Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G2733 Fragaria x ananassa HOM05D004096 ORTHO05D010213 2.0e-132 475.7 229 100.0
FAN14G2992 Fragaria x ananassa HOM05D004096 ORTHO05D010213 2.7e-121 438.7 219 96.8
FAN23G0656 Fragaria x ananassa HOM05D004096 ORTHO05D010213 1.7e-115 419.5 219 94.1
FAN13G2044 Fragaria x ananassa HOM05D004096 ORTHO05D010213 1.8e-88 329.7 229 69.4
FAN13G3102 Fragaria x ananassa HOM05D004096 ORTHO05D010213 1.1e-87 327.0 229 69.0
FAN18G1768 Fragaria x ananassa HOM05D004096 ORTHO05D010213 9.7e-87 323.9 212 72.2
FvH4_6g40680 Fragaria vesca HOM05D004096 ORTHO05D010213 3.7e-86 322.0 212 71.2
FAN28G1999 Fragaria x ananassa HOM05D004096 ORTHO05D010213 1.5e-84 316.6 248 63.7
FvH4_1g09630 Fragaria vesca HOM05D004096 ORTHO05D045665 2.7e-52 209.5 128 74.2
FvH4_2g25151 Fragaria vesca HOM05D004096 ORTHO05D010213 3.8e-51 205.7 226 46.5
FAN07G1624 Fragaria x ananassa HOM05D004096 ORTHO05D010213 8.6e-51 204.5 114 86.0
FAN17G0441 Fragaria x ananassa HOM05D004096 ORTHO05D010213 9.8e-47 191.0 225 44.4
FvH4_3g37244 Fragaria vesca HOM05D004096 ORTHO05D010213 3.7e-46 189.1 224 43.3
FvH4_2g09470 Fragaria vesca HOM05D004096 ORTHO05D010213 4.5e-44 182.2 199 44.2
FAN03G1232 Fragaria x ananassa HOM05D004096 ORTHO05D010213 2.5e-42 176.4 187 47.1
FvH4_6g40321 Fragaria vesca HOM05D004096 ORTHO05D010213 7.0e-37 158.3 169 47.9
RcHm_v2.0_Chr3g0478081 Rosa chinensis HOM05D004096 ORTHO05D000898 5.0e-35 152.1 227 37.0
FAN26G1477 Fragaria x ananassa HOM05D004096 ORTHO05D010213 4.3e-34 149.1 180 42.8
FvH4_4g07721 Fragaria vesca HOM05D004096 ORTHO05D010213 1.6e-33 147.1 173 43.4
FAN04G0203 Fragaria x ananassa HOM05D004096 ORTHO05D010213 2.3e-32 143.3 170 43.5
FAN25G0938 Fragaria x ananassa HOM05D004096 ORTHO05D010213 1.3e-30 137.5 226 35.8
FAN20G0479 Fragaria x ananassa HOM05D004096 ORTHO05D025475 2.9e-30 136.3 211 35.1
FAN17G2488 Fragaria x ananassa HOM05D004096 ORTHO05D010213 5.4e-29 132.1 175 40.0
FAN24G0214 Fragaria x ananassa HOM05D004096 ORTHO05D010213 7.8e-28 128.3 68 91.2
FAN17G0384 Fragaria x ananassa HOM05D004096 ORTHO05D010213 3.0e-27 126.3 80 72.5
FvH4_1g25481 Fragaria vesca HOM05D004096 ORTHO05D010213 6.6e-27 125.2 138 45.7
FvH4_4g03329 Fragaria vesca HOM05D004096 ORTHO05D010213 1.5e-26 124.0 134 46.3
FvH4_c19g00020 Fragaria vesca HOM05D004096 ORTHO05D010213 1.6e-25 120.6 127 46.5
FAN09G2456 Fragaria x ananassa HOM05D004096 ORTHO05D010213 2.1e-25 120.2 150 40.7
FAN13G2842 Fragaria x ananassa HOM05D009478 ORTHO05D010213 8.9e-24 114.8 155 38.1
RcHm_v2.0_Chr4g0396211 Rosa chinensis HOM05D009478 ORTHO05D010213 1.5e-23 114.0 155 38.7
FAN23G2567 Fragaria x ananassa HOM05D009478 ORTHO05D010213 7.6e-23 111.7 160 37.5
FAN20G1392 Fragaria x ananassa HOM05D004096 ORTHO05D010213 2.9e-22 109.8 185 36.8
FAN01G2101 Fragaria x ananassa HOM05D009478 ORTHO05D010213 3.7e-22 109.4 161 36.6
FAN05G1382 Fragaria x ananassa HOM05D004096 ORTHO05D000898 1.9e-21 107.1 223 33.6
FAN12G0255 Fragaria x ananassa HOM05D004096 ORTHO05D035535 9.2e-21 104.8 165 38.2
FvH4_4g09520 Fragaria vesca HOM05D004096 ORTHO05D035535 1.2e-20 104.4 211 33.2
FAN09G0146 Fragaria x ananassa HOM05D004096 ORTHO05D045665 1.6e-20 104.0 68 72.1
RcHm_v2.0_Chr3g0451001 Rosa chinensis HOM05D009478 ORTHO05D010213 2.1e-20 103.6 167 35.9
FAN16G2510 Fragaria x ananassa HOM05D004096 ORTHO05D010213 3.5e-20 102.8 208 32.7
FAN15G2942 Fragaria x ananassa HOM05D004096 ORTHO05D010213 6.6e-19 98.6 248 30.2
FAN23G1750 Fragaria x ananassa HOM05D004096 ORTHO05D035870 1.6e-17 94.0 52 84.6
FAN16G0476 Fragaria x ananassa HOM05D004096 ORTHO05D010213 2.1e-17 93.6 51 88.2
FAN12G1579 Fragaria x ananassa HOM05D004096 ORTHO05D035535 3.6e-17 92.8 106 47.2
FAN21G3088 Fragaria x ananassa HOM05D004096 ORTHO05D000898 4.7e-17 92.4 109 44.0
FAN09G4395 Fragaria x ananassa HOM05D004096 ORTHO05D025475 1.1e-16 91.3 129 34.9
FAN17G2761 Fragaria x ananassa HOM05D004096 ORTHO05D010213 5.2e-16 89.0 118 39.8
FAN16G3430 Fragaria x ananassa HOM05D004096 ORTHO05D010213 3.4e-15 86.3 97 44.3
FAN25G0749 Fragaria x ananassa HOM05D010969 ORTHO05D010213 2.2e-14 83.6 173 30.1
FvH4_7g31231 Fragaria vesca HOM05D017852 ORTHO05D010823 2.9e-14 83.2 162 33.3
RcHm_v2.0_Chr1g0366901 Rosa chinensis HOM05D004096 ORTHO05D010823 3.8e-14 82.8 173 30.1
FAN05G1903 Fragaria x ananassa HOM05D017852 ORTHO05D010823 4.9e-14 82.4 152 34.2
FAN24G2359 Fragaria x ananassa HOM05D004096 ORTHO05D000898 4.9e-14 82.4 213 29.1
FAN27G2266 Fragaria x ananassa HOM05D017852 ORTHO05D010823 1.4e-13 80.9 169 33.1
FAN09G4807 Fragaria x ananassa HOM05D004096 ORTHO05D029602 1.9e-13 80.5 175 33.1
FvH4_6g28332 Fragaria vesca HOM05D017852 ORTHO05D010823 3.2e-13 79.7 152 32.9
FAN16G1491 Fragaria x ananassa HOM05D004096 ORTHO05D010213 3.2e-13 79.7 66 54.5
FAN12G1875 Fragaria x ananassa HOM05D004096 ORTHO05D000898 1.6e-12 77.4 150 29.3
FAN16G0074 Fragaria x ananassa HOM05D007993 ORTHO05D000898 4.6e-12 75.9 168 27.4
FAN10G0034 Fragaria x ananassa HOM05D004096 ORTHO05D000898 6.0e-12 75.5 136 32.4
FAN16G2434 Fragaria x ananassa HOM05D004096 ORTHO05D000898 1.0e-11 74.7 165 32.1
FAN06G3212 Fragaria x ananassa HOM05D004096 ORTHO05D010823 1.3e-11 74.3 150 28.7
FAN27G1058 Fragaria x ananassa HOM05D004096 ORTHO05D010213 1.7e-11 73.9 99 36.4
FAN24G2093 Fragaria x ananassa HOM05D004096 ORTHO05D029602 2.3e-11 73.6 183 31.7
FAN18G3521 Fragaria x ananassa HOM05D011469 ORTHO05D014217 3.0e-11 73.2 164 31.7
FAN14G0071 Fragaria x ananassa HOM05D007993 ORTHO05D000898 3.3e-10 69.7 156 30.8
FAN13G0573 Fragaria x ananassa HOM05D011469 ORTHO05D014217 4.3e-10 69.3 164 31.1
FAN27G2741 Fragaria x ananassa HOM05D007993 ORTHO05D000898 4.3e-10 69.3 156 30.8
FAN28G1618 Fragaria x ananassa HOM05D007993 ORTHO05D000898 4.3e-10 69.3 156 30.8
FAN22G0991 Fragaria x ananassa HOM05D004096 ORTHO05D000898 5.6e-10 68.9 80 43.8
FAN25G0030 Fragaria x ananassa HOM05D004096 ORTHO05D000898 5.6e-10 68.9 80 43.8
FAN17G2532 Fragaria x ananassa HOM05D004096 ORTHO05D010213 9.6e-10 68.2 248 27.0
Prupe.5G238300 Prunus persica HOM05D004096 ORTHO05D000898 9.6e-10 68.2 152 30.9
FAN19G1351 Fragaria x ananassa HOM05D007993 ORTHO05D000898 1.3e-09 67.8 156 30.1
FvH4_7g10251 Fragaria vesca HOM05D004096 ORTHO05D029602 1.6e-09 67.4 134 36.6
FAN04G1460 Fragaria x ananassa HOM05D007993 ORTHO05D000898 1.6e-09 67.4 156 30.1
FAN24G1357 Fragaria x ananassa HOM05D004096 ORTHO05D012232 2.8e-09 66.6 185 29.7
FvH4_2g27931 Fragaria vesca HOM05D004096 ORTHO05D029602 3.6e-09 66.2 134 35.8
FAN08G1236 Fragaria x ananassa HOM05D007993 ORTHO05D000898 4.8e-09 65.9 142 31.7
FAN19G2687 Fragaria x ananassa HOM05D009478 ORTHO05D010213 6.2e-09 65.5 108 34.3
FAN28G0966 Fragaria x ananassa HOM05D007993 ORTHO05D000898 6.2e-09 65.5 147 28.6
FAN02G2983 Fragaria x ananassa HOM05D004096 ORTHO05D010213 8.1e-09 65.1 133 33.1
FAN03G2350 Fragaria x ananassa HOM05D007993 ORTHO05D000898 1.4e-08 64.3 150 30.7
FAN13G0415 Fragaria x ananassa HOM05D007993 ORTHO05D000898 2.4e-08 63.5 156 29.5
FAN25G2962 Fragaria x ananassa HOM05D004096 ORTHO05D010213 3.1e-08 63.2 75 37.3
FvH4_2g07612 Fragaria vesca HOM05D007993 ORTHO05D012371 4.0e-08 62.8 150 28.0
FAN05G5253 Fragaria x ananassa HOM05D010142 ORTHO05D012232 4.0e-08 62.8 149 28.2
FAN23G0071 Fragaria x ananassa HOM05D010142 ORTHO05D012232 4.0e-08 62.8 149 28.2
FvH4_6g25720 Fragaria vesca HOM05D009478 ORTHO05D010213 1.2e-07 61.2 120 31.7
FAN14G0448 Fragaria x ananassa HOM05D010142 ORTHO05D012232 1.2e-07 61.2 149 27.5
Prupe.3G127900 Prunus persica HOM05D066118 ORTHO05D050597 2.0e-07 60.5 62 43.5
Prupe.4G261000 Prunus persica HOM05D066118 ORTHO05D050597 2.0e-07 60.5 62 43.5
FAN02G3705 Fragaria x ananassa HOM05D010142 ORTHO05D012232 2.6e-07 60.1 136 29.4
Sabra17G0002000 Salix brachista HOM05D008396 ORTHO05D018844 2.6e-07 60.1 155 26.5
Sabra17G0014800 Salix brachista HOM05D008396 ORTHO05D009908 2.6e-07 60.1 155 26.5
FAN16G1984 Fragaria x ananassa HOM05D010142 ORTHO05D012232 4.4e-07 59.3 149 27.5
FvH4_5g33480 Fragaria vesca HOM05D004096 ORTHO05D046227 1.3e-06 57.8 73 41.1
FAN05G3432 Fragaria x ananassa HOM05D010142 ORTHO05D012232 1.3e-06 57.8 193 25.4
FAN25G3308 Fragaria x ananassa HOM05D010142 ORTHO05D012232 1.3e-06 57.8 193 25.4
FAN09G0089 Fragaria x ananassa HOM05D009478 ORTHO05D010213 2.2e-06 57.0 74 36.5
FAN05G1459 Fragaria x ananassa HOM05D010142 ORTHO05D012232 2.9e-06 56.6 166 26.5
Prupe.2G063700 Prunus persica HOM05D017852 ORTHO05D012232 3.8e-06 56.2 138 28.3
FAN01G2716 Fragaria x ananassa HOM05D009478 ORTHO05D010213 4.9e-06 55.8 63 38.1
FAN20G1793 Fragaria x ananassa HOM05D021144 ORTHO05D022601 4.9e-06 55.8 43 62.8
CANSAT56G2158 Cannabis sativa HOM05D009769 ORTHO05D010823 8.4e-06 55.1 145 25.5
FAN18G0249 Fragaria x ananassa HOM05D004096 ORTHO05D046227 8.4e-06 55.1 64 42.2


User provided reference genes

Program Settings