Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G2907 Fragaria x ananassa HOM05D006256 ORTHO05D007833 4.3e-75 284.6 151 100.0
FAN17G2911 Fragaria x ananassa HOM05D006256 ORTHO05D007833 4.3e-75 284.6 151 100.0
FAN07G0991 Fragaria x ananassa HOM05D006256 ORTHO05D007833 7.6e-72 273.9 151 97.4
FAN22G0392 Fragaria x ananassa HOM05D006256 ORTHO05D007833 1.3e-71 273.1 151 97.4
RcHm_v2.0_Chr4g0405501 Rosa chinensis HOM05D006256 ORTHO05D007833 3.8e-71 271.6 151 96.0
FvH4_4g09690 Fragaria vesca HOM05D006256 ORTHO05D007833 1.7e-68 262.7 145 96.6
Prupe.1G102100 Prunus persica HOM05D006256 ORTHO05D007833 1.1e-54 216.9 153 79.1
MD04G1052200 Malus domestica HOM05D006256 ORTHO05D007833 1.3e-47 193.4 152 74.3
CiPaw.15G164300 Carya illinoinensis HOM05D006256 ORTHO05D007833 2.5e-46 189.1 153 72.5
CsaV3_1G029200 Cucumis sativus L. HOM05D006256 ORTHO05D007833 1.1e-41 173.7 151 67.5
MELO3C010199.2 Cucumis melo HOM05D006256 ORTHO05D007833 1.4e-41 173.3 151 67.5
ClCG06G012650 Citrullus lanatus HOM05D006256 ORTHO05D007833 1.8e-41 172.9 151 67.5
Potri.018G102700 Populus trichocarpa HOM05D006256 ORTHO05D007833 1.8e-41 172.9 152 69.7
Nn2g12458 Nelumbo nucifera HOM05D006256 ORTHO05D007833 3.1e-41 172.2 151 67.5
Thecc.09G154100 Theobroma cacao HOM05D006256 ORTHO05D007833 5.3e-41 171.4 158 65.2
CANSAT11G0095 Cannabis sativa HOM05D006256 ORTHO05D007833 6.9e-41 171.0 153 68.0
Sed0025015 Sechium edule HOM05D006256 ORTHO05D007833 1.5e-40 169.9 155 65.8
CiPaw.16G106600 Carya illinoinensis HOM05D006256 ORTHO05D007833 2.0e-40 169.5 151 67.5
COL.COLO4_05401 Corchorus olitorius HOM05D006256 ORTHO05D007833 2.0e-40 169.5 155 65.2
Cfa020783 Carpinus fangiana HOM05D006256 ORTHO05D007833 1.0e-39 167.2 154 67.5
Sabra18G0088200 Salix brachista HOM05D006256 ORTHO05D007833 3.8e-39 165.2 148 66.2
Cpa.g.sc199.16 Carica papaya HOM05D006256 ORTHO05D007833 5.0e-39 164.9 152 65.1
Haze_19139 Corylus avellana HOM05D006256 ORTHO05D007833 6.5e-39 164.5 154 66.9
Manes.14G113600 Manihot esculenta HOM05D006256 ORTHO05D007833 6.5e-39 164.5 153 66.7
TAR626G0939 Trochodendron aralioides HOM05D006256 ORTHO05D007833 7.2e-38 161.0 151 63.6
Duzib187G1001 Durio zibethinus HOM05D006256 ORTHO05D007833 9.3e-38 160.6 155 62.6
Atru.chr7.353 Acer truncatum HOM05D006256 ORTHO05D007833 1.2e-37 160.2 153 65.4
A04p18400 Brassica napus HOM05D006256 ORTHO05D007833 1.6e-37 159.8 150 62.7
BraA04t17452Z Brassica rapa HOM05D006256 ORTHO05D007833 1.6e-37 159.8 150 62.7
PGR102G0560 Punica granatum HOM05D006256 ORTHO05D007833 2.1e-37 159.5 159 62.9
BolC4t26923H Brassica oleracea HOM05D006256 ORTHO05D007833 2.7e-37 159.1 150 62.7
Glyma.02G206700 Glycine max HOM05D006256 ORTHO05D007833 7.9e-37 157.5 147 66.0
C04p53670 Brassica napus HOM05D006256 ORTHO05D007833 1.8e-36 156.4 150 62.0
Sp4g02990 Schrenkiella parvula HOM05D006256 ORTHO05D007833 1.8e-36 156.4 142 66.9
TAR383G0166 Trochodendron aralioides HOM05D006256 ORTHO05D007833 1.8e-36 156.4 122 72.1
arahy.Tifrunner.gnm1.ann1.6DRS7R Arachis hypogaea HOM05D006256 ORTHO05D007833 3.0e-36 155.6 146 66.4
Dinv43283 Davidia involucrata HOM05D006256 ORTHO05D007833 5.1e-36 154.8 152 63.2
arahy.Tifrunner.gnm1.ann1.RJ4A7B Arachis hypogaea HOM05D006256 ORTHO05D007833 6.7e-36 154.5 146 66.4
Gorai.004G106500 Gossypium raimondii HOM05D006256 ORTHO05D007833 8.7e-36 154.1 132 68.2
Aa31LG7G12680 Aethionema arabicum HOM05D006256 ORTHO05D007833 1.9e-35 152.9 151 61.6
A09p56610 Brassica napus HOM05D006256 ORTHO05D007833 3.3e-35 152.1 142 64.8
BraA09t41052Z Brassica rapa HOM05D006256 ORTHO05D007833 3.3e-35 152.1 142 64.8
Gohir.D08G098900 Gossypium hirsutum HOM05D006256 ORTHO05D007833 4.3e-35 151.8 132 67.4
BcaC07g40961 Brassica carinata HOM05D006256 ORTHO05D007833 5.7e-35 151.4 142 64.8
C08p39560 Brassica napus HOM05D006256 ORTHO05D007833 5.7e-35 151.4 151 62.9
BolC8t51529H Brassica oleracea HOM05D006256 ORTHO05D007833 5.7e-35 151.4 151 62.9
Phvul.003G153700 Phaseolus vulgaris HOM05D006256 ORTHO05D007833 7.4e-35 151.0 145 66.9
THA.LOC104803911 Tarenaya hassleriana HOM05D006256 ORTHO05D007833 7.4e-35 151.0 153 61.4
VMungo1215G1943 Vigna mungo HOM05D006256 ORTHO05D007833 7.4e-35 151.0 150 66.0
CDE02G1547 Ceratophyllum demersum HOM05D006256 ORTHO05D007833 9.7e-35 150.6 150 59.3
MBI15_g35737_MAGBIO Magnolia biondii HOM05D006256 ORTHO05D007833 9.7e-35 150.6 149 61.1
Lj4g0007171 Lotus japonicus HOM05D006256 ORTHO05D007833 1.3e-34 150.2 151 62.3
CDE05G2121 Ceratophyllum demersum HOM05D006256 ORTHO05D007833 2.2e-34 149.4 152 57.9
Thhalv10000362m.g Eutrema salsugineum HOM05D006256 ORTHO05D007833 2.2e-34 149.4 150 61.3
Gohir.A08G087800 Gossypium hirsutum HOM05D006256 ORTHO05D007833 2.8e-34 149.1 132 66.7
AT2G24090 Arabidopsis thaliana HOM05D006256 ORTHO05D007833 6.3e-34 147.9 109 73.4
Glyma.17G071200 Glycine max HOM05D006256 ORTHO05D007833 6.3e-34 147.9 144 65.3
Ciclev10009792m.g Citrus clementina HOM05D006256 ORTHO05D007833 1.1e-33 147.1 148 60.8
Hma1.2p1_1084F.1_g255300 Hydrangea macrophylla HOM05D006256 ORTHO05D007833 1.4e-33 146.7 152 59.9
Actinidia38660 Actinidia chinensis HOM05D006256 ORTHO05D007833 5.3e-33 144.8 150 59.3
Eucgr.C02515 Eucalyptus grandis HOM05D006256 ORTHO05D007833 5.3e-33 144.8 149 61.1
HanXRQChr12g0357751 Helianthus annuus HOM05D006256 ORTHO05D007833 5.3e-33 144.8 147 61.2
Psat7g006560 Pisum sativum HOM05D006256 ORTHO05D007833 6.9e-33 144.4 149 61.1
CSS0035436 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 9.1e-33 144.1 146 62.3
CARHR118260 Cardamine hirsuta HOM05D006256 ORTHO05D007833 1.5e-32 143.3 131 61.8
TWI32G1056 Tripterygium wilfordii HOM05D006256 ORTHO05D007833 2.0e-32 142.9 118 68.6
vmacro06052 Vaccinium macrocarpon HOM05D006256 ORTHO05D007833 2.6e-32 142.5 148 58.8
Aqoxy7G03320 Aquilegia oxysepala HOM05D006256 ORTHO05D007833 4.5e-32 141.7 153 60.8
Lsat_1_v5_gn_5_88481 Lactuca sativa HOM05D006256 ORTHO05D007833 7.7e-32 141.0 150 61.3
AL4G14180 Arabidopsis lyrata HOM05D006256 ORTHO05D007833 1.0e-31 140.6 109 68.8
Eucgr.L01548 Eucalyptus grandis HOM05D006256 ORTHO05D007833 1.3e-31 140.2 149 60.4
Carub.0004s0326 Capsella rubella HOM05D006256 ORTHO05D007833 2.9e-31 139.0 151 57.6
Medtr4g130300 Medicago truncatula HOM05D006256 ORTHO05D007833 2.9e-31 139.0 150 61.3
HanXRQChr10g0307761 Helianthus annuus HOM05D006256 ORTHO05D007833 1.1e-30 137.1 150 59.3
AUR62025373 Chenopodium quinoa HOM05D006256 ORTHO05D007833 1.4e-30 136.7 156 58.3
EL10Ac8g18906 Beta vulgaris HOM05D006256 ORTHO05D007833 7.9e-29 131.0 161 55.3
ECA234G3762 Erigeron canadensis HOM05D006256 ORTHO05D007833 7.9e-29 131.0 111 68.5
PSO170G3639 Papaver somniferum HOM05D006256 ORTHO05D007833 2.3e-28 129.4 114 65.8
Lalb_Chr13g0300681 Lupinus albus HOM05D006256 ORTHO05D007833 3.0e-28 129.0 149 57.7
Cc06_g14490 Coffea canephora HOM05D006256 ORTHO05D007833 5.1e-28 128.3 156 54.5
SEGI_40166 Sequoiadendron giganteum HOM05D006256 ORTHO05D007833 5.1e-28 128.3 113 68.1
Nitab4.5_0006744g0050 Nicotiana tabacum HOM05D006256 ORTHO05D007833 6.7e-28 127.9 152 55.3
MSTRG.10713 Avicennia marina HOM05D006256 ORTHO05D007833 8.8e-28 127.5 154 57.1
PGSC0003DMG400011211 Solanum tuberosum HOM05D006256 ORTHO05D007833 8.8e-28 127.5 153 54.2
SGA_v2.0_scaffold222G42778 Striga asiatica HOM05D006256 ORTHO05D007833 8.8e-28 127.5 150 58.0
QL02p094215 Quercus lobata HOM05D006256 ORTHO05D007833 1.1e-27 127.1 131 64.1
Sopen07g002140 Solanum pennellii HOM05D006256 ORTHO05D007833 1.1e-27 127.1 153 54.2
Migut.K00301 Erythranthe guttata HOM05D006256 ORTHO05D007833 1.5e-27 126.7 148 55.4
Nitab4.5_0001036g0150 Nicotiana tabacum HOM05D006256 ORTHO05D007833 1.5e-27 126.7 153 54.9
Peaxi162Scf00563g00414 Petunia axillaris HOM05D006256 ORTHO05D007833 1.5e-27 126.7 153 54.2
Solyc07g006000.3 Solanum lycopersicum HOM05D006256 ORTHO05D007833 1.5e-27 126.7 153 53.6
Oeu010284.1 Olea europaea HOM05D006256 ORTHO05D007833 2.0e-27 126.3 147 55.8
PSO063G2398 Papaver somniferum HOM05D006256 ORTHO05D007833 2.6e-27 125.9 117 65.0
HPP92_010352 Vanilla planifolia HOM05D006256 ORTHO05D007833 2.6e-27 125.9 121 62.8
AUR62028378 Chenopodium quinoa HOM05D006256 ORTHO05D007833 5.7e-27 124.8 153 56.2
BcaC02g08498 Brassica carinata HOM05D006256 ORTHO05D007833 1.3e-26 123.6 150 52.7
Migut.J01392 Erythranthe guttata HOM05D006256 ORTHO05D007833 2.8e-26 122.5 150 56.7
Hund08959 Selenicereus undatus HOM05D006256 ORTHO05D007833 3.7e-26 122.1 157 54.1
Os06g0647100 Oryza sativa ssp. japonica HOM05D006256 ORTHO05D007833 4.8e-26 121.7 92 73.9
GSVIVG01012574001 Vitis vinifera HOM05D006256 ORTHO05D007833 4.1e-25 118.6 70 90.0
unitig_748.g7194 Utricularia gibba HOM05D006256 ORTHO05D007833 5.3e-25 118.2 127 59.1
Gohir.A04G058552 Gossypium hirsutum HOM05D006256 ORTHO05D007833 6.9e-25 117.9 127 59.1
SalBow1G2070 Salvia bowleyana HOM05D006256 ORTHO05D007833 6.9e-25 117.9 150 54.0
Dinv42817 Davidia involucrata HOM05D006256 ORTHO05D007833 9.1e-25 117.5 131 58.8
Zm00001eb386680 Zea mays HOM05D006256 ORTHO05D007833 9.1e-25 117.5 107 66.4
MBI15_g42789_MAGBIO Magnolia biondii HOM05D006256 ORTHO05D007833 1.2e-24 117.1 124 55.6
GSVIVG01012561001 Vitis vinifera HOM05D006256 ORTHO05D007833 1.2e-24 117.1 70 88.6
CSS0023303 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 1.0e-23 114.0 78 78.2
Actinidia33300 Actinidia chinensis HOM05D006256 ORTHO05D007833 3.6e-21 105.5 144 50.7
ATR0580G126 Amborella trichopoda HOM05D006256 ORTHO05D007833 8.8e-20 100.9 108 62.0
Ah.09g228670 Amaranthus hybridus HOM05D006256 ORTHO05D007833 1.7e-18 96.7 224 37.5
Mapoly0027s0042 Marchantia polymorpha HOM05D006256 ORTHO05D007833 2.4e-17 92.8 149 47.0
Rhsim03G0259400 Rhododendron simsii HOM05D006256 ORTHO05D007833 4.1e-17 92.0 86 62.8
CBR_g46223 Chara braunii HOM05D006256 ORTHO05D007833 5.3e-17 91.7 73 68.5
SMO164G0197 Selaginella moellendorffii HOM05D006256 ORTHO05D007833 9.1e-17 90.9 85 58.8
TPR.G24835 Trifolium pratense HOM05D006256 ORTHO05D007833 2.6e-16 89.4 124 53.2
Pp3c22_13420 Physcomitrium patens HOM05D006256 ORTHO05D007833 3.8e-15 85.5 121 45.5
CAN.G1190.22 Capsicum annuum HOM05D006256 ORTHO05D007833 5.0e-15 85.1 115 50.4
CSS0026373 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 2.7e-13 79.3 109 48.6
Cfa020782 Carpinus fangiana HOM05D006256 ORTHO05D007833 2.0e-11 73.2 91 57.1
Pp3c21_8680 Physcomitrium patens HOM05D006256 ORTHO05D007833 3.1e-09 65.9 62 58.1
Sed0004136 Sechium edule HOM05D006256 ORTHO05D007833 7.7e-08 61.2 88 43.2
SGA_v2.0_scaffold12G06024 Striga asiatica HOM05D006256 ORTHO05D007833 1.7e-07 60.1 68 54.4
Pp3c21_8670 Physcomitrium patens HOM05D004684 ORTHO05D006904 3.2e-06 55.8 91 44.0
PRCOL_00001020 Prasinoderma coloniale HOM05D006256 ORTHO05D007833 3.2e-06 55.8 61 47.5


User provided reference genes

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