Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G2561 Fragaria x ananassa HOM05D005890 ORTHO05D006717 1.3e-197 693.0 383 100.0
FAN12G2329 Fragaria x ananassa HOM05D005890 ORTHO05D006717 3.5e-190 668.3 383 96.1
FAN07G1770 Fragaria x ananassa HOM05D005890 ORTHO05D006717 1.7e-189 666.0 383 96.9
FvH4_4g06950 Fragaria vesca HOM05D005890 ORTHO05D006717 1.8e-157 559.7 327 95.7
RcHm_v2.0_Chr4g0398981 Rosa chinensis HOM05D005890 ORTHO05D006717 8.8e-133 477.6 443 68.6
MD16G1246300 Malus domestica HOM05D005890 ORTHO05D006717 1.3e-91 340.9 463 51.8
Prupe.1G073000 Prunus persica HOM05D005890 ORTHO05D006717 1.4e-74 284.3 470 44.3
VMungo1215G0729 Vigna mungo HOM05D005890 ORTHO05D006717 5.6e-63 245.7 399 43.1
CANSAT01G0113 Cannabis sativa HOM05D005890 ORTHO05D006717 3.1e-61 240.0 422 46.9
QL07p048247 Quercus lobata HOM05D005890 ORTHO05D006717 6.4e-59 232.3 494 38.5
MD13G1240600 Malus domestica HOM05D005890 ORTHO05D006717 1.4e-58 231.1 442 42.8
Sed0014693 Sechium edule HOM05D005890 ORTHO05D006717 6.6e-56 222.2 433 42.5
Glyma.17G058000 Glycine max HOM05D005890 ORTHO05D006717 1.5e-55 221.1 370 43.2
MELO3C006422.2 Cucumis melo HOM05D005890 ORTHO05D006717 2.5e-55 220.3 425 42.6
Glyma.13G101600 Glycine max HOM05D005890 ORTHO05D006717 3.3e-55 219.9 393 44.0
Phvul.003G140452 Phaseolus vulgaris HOM05D005890 ORTHO05D006717 7.3e-55 218.8 400 40.5
Thecc.09G191500 Theobroma cacao HOM05D005890 ORTHO05D006717 7.3e-55 218.8 471 39.3
Dinv41195 Davidia involucrata HOM05D005890 ORTHO05D006717 1.6e-54 217.6 596 35.1
Cfa013466 Carpinus fangiana HOM05D005890 ORTHO05D006717 2.1e-54 217.2 484 39.5
ClCG06G013720 Citrullus lanatus HOM05D005890 ORTHO05D006717 4.8e-54 216.1 441 42.4
DCAR_018014 Daucus carota HOM05D005890 ORTHO05D006717 6.2e-54 215.7 433 39.3
Hma1.2p1_0235F.1_g098760 Hydrangea macrophylla HOM05D005890 ORTHO05D006717 3.1e-53 213.4 469 36.7
arahy.Tifrunner.gnm1.ann1.V3N0NP Arachis hypogaea HOM05D005890 ORTHO05D006717 6.9e-53 212.2 397 43.8
CiPaw.07G198700 Carya illinoinensis HOM05D005890 ORTHO05D006717 1.2e-52 211.5 414 44.7
arahy.Tifrunner.gnm1.ann1.CB00ZF Arachis hypogaea HOM05D005890 ORTHO05D006717 4.5e-52 209.5 390 43.8
CsaV3_3G012070 Cucumis sativus L. HOM05D005890 ORTHO05D006717 5.8e-52 209.1 427 40.7
Dinv25461 Davidia involucrata HOM05D005890 ORTHO05D006717 7.6e-52 208.8 549 33.7
Gorai.012G008900 Gossypium raimondii HOM05D005890 ORTHO05D006717 7.6e-52 208.8 437 41.4
Manes.06G017800 Manihot esculenta HOM05D005890 ORTHO05D006717 7.6e-52 208.8 481 36.6
Lj4g0027857 Lotus japonicus HOM05D005890 ORTHO05D006717 1.3e-51 208.0 423 39.0
HanXRQChr03g0065401 Helianthus annuus HOM05D005890 ORTHO05D006717 2.2e-51 207.2 411 39.2
Nitab4.5_0000028g0410 Nicotiana tabacum HOM05D005890 ORTHO05D006717 2.2e-51 207.2 385 41.3
Eucgr.C02214 Eucalyptus grandis HOM05D005890 ORTHO05D006717 2.9e-51 206.8 490 36.1
Medtr4g127160 Medicago truncatula HOM05D005890 ORTHO05D006717 6.4e-51 205.7 403 40.4
Potri.018G140200 Populus trichocarpa HOM05D005890 ORTHO05D006717 1.4e-50 204.5 472 37.1
Duzib170G1164 Durio zibethinus HOM05D005890 ORTHO05D006717 7.1e-50 202.2 519 35.8
Potri.006G073100 Populus trichocarpa HOM05D005890 ORTHO05D006717 7.1e-50 202.2 495 36.2
Peaxi162Scf00046g00417 Petunia axillaris HOM05D005890 ORTHO05D006717 9.3e-50 201.8 404 40.8
Atru.BG.17.p Acer truncatum HOM05D005890 ORTHO05D006717 2.7e-49 200.3 377 41.1
Sp6g18850 Schrenkiella parvula HOM05D005890 ORTHO05D006717 1.0e-48 198.4 387 42.9
GSVIVG01029286001 Vitis vinifera HOM05D005890 ORTHO05D006717 1.0e-48 198.4 457 37.0
unitig_8.g3553 Utricularia gibba HOM05D005890 ORTHO05D006717 1.3e-48 198.0 417 38.8
PGSC0003DMG400019897 Solanum tuberosum HOM05D005890 ORTHO05D006717 1.7e-48 197.6 415 41.2
TWI32G1283 Tripterygium wilfordii HOM05D005890 ORTHO05D006717 6.6e-48 195.7 485 36.7
Gohir.A05G408300 Gossypium hirsutum HOM05D005890 ORTHO05D006717 1.1e-47 194.9 437 40.0
Cc03_g15250 Coffea canephora HOM05D005890 ORTHO05D006717 1.9e-47 194.1 485 35.9
Migut.L01872 Erythranthe guttata HOM05D005890 ORTHO05D006717 3.3e-47 193.4 383 39.2
Actinidia02494 Actinidia chinensis HOM05D005890 ORTHO05D006717 9.6e-47 191.8 488 36.5
Sabra06G0054500 Salix brachista HOM05D005890 ORTHO05D006717 2.1e-46 190.7 469 34.3
Ciclev10008727m.g Citrus clementina HOM05D005890 ORTHO05D006717 2.8e-46 190.3 343 43.7
Nitab4.5_0004916g0020 Nicotiana tabacum HOM05D005890 ORTHO05D006717 4.8e-46 189.5 398 39.2
PGR044G2166 Punica granatum HOM05D005890 ORTHO05D006717 8.1e-46 188.7 469 35.4
SGA_v2.0_scaffold41G15805 Striga asiatica HOM05D005890 ORTHO05D006717 1.1e-45 188.3 478 37.0
MSTRG.26556 Avicennia marina HOM05D005890 ORTHO05D006717 4.0e-45 186.4 468 35.0
Thhalv10013871m.g Eutrema salsugineum HOM05D005890 ORTHO05D006717 1.5e-44 184.5 399 38.6
Lalb_Chr13g0299851 Lupinus albus HOM05D005890 ORTHO05D006717 2.0e-44 184.1 391 41.2
HanXRQChr10g0308981 Helianthus annuus HOM05D005890 ORTHO05D006717 2.6e-44 183.7 344 42.2
Sopen07g004220 Solanum pennellii HOM05D005890 ORTHO05D006717 3.4e-44 183.3 395 40.5
CAN.G403.1 Capsicum annuum HOM05D005890 ORTHO05D006717 7.6e-44 182.2 402 39.3
Solyc07g008330.3 Solanum lycopersicum HOM05D005890 ORTHO05D006717 2.9e-43 180.3 393 40.2
Atru.chr7.926 Acer truncatum HOM05D005890 ORTHO05D006717 4.9e-43 179.5 185 57.3
Rhsim01G0114500 Rhododendron simsii HOM05D005890 ORTHO05D006717 8.4e-43 178.7 507 33.5
Lsat_1_v5_gn_7_55781 Lactuca sativa HOM05D005890 ORTHO05D006717 5.5e-42 176.0 455 34.9
PSO063G0609 Papaver somniferum HOM05D005890 ORTHO05D006717 7.1e-42 175.6 389 39.8
AUR62031274 Chenopodium quinoa HOM05D005890 ORTHO05D006717 1.2e-41 174.9 389 38.3
TWI34G1560 Tripterygium wilfordii HOM05D005890 ORTHO05D006717 1.6e-41 174.5 414 38.6
CSS0049336 Camellia sinensis var. sinensis HOM05D005890 ORTHO05D006717 2.1e-41 174.1 472 36.7
Sed0024384 Sechium edule HOM05D005890 ORTHO05D006717 2.1e-41 174.1 389 38.8
Hund24378 Selenicereus undatus HOM05D005890 ORTHO05D006717 2.1e-41 174.1 450 36.0
AUR62027422 Chenopodium quinoa HOM05D005890 ORTHO05D006717 1.0e-40 171.8 417 37.9
Aa31LG3G13020 Aethionema arabicum HOM05D005890 ORTHO05D006717 5.1e-40 169.5 404 38.1
ECA240G0208 Erigeron canadensis HOM05D005890 ORTHO05D006717 8.7e-40 168.7 504 31.7
Lsat_1_v5_gn_5_83860 Lactuca sativa HOM05D005890 ORTHO05D006717 8.7e-40 168.7 345 37.7
Aqoxy7G02888 Aquilegia oxysepala HOM05D005890 ORTHO05D006717 1.1e-39 168.3 379 38.0
THA.LOC104817770 Tarenaya hassleriana HOM05D005890 ORTHO05D006717 2.5e-39 167.2 408 38.0
Oeu063100.1 Olea europaea HOM05D005890 ORTHO05D006717 4.3e-39 166.4 146 62.3
Ah.14g085350 Amaranthus hybridus HOM05D005890 ORTHO05D006717 9.6e-39 165.2 387 39.0
CARHR270890 Cardamine hirsuta HOM05D005890 ORTHO05D006717 4.8e-38 162.9 383 38.4
Nn8g40670 Nelumbo nucifera HOM05D005890 ORTHO05D006717 1.1e-37 161.8 323 41.5
Ca_21262_v3 Cicer arietinum L. HOM05D005890 ORTHO05D006717 1.4e-37 161.4 373 37.8
COL.COLO4_08570 Corchorus olitorius HOM05D005890 ORTHO05D006717 1.4e-37 161.4 567 30.2
EL10Ac8g19296 Beta vulgaris HOM05D005890 ORTHO05D006717 3.1e-37 160.2 442 34.8
CDE02G0471 Ceratophyllum demersum HOM05D005890 ORTHO05D006717 4.0e-37 159.8 421 34.4
THA.LOC104813501 Tarenaya hassleriana HOM05D005890 ORTHO05D006717 4.0e-37 159.8 395 37.5
BcaB05g22318 Brassica carinata HOM05D005890 ORTHO05D006717 6.9e-37 159.1 390 39.0
ECA234G0353 Erigeron canadensis HOM05D005890 ORTHO05D006717 6.9e-37 159.1 375 38.1
SGA_v2.0_scaffold392G50652 Striga asiatica HOM05D005890 ORTHO05D006717 6.9e-37 159.1 339 39.2
TAR637G0001 Trochodendron aralioides HOM05D005890 ORTHO05D006717 2.6e-36 157.1 87 82.8
ATR1098G092 Amborella trichopoda HOM05D005890 ORTHO05D006717 3.4e-36 156.8 292 41.8
PSO170G0082 Papaver somniferum HOM05D005890 ORTHO05D006717 1.3e-35 154.8 371 38.5
TPR.G5393 Trifolium pratense HOM05D005890 ORTHO05D006717 1.7e-35 154.5 416 34.4
CDE05G3513 Ceratophyllum demersum HOM05D005890 ORTHO05D006717 5.5e-34 149.4 381 36.0
BcaC04g20011 Brassica carinata HOM05D005890 ORTHO05D006717 7.1e-34 149.1 350 38.6
BolC9t57729H Brassica oleracea HOM05D005890 ORTHO05D006717 9.3e-34 148.7 350 34.6
MBI18_g10586_MAGBIO Magnolia biondii HOM05D005890 ORTHO05D006717 9.3e-34 148.7 521 30.7
BraA02t05941Z Brassica rapa HOM05D005890 ORTHO05D006717 2.1e-33 147.5 398 37.4
A02p08710 Brassica napus HOM05D005890 ORTHO05D006717 2.7e-33 147.1 394 37.8
C09p48820 Brassica napus HOM05D005890 ORTHO05D006717 3.5e-33 146.7 350 34.3
BcaC03g14182 Brassica carinata HOM05D005890 ORTHO05D006717 7.9e-33 145.6 390 38.2
C02p14590 Brassica napus HOM05D005890 ORTHO05D006717 7.9e-33 145.6 390 38.2
BolC2t07586H Brassica oleracea HOM05D005890 ORTHO05D006717 7.9e-33 145.6 390 38.2
Os12g0613500 Oryza sativa ssp. japonica HOM05D005890 ORTHO05D006717 7.9e-33 145.6 403 35.5
vmacro20806 Vaccinium macrocarpon HOM05D005890 ORTHO05D006717 1.8e-32 144.4 583 30.7
Zm00001eb136110 Zea mays HOM05D005890 ORTHO05D006717 2.3e-32 144.1 208 45.2
HPP92_018699 Vanilla planifolia HOM05D005890 ORTHO05D006717 5.1e-32 142.9 452 33.0
SEGI_20539 Sequoiadendron giganteum HOM05D005890 ORTHO05D006717 8.7e-32 142.1 175 52.6
BcaB08g36002 Brassica carinata HOM05D005890 ORTHO05D006717 2.1e-30 137.5 352 37.2
Psat4g014480 Pisum sativum HOM05D005890 ORTHO05D006717 2.8e-30 137.1 143 56.6
MBI14_g15782_MAGBIO Magnolia biondii HOM05D005890 ORTHO05D006717 1.2e-28 131.7 244 40.6
Zm00001eb172010 Zea mays HOM05D005890 ORTHO05D006717 2.1e-25 120.9 85 65.9
Pp3c3_34440 Physcomitrium patens HOM05D005890 ORTHO05D006717 1.0e-24 118.6 193 43.0
Pp3c3_34441 Physcomitrium patens HOM05D005890 ORTHO05D006717 1.0e-24 118.6 193 43.0
AT5G57120 Arabidopsis thaliana HOM05D005890 ORTHO05D006717 3.0e-24 117.1 348 37.1
Mapoly0009s0141 Marchantia polymorpha HOM05D005890 ORTHO05D006717 3.0e-24 117.1 140 48.6
Cpa.g.sc115.65 Carica papaya HOM05D005890 ORTHO05D006717 6.7e-24 115.9 390 30.3
AagrBONN_evm.TU.Sc2ySwM_368.973 Anthoceros agrestis HOM05D005890 ORTHO05D006717 1.1e-21 108.6 182 41.2
CBR_g20282 Chara braunii HOM05D000019 ORTHO05D000002 1.4e-21 108.2 76 65.8
Gohir.D04G007200 Gossypium hirsutum HOM05D005890 ORTHO05D006717 1.4e-21 108.2 375 32.8
SEGI_22268 Sequoiadendron giganteum HOM05D005890 ORTHO05D006717 2.6e-20 104.0 62 77.4
AL8G33040 Arabidopsis lyrata HOM05D005890 ORTHO05D006717 1.7e-19 101.3 348 35.1
Carub.0008s1762 Capsella rubella HOM05D005890 ORTHO05D006717 5.5e-18 96.3 348 32.5
Sabra18G0114500 Salix brachista HOM05D005890 ORTHO05D006717 4.6e-17 93.2 411 30.2
CSS0049604 Camellia sinensis var. sinensis HOM05D005890 ORTHO05D006717 8.8e-16 89.0 478 29.7
DCAR_029041 Daucus carota HOM05D005890 ORTHO05D006717 1.1e-15 88.6 231 38.5
Haze_22044 Corylus avellana HOM05D005890 ORTHO05D006717 1.7e-14 84.7 223 35.0
SMO337G0105 Selaginella moellendorffii HOM05D004944 ORTHO05D005989 3.7e-14 83.6 295 35.3
Cre01.g055400 Chlamydomonas reinhardtii HOM05D005890 ORTHO05D006717 3.1e-13 80.5 95 52.6
CiPaw.08G031700 Carya illinoinensis HOM05D005890 ORTHO05D006717 2.6e-12 77.4 480 27.1
Cpa.g.c33129.1 Carica papaya HOM05D005890 ORTHO05D006717 7.7e-12 75.9 138 40.6
Zm00001eb394450 Zea mays HOM05D014690 ORTHO05D006717 1.3e-11 75.1 55 65.5
MCO09G065 Micromonas commoda HOM05D005890 ORTHO05D006717 1.2e-09 68.6 80 53.8
A10p14440 Brassica napus HOM05D005890 ORTHO05D006717 1.1e-07 62.0 34 79.4
BraA10t43535Z Brassica rapa HOM05D005890 ORTHO05D006717 1.1e-07 62.0 34 79.4
DCAR_001127 Daucus carota HOM05D000703 ORTHO05D006717 2.6e-07 60.8 134 42.5


User provided reference genes

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