHO05D007176 2.2e-217 759.2 546 68.1
Cpa.g.sc42.125 Carica papaya HOM05D005919 ORTHO05D007176 4.8e-217 758.1 518 71.6
EL10Ac1g01561 Beta vulgaris HOM05D005919 ORTHO05D007176 6.3e-217 757.7 510 68.8
Nitab4.5_0005985g0040 Nicotiana tabacum HOM05D005919 ORTHO05D007176 6.3e-217 757.7 516 69.6
Nitab4.5_0005551g0020 Nicotiana tabacum HOM05D005919 ORTHO05D007176 3.1e-216 755.4 566 66.6
Sc02g0003990 Simmondsia chinensis HOM05D005919 ORTHO05D007176 5.4e-216 754.6 511 71.0
Nn2g12541 Nelumbo nucifera HOM05D005919 ORTHO05D007176 2.7e-215 752.3 549 67.0
THA.LOC104819083 Tarenaya hassleriana HOM05D005919 ORTHO05D007176 2.7e-215 752.3 511 71.4
Lalb_Chr12g0199061 Lupinus albus HOM05D005919 ORTHO05D007176 4.5e-215 751.5 509 70.9
MSTRG.26243 Avicennia marina HOM05D005919 ORTHO05D007176 5.9e-215 751.1 548 66.2
Glyma.13G091700 Glycine max HOM05D005919 ORTHO05D007176 5.9e-215 751.1 544 67.5
Peaxi162Scf00525g00821 Petunia axillaris HOM05D005919 ORTHO05D007176 2.2e-214 749.2 550 66.7
Aa31LG11G14640 Aethionema arabicum HOM05D005919 ORTHO05D007176 8.5e-214 747.3 520 69.6
arahy.Tifrunner.gnm1.ann1.L1AVC7 Arachis hypogaea HOM05D005919 ORTHO05D007176 1.2e-212 743.4 510 71.6
AL6G25620 Arabidopsis lyrata HOM05D005919 ORTHO05D007176 2.7e-212 742.3 514 69.1
arahy.Tifrunner.gnm1.ann1.KJ1SMN Arachis hypogaea HOM05D005919 ORTHO05D007176 4.7e-212 741.5 510 71.6
Ca_21183_v3 Cicer arietinum L. HOM05D005919 ORTHO05D007176 4.7e-212 741.5 494 72.3
Lj9A728G22 Lonicera japonica HOM05D005919 ORTHO05D007176 4.7e-212 741.5 546 67.0
arahy.Tifrunner.gnm1.ann1.7FR1J2 Arachis hypogaea HOM05D005919 ORTHO05D007176 1.0e-211 740.3 510 71.4
BcaNung03092 Brassica carinata HOM05D005919 ORTHO05D007176 4.0e-211 738.4 515 69.5
BcaC03g13443 Brassica carinata HOM05D005919 ORTHO05D007176 1.5e-210 736.5 512 69.9
Carub.0006s1300 Capsella rubella HOM05D005919 ORTHO05D007176 2.0e-210 736.1 515 68.5
BraA02t05246Z Brassica rapa HOM05D005919 ORTHO05D007176 1.8e-208 729.6 545 66.4
Haze_22168 Corylus avellana HOM05D005919 ORTHO05D007176 1.8e-208 729.6 533 69.0
Thhalv10013155m.g Eutrema salsugineum HOM05D005919 ORTHO05D007176 1.8e-208 729.6 518 68.9
BolC2t06667H Brassica oleracea HOM05D005919 ORTHO05D007176 5.4e-208 728.0 519 68.8
A02p02750 Brassica napus HOM05D005919 ORTHO05D007176 9.1e-208 727.2 545 66.1
arahy.Tifrunner.gnm1.ann1.F7IW15 Arachis hypogaea HOM05D005919 ORTHO05D007176 5.9e-207 724.5 511 69.1
Sp6g29230 Schrenkiella parvula HOM05D005919 ORTHO05D007176 1.0e-206 723.8 520 68.5
Migut.K00275 Erythranthe guttata HOM05D005919 ORTHO05D007176 1.3e-206 723.4 553 64.4
Oeu035674.1 Olea europaea HOM05D005919 ORTHO05D007176 3.6e-204 715.3 511 68.3
AT5G14850 Arabidopsis thaliana HOM05D005919 ORTHO05D007176 1.4e-203 713.4 492 69.5
arahy.Tifrunner.gnm1.ann1.WJA0QS Arachis hypogaea HOM05D005919 ORTHO05D007176 2.3e-203 712.6 498 70.3
ATR0824G006 Amborella trichopoda HOM05D005919 ORTHO05D007176 3.0e-198 695.7 550 62.2
PSO782G2448 Papaver somniferum HOM05D005919 ORTHO05D007176 2.5e-197 692.6 471 68.8
SHI02981 Sapria himalayana HOM05D005919 ORTHO05D007176 4.3e-197 691.8 489 67.5
C02p07360 Brassica napus HOM05D005919 ORTHO05D007176 7.3e-197 691.0 488 68.9
Dinv43316 Davidia involucrata HOM05D005919 ORTHO05D007176 1.4e-195 686.8 469 71.2
Dinv41305 Davidia involucrata HOM05D005919 ORTHO05D007176 9.8e-194 680.6 432 77.1
HPP92_021127 Vanilla planifolia HOM05D005919 ORTHO05D007176 1.0e-190 670.6 526 62.7
FAN07G1390 Fragaria x ananassa HOM05D005919 ORTHO05D007176 3.7e-185 652.1 487 72.9
Zm00001eb229730 Zea mays HOM05D005919 ORTHO05D007176 1.6e-183 646.7 511 62.2
Hund26692 Selenicereus undatus HOM05D005919 ORTHO05D007176 5.2e-179 631.7 576 54.7
SGA_v2.0_scaffold7G04062 Striga asiatica HOM05D005919 ORTHO05D007176 3.5e-175 619.0 552 57.4
DCAR_011759 Daucus carota HOM05D005919 ORTHO05D007176 1.3e-174 617.1 425 70.8
SalBow1G6099 Salvia bowleyana HOM05D005919 ORTHO05D007176 5.8e-170 601.7 433 66.3
Os01g0580100 Oryza sativa ssp. japonica HOM05D005919 ORTHO05D007176 2.9e-169 599.4 501 59.1
Mapoly0152s0016 Marchantia polymorpha HOM05D005919 ORTHO05D007176 3.5e-167 592.4 541 53.4
Sopen07g002420 Solanum pennellii HOM05D005919 ORTHO05D007176 7.8e-167 591.3 381 73.0
Oeu031853.1 Olea europaea HOM05D005919 ORTHO05D007176 1.7e-166 590.1 391 71.9
CiPaw.07G186600 Carya illinoinensis HOM05D005919 ORTHO05D007176 1.9e-165 586.6 379 74.4
Hma1.2p1_1531F.1_g289236 Hydrangea macrophylla HOM05D005919 ORTHO05D007176 1.3e-164 583.9 432 67.6
Pp3c10_23620 Physcomitrium patens HOM05D005919 ORTHO05D007176 6.4e-161 571.6 535 53.3
Pp3c10_23630 Physcomitrium patens HOM05D005919 ORTHO05D007176 6.4e-161 571.6 535 53.3
SMO172G0226 Selaginella moellendorffii HOM05D005919 ORTHO05D007176 6.0e-159 565.1 497 55.3
CARHR198500 Cardamine hirsuta HOM05D005919 ORTHO05D007176 6.2e-156 555.1 383 71.8
Zm00001eb229670 Zea mays HOM05D005919 ORTHO05D007176 7.9e-151 538.1 446 59.4
MD13G1260800 Malus domestica HOM05D005919 ORTHO05D007176 2.4e-147 526.6 446 61.4
Dinv42785 Davidia involucrata HOM05D005919 ORTHO05D007176 1.0e-145 521.2 353 71.1
CDE02G0068 Ceratophyllum demersum HOM05D005919 ORTHO05D007176 1.3e-145 520.8 380 66.6
Gohir.D06G079000 Gossypium hirsutum HOM05D005919 ORTHO05D007176 4.8e-140 502.3 552 51.3
vmacro13072 Vaccinium macrocarpon HOM05D005919 ORTHO05D007176 5.7e-133 478.8 539 51.9
SGA_v2.0_scaffold87G27166 Striga asiatica HOM05D005919 ORTHO05D007176 2.8e-132 476.5 500 50.8
COL.COLO4_04535 Corchorus olitorius HOM05D005919 ORTHO05D007176 1.5e-122 444.1 285 74.0
MCO09G503 Micromonas commoda HOM05D005919 ORTHO05D007176 1.8e-86 324.3 464 39.7
arahy.Tifrunner.gnm1.ann1.IETZ0A Arachis hypogaea HOM05D005919 ORTHO05D007176 7.8e-82 308.9 219 70.8
arahy.Tifrunner.gnm1.ann1.I3IQB6 Arachis hypogaea HOM05D005919 ORTHO05D007176 1.9e-75 287.7 238 60.5
Glyma.17G068567 Glycine max HOM05D005919 ORTHO05D007176 6.6e-65 252.7 189 65.1
arahy.Tifrunner.gnm1.ann1.8I3VMK Arachis hypogaea HOM05D005919 ORTHO05D007176 1.6e-58 231.5 201 58.7
Sabra18G0085400 Salix brachista HOM05D005919 ORTHO05D007176 1.7e-52 211.5 154 68.8
Glyma.17G068633 Glycine max HOM05D005919 ORTHO05D007176 2.7e-50 204.1 196 56.1
Actinidia20955 Actinidia chinensis HOM05D005919 ORTHO05D007176 4.8e-47 193.4 129 68.2
CDE02G3325 Ceratophyllum demersum HOM05D005919 ORTHO05D007176 2.4e-46 191.0 125 67.2
Psat4g010400 Pisum sativum HOM05D005919 ORTHO05D007176 5.8e-45 186.4 124 70.2
AUR62026693 Chenopodium quinoa HOM05D005919 ORTHO05D007176 1.1e-43 182.2 116 70.7
PRCOL_00000120 Prasinoderma coloniale HOM05D000722 ORTHO05D007176 7.9e-42 176.0 499 29.3
GSVIVG01023746001 Vitis vinifera HOM05D005919 ORTHO05D007176 3.5e-34 150.6 90 76.7
DCAR_017944 Daucus carota HOM05D005919 ORTHO05D007176 2.4e-30 137.9 140 55.0
Zm00001eb050560 Zea mays HOM05D005919 ORTHO05D007176 7.6e-29 132.9 107 58.9
Zm00001eb260780 Zea mays HOM05D005919 ORTHO05D007176 7.6e-29 132.9 107 58.9
Zm00001eb302550 Zea mays HOM05D005919 ORTHO05D007176 7.6e-29 132.9 107 58.9
Actinidia15384 Actinidia chinensis HOM05D005919 ORTHO05D007176 1.3e-25 122.1 86 67.4
Rhsim01G0011300 Rhododendron simsii HOM05D005919 ORTHO05D007176 1.9e-24 118.2 76 72.4
AL1G16380 Arabidopsis lyrata HOM05D005919 ORTHO05D007176 1.1e-22 112.5 81 65.4
Psat4g048040 Pisum sativum HOM05D005919 ORTHO05D007176 1.1e-11 75.9 56 58.9
SMO145G0125 Selaginella moellendorffii HOM05D009274 ORTHO05D011512 1.1e-11 75.9 299 28.4
SMO117G0345 Selaginella moellendorffii HOM05D006213 ORTHO05D008107 1.5e-08 65.5 283 23.7
Nitab4.5_0004837g0040 Nicotiana tabacum HOM05D006213 ORTHO05D008107 3.3e-08 64.3 222 28.8
QL04p029079 Quercus lobata HOM05D006213 ORTHO05D008107 1.7e-07 62.0 221 28.1
HPP92_020680 Vanilla planifolia HOM05D006213 ORTHO05D008107 1.7e-07 62.0 233 26.2
BcaC07g42336 Brassica carinata HOM05D006213 ORTHO05D008107 2.2e-07 61.6 116 31.0
SalBow5G4694 Salvia bowleyana HOM05D006213 ORTHO05D008107 2.8e-07 61.2 232 28.9
Prupe.2G122100 Prunus persica HOM05D006213 ORTHO05D008107 3.7e-07 60.8 190 30.0
TWI14G1148 Tripterygium wilfordii HOM05D006213 ORTHO05D008107 4.8e-07 60.5 283 26.1
Actinidia30939 Actinidia chinensis HOM05D006213 ORTHO05D008107 6.3e-07 60.1 202 27.2
Duzib133G0253 Durio zibethinus HOM05D006213 ORTHO05D008107 1.1e-06 59.3 230 27.0
GSVIVG01018298001 Vitis vinifera HOM05D006213 ORTHO05D008107 1.1e-06 59.3 226 27.9
arahy.Tifrunner.gnm1.ann1.SKJX1Q Arachis hypogaea HOM05D006213 ORTHO05D008107 1.8e-06 58.5 242 27.3
BolC8t49386H Brassica oleracea HOM05D005597 ORTHO05D007304 1.8e-06 58.5 325 25.8
COL.COLO4_12385 Corchorus olitorius HOM05D006213 ORTHO05D008107 1.8e-06 58.5 233 26.6
FAN03G1287 Fragaria x ananassa HOM05D006213 ORTHO05D008107 1.8e-06 58.5 229 27.9
Oeu037443.2 Olea europaea HOM05D006213 ORTHO05D008107 1.8e-06 58.5 234 26.9
BcaC07g38821 Brassica carinata HOM05D005597 ORTHO05D007304 2.4e-06 58.2 325 25.8
C08p17610 Brassica napus HOM05D005597 ORTHO05D007304 2.4e-06 58.2 325 25.8
Manes.05G056250 Manihot esculenta HOM05D006213 ORTHO05D008107 2.4e-06 58.2 222 27.0
Aa31LG1G11550 Aethionema arabicum HOM05D006213 ORTHO05D008107 3.1e-06 57.8 213 26.8
Gohir.D08G160600 Gossypium hirsutum HOM05D006213 ORTHO05D008107 5.3e-06 57.0 214 25.2
Gorai.004G166900 Gossypium raimondii HOM05D006213 ORTHO05D008107 6.9e-06 56.6 214 25.2
Lalb_Chr12g0210581 Lupinus albus HOM05D006213 ORTHO05D008107 6.9e-06 56.6 222 27.5
Medtr8g007345 Medicago truncatula HOM05D006213 ORTHO05D008107 9.1e-06 56.2 101 31.7


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