Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G2931 Fragaria x ananassa HOM05D006670 ORTHO05D008715 6.7e-35 150.2 80 100.0
FAN22G1637 Fragaria x ananassa HOM05D006670 ORTHO05D008715 5.9e-31 137.1 80 95.0
FAN07G0632 Fragaria x ananassa HOM05D006670 ORTHO05D008715 7.7e-31 136.7 80 95.0
FvH4_4g05510 Fragaria vesca HOM05D006670 ORTHO05D008715 2.2e-30 135.2 80 95.0
FAN12G2738 Fragaria x ananassa HOM05D006670 ORTHO05D008715 2.2e-30 135.2 80 95.0
RcHm_v2.0_Chr4g0396631 Rosa chinensis HOM05D006670 ORTHO05D008715 1.1e-29 132.9 80 90.0
Prupe.1G056900 Prunus persica HOM05D006670 ORTHO05D008715 7.4e-26 120.2 80 80.0
Sed0004390 Sechium edule HOM05D006670 ORTHO05D008715 7.7e-23 110.2 80 76.2
MD13G1229700 Malus domestica HOM05D006670 ORTHO05D008715 1.7e-22 109.0 80 73.8
PGR083G1840 Punica granatum HOM05D006670 ORTHO05D008715 1.7e-22 109.0 80 72.5
CiPaw.01G205600 Carya illinoinensis HOM05D006670 ORTHO05D008715 2.9e-22 108.2 78 74.4
COL.COLO4_05724 Corchorus olitorius HOM05D006670 ORTHO05D008715 2.9e-22 108.2 79 70.9
Duzib212G0230 Durio zibethinus HOM05D006670 ORTHO05D008715 2.9e-22 108.2 81 69.1
Lju414A3G25 Lonicera japonica HOM05D006670 ORTHO05D008715 2.9e-22 108.2 80 73.8
Manes.15G049800 Manihot esculenta HOM05D006670 ORTHO05D008715 3.8e-22 107.8 80 72.5
MELO3C006346.2 Cucumis melo HOM05D006670 ORTHO05D008715 5.0e-22 107.5 80 70.0
CsaV3_3G011380 Cucumis sativus L. HOM05D006670 ORTHO05D008715 5.0e-22 107.5 80 70.0
Lju414A3G24 Lonicera japonica HOM05D006670 ORTHO05D008715 5.0e-22 107.5 80 72.5
Cfa014868 Carpinus fangiana HOM05D006670 ORTHO05D008715 8.5e-22 106.7 80 73.8
Haze_11539 Corylus avellana HOM05D006670 ORTHO05D008715 8.5e-22 106.7 80 73.8
Potri.001G053900 Populus trichocarpa HOM05D006670 ORTHO05D008715 1.1e-21 106.3 80 71.2
Manes.03G154700 Manihot esculenta HOM05D006670 ORTHO05D008715 1.4e-21 105.9 80 71.2
GSVIVG01029032001 Vitis vinifera HOM05D006670 ORTHO05D008715 1.4e-21 105.9 80 71.2
CSS0047689 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 1.9e-21 105.5 80 70.0
DCAR_024309 Daucus carota HOM05D006670 ORTHO05D008715 2.5e-21 105.1 80 71.2
Nn3g19866 Nelumbo nucifera HOM05D006670 ORTHO05D008715 2.5e-21 105.1 80 70.0
Actinidia25088 Actinidia chinensis HOM05D006670 ORTHO05D008715 3.2e-21 104.8 80 72.5
BcaB06g26594 Brassica carinata HOM05D006670 ORTHO05D008715 3.2e-21 104.8 80 71.2
ClCG05G003670 Citrullus lanatus HOM05D006670 ORTHO05D008715 3.2e-21 104.8 80 70.0
Thecc.04G214700 Theobroma cacao HOM05D006670 ORTHO05D008715 3.2e-21 104.8 79 69.6
Potri.003G174400 Populus trichocarpa HOM05D006670 ORTHO05D008715 4.2e-21 104.4 80 70.0
Sabra03G0127900 Salix brachista HOM05D006670 ORTHO05D008715 4.2e-21 104.4 80 70.0
Cc03_g07080 Coffea canephora HOM05D006670 ORTHO05D008715 5.5e-21 104.0 80 68.8
HanXRQChr01g0022661 Helianthus annuus HOM05D006670 ORTHO05D008715 5.5e-21 104.0 79 69.6
Lalb_Chr01g0011161 Lupinus albus HOM05D006670 ORTHO05D008715 7.2e-21 103.6 80 67.5
Phvul.007G238000 Phaseolus vulgaris HOM05D006670 ORTHO05D008715 7.2e-21 103.6 80 68.8
Ciclev10005609m.g Citrus clementina HOM05D006670 ORTHO05D008715 9.4e-21 103.2 80 68.8
Dinv27152 Davidia involucrata HOM05D006670 ORTHO05D008715 2.1e-20 102.1 80 70.0
Gohir.D10G145900 Gossypium hirsutum HOM05D006670 ORTHO05D008715 2.1e-20 102.1 80 66.2
Gorai.011G163000 Gossypium raimondii HOM05D006670 ORTHO05D008715 2.1e-20 102.1 80 66.2
QL06p022765 Quercus lobata HOM05D006670 ORTHO05D008715 2.1e-20 102.1 79 70.9
A07p08240 Brassica napus HOM05D006670 ORTHO05D008715 2.7e-20 101.7 80 68.8
PSO017G1158 Papaver somniferum HOM05D006670 ORTHO05D008715 3.6e-20 101.3 80 65.0
PSO063G6527 Papaver somniferum HOM05D006670 ORTHO05D008715 3.6e-20 101.3 80 65.0
VMungo0720G2028 Vigna mungo HOM05D006670 ORTHO05D008715 3.6e-20 101.3 80 66.2
CANSAT78G1187 Cannabis sativa HOM05D006670 ORTHO05D008715 4.7e-20 100.9 79 69.6
Aqoxy2G03824 Aquilegia oxysepala HOM05D006670 ORTHO05D008715 6.1e-20 100.5 80 66.2
Lj6g0025132 Lotus japonicus HOM05D006670 ORTHO05D008715 6.1e-20 100.5 80 66.2
Sc13g0002920 Simmondsia chinensis HOM05D006670 ORTHO05D008715 6.1e-20 100.5 82 68.3
Cpa.g.sc59.72 Carica papaya HOM05D006670 ORTHO05D008715 7.9e-20 100.1 80 66.2
Psat6g047400 Pisum sativum HOM05D006670 ORTHO05D008715 7.9e-20 100.1 80 66.2
Rhsim09G0046600 Rhododendron simsii HOM05D006670 ORTHO05D008715 7.9e-20 100.1 79 68.4
unitig_747.g21700 Utricularia gibba HOM05D006670 ORTHO05D008715 7.9e-20 100.1 80 65.0
CSS0048127 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 1.0e-19 99.8 80 66.2
Glyma.10G127400 Glycine max HOM05D006670 ORTHO05D008715 1.0e-19 99.8 80 65.0
Medtr1g046510 Medicago truncatula HOM05D006670 ORTHO05D008715 1.4e-19 99.4 80 65.0
TPR.G11296 Trifolium pratense HOM05D006670 ORTHO05D008715 1.8e-19 99.0 80 66.2
vmacro00519 Vaccinium macrocarpon HOM05D006670 ORTHO05D008715 1.8e-19 99.0 79 65.8
arahy.Tifrunner.gnm1.ann1.CI907D Arachis hypogaea HOM05D006670 ORTHO05D008715 2.3e-19 98.6 80 65.0
arahy.Tifrunner.gnm1.ann1.M1QCRY Arachis hypogaea HOM05D006670 ORTHO05D008715 2.3e-19 98.6 80 65.0
BolC7t41764H Brassica oleracea HOM05D006670 ORTHO05D008715 2.3e-19 98.6 80 67.5
Rhsim09G0047600 Rhododendron simsii HOM05D006670 ORTHO05D008715 2.3e-19 98.6 79 67.1
Hund24851 Selenicereus undatus HOM05D006670 ORTHO05D008715 2.3e-19 98.6 80 66.2
BraA07t28607Z Brassica rapa HOM05D006670 ORTHO05D008715 3.0e-19 98.2 80 66.2
Lsat_1_v5_gn_0_4721 Lactuca sativa HOM05D006670 ORTHO05D008715 3.0e-19 98.2 79 67.1
MBI10_g16834_MAGBIO Magnolia biondii HOM05D006670 ORTHO05D008715 3.0e-19 98.2 80 66.2
ECA248G0542 Erigeron canadensis HOM05D006670 ORTHO05D008715 3.9e-19 97.8 79 67.1
Peaxi162Scf00536g00711 Petunia axillaris HOM05D006670 ORTHO05D008715 3.9e-19 97.8 80 65.0
MSTRG.4202 Avicennia marina HOM05D006670 ORTHO05D008715 5.1e-19 97.4 80 63.8
Gohir.A10G120500 Gossypium hirsutum HOM05D006670 ORTHO05D008715 5.1e-19 97.4 80 62.5
RhsimUnG0181700 Rhododendron simsii HOM05D006670 ORTHO05D008715 5.1e-19 97.4 77 67.5
AUR62035928 Chenopodium quinoa HOM05D006670 ORTHO05D008715 6.7e-19 97.1 80 65.0
Ca_11808_v3 Cicer arietinum L. HOM05D006670 ORTHO05D008715 8.8e-19 96.7 81 66.7
Medtr1g046790 Medicago truncatula HOM05D006670 ORTHO05D008715 8.8e-19 96.7 80 63.8
BcaC06g35628 Brassica carinata HOM05D006670 ORTHO05D008715 1.1e-18 96.3 80 65.0
C07p12780 Brassica napus HOM05D006670 ORTHO05D008715 1.1e-18 96.3 80 65.0
Eucgr.H02870 Eucalyptus grandis HOM05D006670 ORTHO05D008715 1.1e-18 96.3 80 66.2
TAR636G1307 Trochodendron aralioides HOM05D006670 ORTHO05D008715 1.5e-18 95.9 80 63.8
AL3G39350 Arabidopsis lyrata HOM05D006670 ORTHO05D008715 2.0e-18 95.5 80 63.8
Sopen05g031980 Solanum pennellii HOM05D006670 ORTHO05D008715 2.0e-18 95.5 80 65.0
Oeu022324.1 Olea europaea HOM05D006670 ORTHO05D008715 3.3e-18 94.7 80 61.2
AUR62035321 Chenopodium quinoa HOM05D006670 ORTHO05D008715 4.4e-18 94.4 80 62.5
PGSC0003DMG400027217 Solanum tuberosum HOM05D006670 ORTHO05D008715 5.7e-18 94.0 80 63.8
PGSC0003DMG402027165 Solanum tuberosum HOM05D006670 ORTHO05D008715 5.7e-18 94.0 80 63.8
Mapoly0087s0052 Marchantia polymorpha HOM05D006670 ORTHO05D008715 7.4e-18 93.6 80 62.5
Carub.0003s2449 Capsella rubella HOM05D006670 ORTHO05D008715 9.7e-18 93.2 80 62.5
Sp3g21930 Schrenkiella parvula HOM05D006670 ORTHO05D008715 9.7e-18 93.2 80 61.2
Thhalv10002635m.g Eutrema salsugineum HOM05D006670 ORTHO05D008715 1.3e-17 92.8 78 64.1
Nitab4.5_0001769g0060 Nicotiana tabacum HOM05D006670 ORTHO05D008715 1.3e-17 92.8 80 61.2
CAN.G305.16 Capsicum annuum HOM05D006670 ORTHO05D008715 1.7e-17 92.4 80 62.5
Ah.04g153360 Amaranthus hybridus HOM05D006670 ORTHO05D008715 3.7e-17 91.3 77 67.5
AT3G24030 Arabidopsis thaliana HOM05D006670 ORTHO05D008715 3.7e-17 91.3 80 58.8
Nitab4.5_0012036g0010 Nicotiana tabacum HOM05D006670 ORTHO05D008715 4.8e-17 90.9 80 61.2
SEGI_39672 Sequoiadendron giganteum HOM05D006670 ORTHO05D008715 8.2e-17 90.1 80 62.5
THA.LOC104808732 Tarenaya hassleriana HOM05D006670 ORTHO05D008715 8.2e-17 90.1 80 61.2
CARHR100200 Cardamine hirsuta HOM05D006670 ORTHO05D008715 1.8e-16 89.0 80 60.0
Atru.chr4.1814 Acer truncatum HOM05D006670 ORTHO05D008715 3.1e-16 88.2 79 60.8
Migut.G00614 Erythranthe guttata HOM05D006670 ORTHO05D008715 4.1e-16 87.8 77 64.9
SHI00002 Sapria himalayana HOM05D006670 ORTHO05D008715 4.1e-16 87.8 79 59.5
ATR0787G198 Amborella trichopoda HOM05D006670 ORTHO05D008715 7.0e-16 87.0 80 58.8
Zm00001eb341310 Zea mays HOM05D006670 ORTHO05D008715 7.7e-15 83.6 78 59.0
Pp3c9_10780 Physcomitrium patens HOM05D006670 ORTHO05D008715 1.0e-14 83.2 80 53.8
SGA_v2.0_scaffold57G20164 Striga asiatica HOM05D006670 ORTHO05D008715 1.7e-14 82.4 78 53.8
SMO137G0262 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 3.8e-14 81.3 79 62.0
Migut.G00612 Erythranthe guttata HOM05D006670 ORTHO05D008715 5.0e-14 80.9 73 64.4
AagrBONN_evm.TU.Sc2ySwM_228.2900 Anthoceros agrestis HOM05D006670 ORTHO05D008715 7.2e-13 77.0 71 57.7
Lsat_1_v5_gn_5_180420 Lactuca sativa HOM05D006670 ORTHO05D008715 1.2e-12 76.3 75 54.7
SMO134G0250 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 6.7e-11 70.5 80 53.8
EL10Ac3g06772 Beta vulgaris HOM05D006670 ORTHO05D008715 2.4e-08 62.0 42 81.0
CDE01G0405 Ceratophyllum demersum HOM05D007853 ORTHO05D009873 1.6e-07 59.3 65 50.8
Cre06.g255350 Chlamydomonas reinhardtii HOM05D006670 ORTHO05D008715 2.0e-07 58.9 79 45.6
Psat0s5229g0080 Pisum sativum HOM05D006670 ORTHO05D006513 5.9e-07 57.4 61 47.5


User provided reference genes

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