Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G2908 Fragaria x ananassa HOM05D000990 ORTHO05D000810 8.4e-46 186.8 104 100.0
FAN07G2954 Fragaria x ananassa HOM05D000990 ORTHO05D000810 4.8e-25 117.9 51 98.0
FAN12G2538 Fragaria x ananassa HOM05D000990 ORTHO05D000810 2.0e-23 112.5 49 95.9
FvH4_4g22510 Fragaria vesca HOM05D000990 ORTHO05D000810 1.3e-19 99.8 42 97.6
RcHm_v2.0_Chr4g0428741 Rosa chinensis HOM05D000990 ORTHO05D000810 3.0e-19 98.6 42 95.2
MD16G1142200 Malus domestica HOM05D000990 ORTHO05D000810 1.8e-16 89.4 42 81.0
Prupe.1G213500 Prunus persica HOM05D000990 ORTHO05D000810 5.3e-16 87.8 42 81.0
GSVIVG01001107001 Vitis vinifera HOM05D000990 ORTHO05D000810 1.7e-14 82.8 40 80.0
Haze_12512 Corylus avellana HOM05D000990 ORTHO05D000810 3.8e-14 81.6 53 64.2
Dinv17531 Davidia involucrata HOM05D000990 ORTHO05D000810 3.8e-14 81.6 42 78.6
TAR629G1383 Trochodendron aralioides HOM05D000990 ORTHO05D000810 3.8e-14 81.6 42 71.4
QL03p048936 Quercus lobata HOM05D000990 ORTHO05D000810 1.1e-13 80.1 40 75.0
Duzib248G1283 Durio zibethinus HOM05D000990 ORTHO05D000810 1.4e-13 79.7 40 70.0
Aqoxy7G03427 Aquilegia oxysepala HOM05D000990 ORTHO05D000810 1.9e-13 79.3 42 69.0
CiPaw.05G100100 Carya illinoinensis HOM05D000990 ORTHO05D000810 1.9e-13 79.3 40 75.0
Hma1.2p1_1494F.1_g286900 Hydrangea macrophylla HOM05D000990 ORTHO05D000810 1.9e-13 79.3 40 80.0
Thecc.02G190900 Theobroma cacao HOM05D000990 ORTHO05D000810 1.9e-13 79.3 40 72.5
Atru.chr12.1438 Acer truncatum HOM05D000990 ORTHO05D000810 3.2e-13 78.6 40 75.0
Cfa009458 Carpinus fangiana HOM05D001551 ORTHO05D008917 3.2e-13 78.6 42 73.8
COL.COLO4_34045 Corchorus olitorius HOM05D000990 ORTHO05D000810 4.2e-13 78.2 40 70.0
Rhsim12G0016300 Rhododendron simsii HOM05D000990 ORTHO05D000810 7.2e-13 77.4 42 73.8
Actinidia22111 Actinidia chinensis HOM05D000990 ORTHO05D000810 1.6e-12 76.3 42 71.4
vmacro01011 Vaccinium macrocarpon HOM05D000990 ORTHO05D000810 3.6e-12 75.1 42 71.4
Gohir.A04G101900 Gossypium hirsutum HOM05D000990 ORTHO05D000810 4.6e-12 74.7 40 67.5
Gohir.D04G141100 Gossypium hirsutum HOM05D000990 ORTHO05D000810 4.6e-12 74.7 40 67.5
Gorai.012G126100 Gossypium raimondii HOM05D000990 ORTHO05D000810 4.6e-12 74.7 40 67.5
Actinidia30580 Actinidia chinensis HOM05D000990 ORTHO05D000810 6.1e-12 74.3 42 69.0
Ciclev10005792m.g Citrus clementina HOM05D000990 ORTHO05D000810 1.4e-11 73.2 40 67.5
Eucgr.B03564 Eucalyptus grandis HOM05D000990 ORTHO05D000810 3.0e-11 72.0 42 66.7
Lsat_1_v5_gn_3_32580 Lactuca sativa HOM05D000990 ORTHO05D000810 6.7e-11 70.9 40 67.5
HanXRQChr17g0540361 Helianthus annuus HOM05D000990 ORTHO05D000810 8.8e-11 70.5 40 67.5
ECA246G0727 Erigeron canadensis HOM05D000990 ORTHO05D000810 1.1e-10 70.1 40 65.0
PSO017G0194 Papaver somniferum HOM05D000990 ORTHO05D000810 1.5e-10 69.7 40 70.0
PSO478G2434 Papaver somniferum HOM05D000990 ORTHO05D000810 1.5e-10 69.7 40 70.0
HanXRQChr06g0175461 Helianthus annuus HOM05D000990 ORTHO05D000810 2.5e-10 68.9 40 65.0
Potri.001G068700 Populus trichocarpa HOM05D000990 ORTHO05D000810 3.3e-10 68.6 40 62.5
HPP92_013557 Vanilla planifolia HOM05D000990 ORTHO05D000810 5.7e-10 67.8 40 62.5
Sabra01G0048000 Salix brachista HOM05D000990 ORTHO05D000810 9.7e-10 67.0 40 57.5
Os01g0926200 Oryza sativa ssp. japonica HOM05D000990 ORTHO05D000810 8.2e-09 63.9 40 60.0
Potri.003G161600 Populus trichocarpa HOM05D000990 ORTHO05D000810 1.1e-08 63.5 40 57.5
PGR119G2150 Punica granatum HOM05D000990 ORTHO05D000810 2.4e-08 62.4 40 60.0
Zm00001eb142740 Zea mays HOM05D000990 ORTHO05D000810 1.5e-07 59.7 40 52.5
FvH4_2g19761 Fragaria vesca HOM05D000023 ORTHO05D000014 1.0e-06 57.0 27 96.3
ATR0582G151 Amborella trichopoda HOM05D000990 ORTHO05D000810 5.0e-06 54.7 40 52.5
FvH4_3g33922 Fragaria vesca HOM05D014056 ORTHO05D022566 5.0e-06 54.7 27 92.6
FvH4_5g36511 Fragaria vesca HOM05D014056 ORTHO05D022566 5.0e-06 54.7 27 92.6
FvH4_6g16931 Fragaria vesca HOM05D014056 ORTHO05D002750 5.0e-06 54.7 27 92.6


User provided reference genes

Program Settings