Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G2686 Fragaria x ananassa HOM05D000034 ORTHO05D000277 4.9e-85 317.8 161 100.0
FvH4_1g28531 Fragaria vesca HOM05D000034 ORTHO05D000277 4.3e-73 278.1 159 88.1
FvH4_4g08331 Fragaria vesca HOM05D000034 ORTHO05D000277 1.1e-71 273.5 159 88.7
RcHm_v2.0_Chr7g0205671 Rosa chinensis HOM05D001651 ORTHO05D000277 1.5e-57 226.5 156 75.0
FAN12G2533 Fragaria x ananassa HOM05D000034 ORTHO05D000277 2.1e-56 222.6 129 88.4
FAN19G2232 Fragaria x ananassa HOM05D000034 ORTHO05D000277 1.6e-35 153.3 84 86.9
FAN02G0208 Fragaria x ananassa HOM05D001651 ORTHO05D000277 1.8e-31 139.8 81 82.7
FAN02G1352 Fragaria x ananassa HOM05D001651 ORTHO05D000277 1.8e-31 139.8 81 82.7
Ah.08g221600 Amaranthus hybridus HOM05D000034 ORTHO05D000277 5.9e-14 81.6 175 28.6
GSVIVG01022336001 Vitis vinifera HOM05D000034 ORTHO05D000277 1.0e-13 80.9 166 31.9
FAN26G1288 Fragaria x ananassa HOM05D000034 ORTHO05D000277 6.1e-11 71.6 173 30.6
FvH4_1g18411 Fragaria vesca HOM05D000034 ORTHO05D000277 3.0e-10 69.3 158 30.4
RcHm_v2.0_Chr1g0343671 Rosa chinensis HOM05D000034 ORTHO05D000277 3.9e-10 68.9 168 30.4
EL10Ac3g05873 Beta vulgaris HOM05D000034 ORTHO05D000277 3.3e-09 65.9 180 30.6
RcHm_v2.0_Chr6g0284621 Rosa chinensis HOM05D000034 ORTHO05D000277 3.3e-09 65.9 171 30.4
EL10Ac7g17113 Beta vulgaris HOM05D000034 ORTHO05D000277 5.7e-09 65.1 176 26.7
FAN26G0104 Fragaria x ananassa HOM05D000034 ORTHO05D000277 5.7e-09 65.1 170 30.6
RcHm_v2.0_Chr5g0072391 Rosa chinensis HOM05D000034 ORTHO05D000277 5.7e-09 65.1 168 29.2
FAN14G3840 Fragaria x ananassa HOM05D000034 ORTHO05D000277 7.4e-09 64.7 173 30.1
RcHm_v2.0_Chr6g0274461 Rosa chinensis HOM05D000034 ORTHO05D000277 7.4e-09 64.7 171 29.8
FvH4_2g04031 Fragaria vesca HOM05D000034 ORTHO05D000277 2.8e-08 62.8 154 29.2
FAN09G1959 Fragaria x ananassa HOM05D016760 ORTHO05D029418 2.8e-08 62.8 172 32.0
EL10Ac1g00510 Beta vulgaris HOM05D000034 ORTHO05D000277 3.7e-08 62.4 176 26.1
FAN10G0151 Fragaria x ananassa HOM05D000034 ORTHO05D000277 6.3e-08 61.6 172 30.2
DCAR_007718 Daucus carota HOM05D000034 ORTHO05D000277 8.2e-08 61.2 158 24.7
FAN15G2888 Fragaria x ananassa HOM05D000034 ORTHO05D000277 8.2e-08 61.2 167 31.7
FAN25G0466 Fragaria x ananassa HOM05D000034 ORTHO05D000277 1.1e-07 60.8 158 29.1
DCAR_009785 Daucus carota HOM05D001651 ORTHO05D000277 1.8e-07 60.1 168 28.6
DCAR_015799 Daucus carota HOM05D001651 ORTHO05D000277 1.8e-07 60.1 168 28.6
FvH4_6g08194 Fragaria vesca HOM05D000034 ORTHO05D029418 1.8e-07 60.1 173 28.9
FAN12G3067 Fragaria x ananassa HOM05D000034 ORTHO05D000277 1.8e-07 60.1 161 29.2
FAN24G1441 Fragaria x ananassa HOM05D000034 ORTHO05D000277 2.4e-07 59.7 163 28.8
HanXRQChr10g0300111 Helianthus annuus HOM05D000034 ORTHO05D000277 2.4e-07 59.7 165 26.1
Hma1.2p1_1761F.1_g301340 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.4e-07 59.7 174 25.3
FvH4_7g00320 Fragaria vesca HOM05D000034 ORTHO05D000277 3.1e-07 59.3 161 29.2
Ciclev10006825m.g Citrus clementina HOM05D008011 ORTHO05D000277 4.1e-07 58.9 183 26.2
Atru.chr10.926 Acer truncatum HOM05D001651 ORTHO05D000277 5.3e-07 58.5 168 23.8
Ah.08g223780 Amaranthus hybridus HOM05D000034 ORTHO05D000277 5.3e-07 58.5 175 24.6
Lj3A351T4 Lonicera japonica HOM05D000034 ORTHO05D000277 5.3e-07 58.5 169 25.4
CANSAT01G2074 Cannabis sativa HOM05D000034 ORTHO05D000277 7.0e-07 58.2 172 26.2
Dinv36440 Davidia involucrata HOM05D012673 ORTHO05D000277 7.0e-07 58.2 179 26.3
Hma1.2p1_0189F.1_g082820 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 7.0e-07 58.2 174 24.7
Hma1.2p1_0890F.1_g233020 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 7.0e-07 58.2 175 25.1
Atru.chr2.3198 Acer truncatum HOM05D001651 ORTHO05D000277 1.2e-06 57.4 172 25.0
FvH4_1g22560 Fragaria vesca HOM05D000034 ORTHO05D000037 1.2e-06 57.4 156 26.9
FAN09G0335 Fragaria x ananassa HOM05D000034 ORTHO05D000277 1.6e-06 57.0 162 26.5
Atru.chr12.953 Acer truncatum HOM05D001651 ORTHO05D000277 2.0e-06 56.6 168 23.2
DCAR_018898 Daucus carota HOM05D001651 ORTHO05D000277 2.0e-06 56.6 168 26.8
Atru.chr6.616 Acer truncatum HOM05D000034 ORTHO05D000037 2.6e-06 56.2 177 24.9
Hma1.2p1_0026F.1_g016610 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.6e-06 56.2 174 24.1
RcHm_v2.0_Chr1g0373591 Rosa chinensis HOM05D000034 ORTHO05D000277 2.6e-06 56.2 155 25.2
ECA233G2530 Erigeron canadensis HOM05D004119 ORTHO05D004797 3.5e-06 55.8 147 28.6
FAN17G0070 Fragaria x ananassa HOM05D000034 ORTHO05D000277 3.5e-06 55.8 156 27.6
EL10Ac7g17645 Beta vulgaris HOM05D000034 ORTHO05D000037 4.5e-06 55.5 184 25.0
QL01p014514 Quercus lobata HOM05D000034 ORTHO05D000277 4.5e-06 55.5 170 27.6
Dinv06479 Davidia involucrata HOM05D000034 ORTHO05D000277 5.9e-06 55.1 168 26.2
FAN16G2781 Fragaria x ananassa HOM05D016760 ORTHO05D000277 5.9e-06 55.1 157 30.6
Ciclev10013729m.g Citrus clementina HOM05D008011 ORTHO05D000277 7.7e-06 54.7 179 23.5
FAN20G0414 Fragaria x ananassa HOM05D000034 ORTHO05D000277 7.7e-06 54.7 156 26.3


User provided reference genes

Program Settings