Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G2874 Fragaria x ananassa HOM05D007593 ORTHO05D009686 1.2e-206 723.0 386 100.0
FvH4_4g35470 Fragaria vesca HOM05D007593 ORTHO05D009686 1.1e-178 630.2 420 85.7
FAN07G2090 Fragaria x ananassa HOM05D007593 ORTHO05D009686 1.9e-172 609.4 391 86.2
FAN22G1720 Fragaria x ananassa HOM05D007593 ORTHO05D009686 6.3e-171 604.4 404 84.4
FAN12G2740 Fragaria x ananassa HOM05D007593 ORTHO05D009686 8.5e-152 540.8 404 78.2
Prupe.1G263900 Prunus persica HOM05D007593 ORTHO05D009686 2.5e-127 459.5 403 64.5
MD13G1083000 Malus domestica HOM05D007593 ORTHO05D009686 7.5e-108 394.8 364 62.1
Thecc.02G236500 Theobroma cacao HOM05D007593 ORTHO05D009686 4.9e-99 365.5 407 54.1
FAN12G3835 Fragaria x ananassa HOM05D007593 ORTHO05D009686 1.9e-98 363.6 235 88.1
QL03p066681 Quercus lobata HOM05D007593 ORTHO05D009686 9.2e-98 361.3 456 51.3
Atru.chr11.1889 Acer truncatum HOM05D007593 ORTHO05D009686 5.6e-95 352.1 409 52.6
RcHm_v2.0_Chr4g0445111 Rosa chinensis HOM05D007593 ORTHO05D009686 2.9e-91 339.7 228 84.2
Duzib268G1169 Durio zibethinus HOM05D007593 ORTHO05D009686 6.4e-91 338.6 407 50.6
Manes.01G193300 Manihot esculenta HOM05D007593 ORTHO05D009686 6.2e-86 322.0 403 48.1
Potri.008G190600 Populus trichocarpa HOM05D007593 ORTHO05D009686 1.1e-85 321.2 415 50.4
CiPaw.06G078500 Carya illinoinensis HOM05D007593 ORTHO05D009686 2.7e-81 306.6 340 53.5
Actinidia01171 Actinidia chinensis HOM05D007593 ORTHO05D009686 3.0e-80 303.1 384 50.5
PGR102G2137 Punica granatum HOM05D007593 ORTHO05D009686 1.1e-79 301.2 406 47.5
Hma1.2p1_0289F.1_g114430 Hydrangea macrophylla HOM05D007593 ORTHO05D009686 2.4e-74 283.5 380 47.4
Sabra08G0144600 Salix brachista HOM05D007593 ORTHO05D009686 9.3e-74 281.6 410 48.0
Cpa.g.sc5.302 Carica papaya HOM05D007593 ORTHO05D009686 2.1e-73 280.4 400 44.5
Glyma.02G025300 Glycine max HOM05D007593 ORTHO05D009686 7.9e-73 278.5 317 52.1
TWI75G0370 Tripterygium wilfordii HOM05D007593 ORTHO05D009686 1.8e-72 277.3 287 55.7
Nn3g17072 Nelumbo nucifera HOM05D007593 ORTHO05D009686 3.3e-71 273.1 386 45.9
Haze_12082 Corylus avellana HOM05D007593 ORTHO05D009686 7.4e-71 271.9 385 48.6
Gorai.009G346400 Gossypium raimondii HOM05D007593 ORTHO05D009686 9.6e-71 271.6 446 42.4
RcHm_v2.0_Chr4g0445121 Rosa chinensis HOM05D007593 ORTHO05D009686 2.1e-70 270.4 160 86.2
Glyma.01G039400 Glycine max HOM05D007593 ORTHO05D009686 4.8e-70 269.2 317 50.5
Aqoxy3G00839 Aquilegia oxysepala HOM05D007593 ORTHO05D009686 2.4e-69 266.9 419 44.6
AUR62026494 Chenopodium quinoa HOM05D007593 ORTHO05D009686 5.3e-69 265.8 385 47.8
Sabra11G0071900 Salix brachista HOM05D007593 ORTHO05D009686 3.4e-68 263.1 301 54.2
AUR62026300 Chenopodium quinoa HOM05D007593 ORTHO05D009686 5.8e-68 262.3 406 45.1
Sabra11G0071700 Salix brachista HOM05D007593 ORTHO05D009686 1.3e-67 261.2 320 51.6
PSO161G0019 Papaver somniferum HOM05D007593 ORTHO05D009686 2.4e-66 256.9 373 42.6
Phvul.002G079500 Phaseolus vulgaris HOM05D007593 ORTHO05D009686 2.4e-66 256.9 302 50.0
Gohir.D05G322700 Gossypium hirsutum HOM05D007593 ORTHO05D009686 1.3e-64 251.1 394 42.6
COL.COLO4_36239 Corchorus olitorius HOM05D007593 ORTHO05D009686 9.0e-61 238.4 288 49.0
AL1G21190 Arabidopsis lyrata HOM05D007593 ORTHO05D009686 3.4e-60 236.5 294 48.3
Sc04g0008660 Simmondsia chinensis HOM05D007593 ORTHO05D009686 3.4e-60 236.5 234 56.8
Carub.0001s0986 Capsella rubella HOM05D007593 ORTHO05D009686 1.9e-58 230.7 291 48.1
EL10Ac6g13115 Beta vulgaris HOM05D007593 ORTHO05D009686 3.2e-58 229.9 368 42.7
Nitab4.5_0002542g0050 Nicotiana tabacum HOM05D007593 ORTHO05D009686 2.7e-57 226.9 389 41.1
VMungo1215G1938 Vigna mungo HOM05D007593 ORTHO05D009686 3.5e-57 226.5 281 48.8
Gohir.A05G320500 Gossypium hirsutum HOM05D007593 ORTHO05D009686 1.3e-56 224.6 308 45.8
Psat2g115200 Pisum sativum HOM05D007593 ORTHO05D009686 1.8e-56 224.2 278 48.9
BolC5t29606H Brassica oleracea HOM05D007593 ORTHO05D009686 1.1e-55 221.5 449 37.9
Rhsim12G0127800 Rhododendron simsii HOM05D007593 ORTHO05D009686 2.5e-55 220.3 382 41.1
A06p07060 Brassica napus HOM05D007593 ORTHO05D009686 1.3e-54 218.0 440 38.9
BcaC05g24886 Brassica carinata HOM05D007593 ORTHO05D009686 4.8e-54 216.1 439 37.8
Medtr5g037260 Medicago truncatula HOM05D007593 ORTHO05D009686 6.3e-54 215.7 333 42.6
GSVIVG01020118001 Vitis vinifera HOM05D007593 ORTHO05D009686 1.4e-53 214.5 167 68.9
CANSAT07G0001 Cannabis sativa HOM05D007593 ORTHO05D009686 2.4e-53 213.8 435 37.9
arahy.Tifrunner.gnm1.ann1.M4LE0B Arachis hypogaea HOM05D007593 ORTHO05D009686 1.2e-52 211.5 290 46.6
AT1G10417 Arabidopsis thaliana HOM05D007593 ORTHO05D009686 2.6e-52 210.3 292 44.9
Ciclev10032856m.g Citrus clementina HOM05D007593 ORTHO05D009686 4.5e-52 209.5 181 64.6
Lsat_1_v5_gn_8_160680 Lactuca sativa HOM05D007593 ORTHO05D009686 3.8e-51 206.5 251 49.0
Nitab4.5_0000791g0030 Nicotiana tabacum HOM05D007593 ORTHO05D009686 3.8e-51 206.5 383 38.6
C05p08550 Brassica napus HOM05D007593 ORTHO05D009686 2.5e-50 203.8 377 38.7
TAR629G1096 Trochodendron aralioides HOM05D007593 ORTHO05D009686 3.6e-49 199.9 156 68.6
Thhalv10007877m.g Eutrema salsugineum HOM05D007593 ORTHO05D009686 7.9e-49 198.7 330 41.2
CARHR010560 Cardamine hirsuta HOM05D007593 ORTHO05D009686 1.4e-48 198.0 303 42.9
BraA06t23921Z Brassica rapa HOM05D007593 ORTHO05D009686 4.1e-45 186.4 441 36.5
Ca_04684_v3 Cicer arietinum L. HOM05D007593 ORTHO05D009686 6.9e-45 185.7 167 61.1
ECA233G4970 Erigeron canadensis HOM05D007593 ORTHO05D009686 9.1e-45 185.3 411 34.1
Lj2g0003805 Lotus japonicus HOM05D007593 ORTHO05D009686 3.2e-42 176.8 317 38.5
HanXRQChr12g0371131 Helianthus annuus HOM05D007593 ORTHO05D009686 5.5e-42 176.0 182 53.8
vmacro16309 Vaccinium macrocarpon HOM05D007593 ORTHO05D009686 7.9e-41 172.2 249 45.8
Cc11_g13810 Coffea canephora HOM05D007593 ORTHO05D009686 1.4e-40 171.4 168 56.5
CAN.G27.56 Capsicum annuum HOM05D007593 ORTHO05D009686 5.1e-40 169.5 335 36.1
Eucgr.B03393 Eucalyptus grandis HOM05D007593 ORTHO05D009686 5.9e-36 156.0 130 60.8
Hund25291 Selenicereus undatus HOM05D007593 ORTHO05D009686 4.7e-33 146.4 109 73.4
BcaC05g24925 Brassica carinata HOM05D007593 ORTHO05D009686 4.1e-29 133.3 234 40.6
BcaC05g24887 Brassica carinata HOM05D007593 ORTHO05D009686 6.5e-27 125.9 306 35.0
Lalb_Chr05g0217431 Lupinus albus HOM05D007593 ORTHO05D009686 9.1e-21 105.5 111 56.8
DCAR_031078 Daucus carota HOM05D007593 ORTHO05D009686 2.7e-20 104.0 179 40.2
Sabra15G0067100 Salix brachista HOM05D007593 ORTHO05D009686 4.2e-18 96.7 73 75.3
Lalb_Chr05g0217441 Lupinus albus HOM05D007593 ORTHO05D009686 9.4e-18 95.5 128 44.5
TPR.G26746 Trifolium pratense HOM05D007593 ORTHO05D009686 8.0e-17 92.4 321 29.6
Zm00001eb223170 Zea mays HOM05D007593 ORTHO05D009686 5.7e-15 86.3 222 30.6
Sp1g09040 Schrenkiella parvula HOM05D007593 ORTHO05D009686 2.4e-13 80.9 64 68.8
AagrBONN_evm.TU.Sc2ySwM_228.4242 Anthoceros agrestis HOM05D007593 ORTHO05D009686 9.5e-10 68.9 167 26.9
CSS0023539 Camellia sinensis var. sinensis HOM05D007593 ORTHO05D009686 1.2e-09 68.6 118 41.5
Sc04g0008650 Simmondsia chinensis HOM05D007593 ORTHO05D009686 1.6e-09 68.2 160 36.2
arahy.Tifrunner.gnm1.ann1.YHM9KM Arachis hypogaea HOM05D007593 ORTHO05D009686 8.0e-09 65.9 59 64.4
TAR629G1825 Trochodendron aralioides HOM05D007593 ORTHO05D009686 1.0e-08 65.5 105 41.0
Peaxi162Scf00209g00948 Petunia axillaris HOM05D007593 ORTHO05D009686 1.4e-08 65.1 94 41.5
Ciclev10033560m.g Citrus clementina HOM05D007593 ORTHO05D009686 3.0e-08 63.9 90 44.4
MBI01_g46270_MAGBIO Magnolia biondii HOM05D007593 ORTHO05D009686 4.0e-08 63.5 147 29.9
SMO174G0259 Selaginella moellendorffii HOM05D003005 ORTHO05D021244 2.6e-07 60.8 286 22.0


User provided reference genes

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