Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G2718 Fragaria x ananassa HOM05D006411 ORTHO05D202946 3.9e-27 124.0 61 100.0
FvH4_4g07260 Fragaria vesca HOM05D006411 ORTHO05D007563 2.0e-23 111.7 55 98.2
FvH4_4g26070 Fragaria vesca HOM05D000022 ORTHO05D000744 7.2e-13 76.6 59 67.8
FAN07G0515 Fragaria x ananassa HOM05D000022 ORTHO05D000744 7.2e-13 76.6 59 67.8
FAN12G4089 Fragaria x ananassa HOM05D000022 ORTHO05D000744 7.2e-13 76.6 59 67.8
RcHm_v2.0_Chr4g0433521 Rosa chinensis HOM05D000022 ORTHO05D000744 4.4e-10 67.4 59 59.3
Prupe.1G249300 Prunus persica HOM05D000022 ORTHO05D000744 1.7e-09 65.5 60 60.0
CiPaw.05G187400 Carya illinoinensis HOM05D000022 ORTHO05D000744 2.8e-09 64.7 58 53.4
Ciclev10030965m.g Citrus clementina HOM05D000022 ORTHO05D000744 3.1e-08 61.2 60 50.0
QL03p058874 Quercus lobata HOM05D000022 ORTHO05D000744 3.1e-08 61.2 56 53.6
CANSAT01G2992 Cannabis sativa HOM05D000022 ORTHO05D000744 5.3e-08 60.5 56 55.4
Ah.03g132890 Amaranthus hybridus HOM05D000022 ORTHO05D000744 1.5e-07 58.9 47 61.7
Thecc.02G255500 Theobroma cacao HOM05D000022 ORTHO05D000744 1.5e-07 58.9 56 53.6
CANSAT01G2025 Cannabis sativa HOM05D000022 ORTHO05D000744 4.5e-07 57.4 56 53.6
Dinv15260 Davidia involucrata HOM05D000022 ORTHO05D000744 4.5e-07 57.4 55 50.9
Lj6A809G49 Lonicera japonica HOM05D000022 ORTHO05D000744 4.5e-07 57.4 56 51.8
MD16G1097600 Malus domestica HOM05D000022 ORTHO05D000744 4.5e-07 57.4 51 56.9
DCAR_024451 Daucus carota HOM05D000022 ORTHO05D000744 5.9e-07 57.0 54 51.9
Eucgr.B03305 Eucalyptus grandis HOM05D000022 ORTHO05D000744 5.9e-07 57.0 55 52.7
QL03p058790 Quercus lobata HOM05D000022 ORTHO05D000744 7.7e-07 56.6 56 51.8
QL03p058818 Quercus lobata HOM05D000022 ORTHO05D000744 7.7e-07 56.6 56 51.8
QL03p058846 Quercus lobata HOM05D000022 ORTHO05D000744 7.7e-07 56.6 56 51.8
MD13G1096600 Malus domestica HOM05D000022 ORTHO05D000744 1.0e-06 56.2 51 54.9
TWI75G0442 Tripterygium wilfordii HOM05D000022 ORTHO05D000744 1.3e-06 55.8 59 45.8
Duzib251G0239 Durio zibethinus HOM05D000022 ORTHO05D000744 1.7e-06 55.5 56 51.8
Lj2g0011039 Lotus japonicus HOM05D000022 ORTHO05D000744 2.2e-06 55.1 59 44.1
Cfa009186 Carpinus fangiana HOM05D000022 ORTHO05D000744 2.9e-06 54.7 52 53.8
Gohir.A12G144200 Gossypium hirsutum HOM05D000022 ORTHO05D000744 2.9e-06 54.7 60 48.3
MD13G1096200 Malus domestica HOM05D000022 ORTHO05D000744 2.9e-06 54.7 30 76.7
arahy.Tifrunner.gnm1.ann1.YN6DAV Arachis hypogaea HOM05D000022 ORTHO05D000744 3.8e-06 54.3 55 47.3
Sed0011289 Sechium edule HOM05D000022 ORTHO05D000744 5.0e-06 53.9 60 48.3
Atru.chr11.2079 Acer truncatum HOM05D000022 ORTHO05D000744 8.5e-06 53.1 52 50.0


User provided reference genes

Program Settings