Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G2692 Fragaria x ananassa HOM05D002970 ORTHO05D009571 1.8e-165 585.9 305 100.0
FvH4_4g24960 Fragaria vesca HOM05D002970 ORTHO05D009571 1.4e-157 559.7 305 96.7
FAN12G3280 Fragaria x ananassa HOM05D002970 ORTHO05D009571 5.3e-157 557.8 305 96.7
RcHm_v2.0_Chr4g0432001 Rosa chinensis HOM05D002970 ORTHO05D009571 2.2e-139 499.2 299 88.0
Prupe.1G238700 Prunus persica HOM05D002970 ORTHO05D009571 1.4e-109 400.2 299 70.9
MD16G1107600 Malus domestica HOM05D002970 ORTHO05D009571 4.1e-109 398.7 292 73.6
GSVIVG01010294001 Vitis vinifera HOM05D002970 ORTHO05D009571 1.3e-91 340.5 300 60.7
QL03p055861 Quercus lobata HOM05D002970 ORTHO05D009571 1.6e-89 333.6 277 63.9
CiPaw.05G175600 Carya illinoinensis HOM05D002970 ORTHO05D009571 3.6e-89 332.4 290 63.1
CSS0013806 Camellia sinensis var. sinensis HOM05D002970 ORTHO05D009571 2.3e-88 329.7 308 59.7
Manes.12G018300 Manihot esculenta HOM05D002970 ORTHO05D009571 5.2e-88 328.6 281 63.3
Potri.008G181400 Populus trichocarpa HOM05D002970 ORTHO05D009571 7.6e-87 324.7 295 61.0
COL.COLO4_23553 Corchorus olitorius HOM05D002970 ORTHO05D007037 1.3e-86 323.9 290 59.3
CsaV3_2G025140 Cucumis sativus L. HOM05D002970 ORTHO05D009571 1.1e-85 320.9 297 59.9
CANSAT01G2975 Cannabis sativa HOM05D002970 ORTHO05D009571 1.9e-85 320.1 254 64.2
Ciclev10032228m.g Citrus clementina HOM05D002970 ORTHO05D009571 4.1e-85 318.9 256 66.4
MELO3C010711.2 Cucumis melo HOM05D002970 ORTHO05D009571 4.1e-85 318.9 301 58.5
Atru.chr11.2205 Acer truncatum HOM05D002970 ORTHO05D009571 5.4e-85 318.5 250 66.8
Duzib248G1026 Durio zibethinus HOM05D002970 ORTHO05D009571 1.6e-84 317.0 287 60.3
Thecc.02G269300 Theobroma cacao HOM05D002970 ORTHO05D009571 3.0e-83 312.8 295 56.6
Atru.BG.282.p Acer truncatum HOM05D002970 ORTHO05D009571 8.1e-81 304.7 200 75.0
Aqoxy5G03608 Aquilegia oxysepala HOM05D002970 ORTHO05D009571 8.9e-80 301.2 268 60.8
Gorai.009G334200 Gossypium raimondii HOM05D002970 ORTHO05D009571 1.7e-78 297.0 295 56.3
BcaC06g31093 Brassica carinata HOM05D002970 ORTHO05D009571 2.2e-78 296.6 259 62.2
Haze_12309 Corylus avellana HOM05D007119 ORTHO05D009220 2.9e-78 296.2 302 56.0
BolC7t44037H Brassica oleracea HOM05D007119 ORTHO05D009220 6.4e-78 295.0 257 61.9
C07p35060 Brassica napus HOM05D007119 ORTHO05D009220 8.4e-78 294.7 257 61.9
CARHR147070 Cardamine hirsuta HOM05D002970 ORTHO05D009571 8.4e-78 294.7 268 58.6
Sp2g15280 Schrenkiella parvula HOM05D002970 ORTHO05D009571 1.1e-77 294.3 257 58.4
BcaC06g31096 Brassica carinata HOM05D007119 ORTHO05D009220 1.4e-77 293.9 259 61.0
BcaC06g33929 Brassica carinata HOM05D002970 ORTHO05D009571 2.4e-77 293.1 253 62.1
MD13G1107700 Malus domestica HOM05D002970 ORTHO05D009571 3.2e-77 292.7 256 65.6
PGR102G3027 Punica granatum HOM05D002970 ORTHO05D009571 3.2e-77 292.7 262 62.2
Lalb_Chr07g0185611 Lupinus albus HOM05D002970 ORTHO05D009571 4.2e-77 292.4 244 63.5
Lj6C818G9 Lonicera japonica HOM05D002970 ORTHO05D009571 5.4e-77 292.0 272 59.2
AT3G26085 Arabidopsis thaliana HOM05D002970 ORTHO05D009571 7.1e-77 291.6 253 60.1
Carub.0005s0396 Capsella rubella HOM05D002970 ORTHO05D009571 9.3e-77 291.2 254 59.4
Ca_17805_v3 Cicer arietinum L. HOM05D002970 ORTHO05D009571 1.6e-76 290.4 244 63.5
ECA234G3025 Erigeron canadensis HOM05D002970 ORTHO05D009571 2.7e-76 289.7 265 57.7
Phvul.002G257900 Phaseolus vulgaris HOM05D002970 ORTHO05D009571 2.7e-76 289.7 260 58.8
A06p42260 Brassica napus HOM05D007119 ORTHO05D009220 3.5e-76 289.3 254 59.4
AL5G14780 Arabidopsis lyrata HOM05D002970 ORTHO05D009571 4.6e-76 288.9 255 60.4
BraA06t27142Z Brassica rapa HOM05D007119 ORTHO05D009220 6.0e-76 288.5 249 60.2
Thhalv10004665m.g Eutrema salsugineum HOM05D002970 ORTHO05D009571 6.0e-76 288.5 253 59.7
Medtr8g089550 Medicago truncatula HOM05D002970 ORTHO05D009571 1.3e-75 287.3 212 68.4
MBI11_g24187_MAGBIO Magnolia biondii HOM05D002970 ORTHO05D009571 2.3e-75 286.6 294 55.8
Eucgr.B03232 Eucalyptus grandis HOM05D002970 ORTHO05D009571 3.9e-75 285.8 297 53.2
Sabra08G0138400 Salix brachista HOM05D000799 ORTHO05D000629 3.9e-75 285.8 280 58.6
Sopen05g009220 Solanum pennellii HOM05D002970 ORTHO05D009571 1.5e-74 283.9 256 58.6
Peaxi162Scf00128g00724 Petunia axillaris HOM05D002970 ORTHO05D009571 1.9e-74 283.5 258 58.9
Gohir.A05G311600 Gossypium hirsutum HOM05D002970 ORTHO05D009571 3.3e-74 282.7 225 64.0
TPR.G6253 Trifolium pratense HOM05D002970 ORTHO05D009571 4.3e-74 282.3 240 61.7
HanXRQChr17g0569221 Helianthus annuus HOM05D002970 ORTHO05D009571 5.6e-74 282.0 258 59.3
Nitab4.5_0002688g0010 Nicotiana tabacum HOM05D002970 ORTHO05D009571 5.6e-74 282.0 259 59.5
EL10Ac6g15186 Beta vulgaris HOM05D002970 ORTHO05D009571 4.8e-73 278.9 265 60.8
CAN.G49.8 Capsicum annuum HOM05D002970 ORTHO05D009571 4.8e-73 278.9 299 53.8
Nitab4.5_0000041g0260 Nicotiana tabacum HOM05D002970 ORTHO05D009571 4.8e-73 278.9 257 59.1
Cc11_g16280 Coffea canephora HOM05D002970 ORTHO05D009571 1.1e-72 277.7 263 57.4
PGSC0003DMG400010736 Solanum tuberosum HOM05D002970 ORTHO05D009571 1.8e-72 276.9 269 57.2
vmacro16152 Vaccinium macrocarpon HOM05D002970 ORTHO05D009571 4.0e-72 275.8 324 50.9
PSO782G2321 Papaver somniferum HOM05D002970 ORTHO05D009571 6.9e-72 275.0 196 69.9
arahy.Tifrunner.gnm1.ann1.4Z4H5J Arachis hypogaea HOM05D002970 ORTHO05D009571 1.2e-71 274.2 227 62.6
Lsat_1_v5_gn_4_2440 Lactuca sativa HOM05D000799 ORTHO05D009571 1.5e-71 273.9 254 57.9
SalBow2G2585 Salvia bowleyana HOM05D002970 ORTHO05D009571 1.5e-71 273.9 213 65.7
arahy.Tifrunner.gnm1.ann1.C1FJC6 Arachis hypogaea HOM05D002970 ORTHO05D009571 5.8e-71 271.9 223 62.8
THA.LOC104825684 Tarenaya hassleriana HOM05D002970 ORTHO05D009571 8.4e-70 268.1 275 53.8
Psat7g060120 Pisum sativum HOM05D002970 ORTHO05D009571 2.4e-69 266.5 250 58.4
ATR0824G068 Amborella trichopoda HOM05D002970 ORTHO05D009571 8.7e-67 258.1 270 53.7
Hund25423 Selenicereus undatus HOM05D002970 ORTHO05D009571 1.1e-66 257.7 261 57.5
ClCG08G017480 Citrullus lanatus HOM05D002970 ORTHO05D009571 2.5e-66 256.5 329 48.0
TAR371G0312 Trochodendron aralioides HOM05D002970 ORTHO05D007037 2.5e-66 256.5 277 54.9
Zm00001eb406400 Zea mays HOM05D002970 ORTHO05D009571 2.8e-65 253.1 206 59.2
PSO063G2167 Papaver somniferum HOM05D002970 ORTHO05D009571 6.2e-65 251.9 251 55.4
Gohir.D05G312700 Gossypium hirsutum HOM05D002970 ORTHO05D009571 2.4e-64 250.0 291 50.5
CDE02G1212 Ceratophyllum demersum HOM05D002970 ORTHO05D009571 9.0e-64 248.1 262 50.4
AUR62005542 Chenopodium quinoa HOM05D002970 ORTHO05D009571 4.9e-62 242.3 265 54.0
HPP92_024537 Vanilla planifolia HOM05D002970 ORTHO05D009571 4.9e-62 242.3 268 48.1
Nn4g22479 Nelumbo nucifera HOM05D002970 ORTHO05D009571 1.1e-61 241.1 252 54.0
AUR62024190 Chenopodium quinoa HOM05D002970 ORTHO05D007037 1.6e-60 237.3 200 62.5
TWI36G0308 Tripterygium wilfordii HOM05D002970 ORTHO05D009571 2.1e-60 236.9 246 56.9
Migut.K00672 Erythranthe guttata HOM05D002970 ORTHO05D009571 2.3e-59 233.4 272 51.5
Lj4g0006456 Lotus japonicus HOM05D002970 ORTHO05D009571 5.1e-59 232.3 227 57.3
Aa31LG2G6280 Aethionema arabicum HOM05D002970 ORTHO05D009571 2.0e-55 220.3 262 49.6
Solyc05g014190.4 Solanum lycopersicum HOM05D002970 ORTHO05D009571 1.0e-54 218.0 207 56.5
Cpa.g.sc86.6 Carica papaya HOM05D002970 ORTHO05D009571 1.8e-51 207.2 357 40.1
unitig_749.g13282 Utricularia gibba HOM05D002970 ORTHO05D009571 4.3e-50 202.6 145 66.2
Mapoly0082s0035 Marchantia polymorpha HOM05D002970 ORTHO05D009571 4.6e-44 182.6 246 39.8
Pp3c24_16920 Physcomitrium patens HOM05D002970 ORTHO05D009571 1.0e-43 181.4 245 41.2
AagrBONN_evm.TU.Sc2ySwM_344.962 Anthoceros agrestis HOM05D002970 ORTHO05D009571 3.9e-43 179.5 317 37.2
SMO365G0071 Selaginella moellendorffii HOM05D002970 ORTHO05D009571 1.0e-38 164.9 239 42.7
Dinv14770 Davidia involucrata HOM05D002970 ORTHO05D009571 3.6e-36 156.4 192 50.5
Sed0000980 Sechium edule HOM05D002970 ORTHO05D009571 4.6e-36 156.0 214 48.1
CSS0042994 Camellia sinensis var. sinensis HOM05D002970 ORTHO05D009571 2.8e-33 146.7 97 73.2
Glyma.05G172100 Glycine max HOM05D002970 ORTHO05D009571 1.0e-30 138.3 142 56.3
MSTRG.542 Avicennia marina HOM05D002970 ORTHO05D009571 3.6e-28 129.8 206 44.2
DCAR_007026 Daucus carota HOM05D002970 ORTHO05D007037 6.7e-27 125.6 196 43.4
PRCOL_00001586 Prasinoderma coloniale HOM05D002970 ORTHO05D009571 7.4e-26 122.1 190 35.8
CBR_g20339 Chara braunii HOM05D002970 ORTHO05D009571 5.9e-23 112.5 172 37.8
Cre12.g556150 Chlamydomonas reinhardtii HOM05D002970 ORTHO05D009571 5.5e-21 105.9 203 31.5
MCO09G664 Micromonas commoda HOM05D002970 ORTHO05D009571 4.4e-18 96.3 117 39.3
arahy.Tifrunner.gnm1.ann1.WDY3XU Arachis hypogaea HOM05D002970 ORTHO05D009571 1.1e-16 91.7 133 47.4
SEGI_41532 Sequoiadendron giganteum HOM05D031330 ORTHO05D009571 1.8e-16 90.9 162 37.7
CiPaw.09G014900 Carya illinoinensis HOM05D002970 ORTHO05D009571 2.0e-15 87.4 120 50.0
CiPaw.11G163100 Carya illinoinensis HOM05D002970 ORTHO05D009571 2.0e-15 87.4 120 50.0
Glyma.06G231900 Glycine max HOM05D002970 ORTHO05D009571 3.5e-15 86.7 62 64.5
MBI11_g22623_MAGBIO Magnolia biondii HOM05D002970 ORTHO05D009571 2.2e-14 84.0 91 49.5


User provided reference genes

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