Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G2550 Fragaria x ananassa HOM05D004366 ORTHO05D005058 4.2e-110 401.4 203 100.0
FAN12G0862 Fragaria x ananassa HOM05D004366 ORTHO05D005058 3.4e-107 391.7 203 98.0
FvH4_4g31510 Fragaria vesca HOM05D004366 ORTHO05D005058 7.5e-107 390.6 203 97.5
FAN15G0746 Fragaria x ananassa HOM05D004366 ORTHO05D005058 1.6e-101 372.9 203 93.6
FAN24G0452 Fragaria x ananassa HOM05D004366 ORTHO05D005058 4.7e-101 371.3 203 92.1
FAN27G2895 Fragaria x ananassa HOM05D004366 ORTHO05D005058 4.0e-100 368.2 204 92.6
FvH4_2g13310 Fragaria vesca HOM05D004366 ORTHO05D005058 9.8e-99 363.6 204 91.2
RcHm_v2.0_Chr4g0440001 Rosa chinensis HOM05D004366 ORTHO05D005058 1.3e-98 363.2 203 89.7
MD13G1073400 Malus domestica HOM05D004366 ORTHO05D005058 3.2e-89 332.0 200 80.5
Prupe.1G272700 Prunus persica HOM05D004366 ORTHO05D005058 3.2e-89 332.0 200 81.5
Manes.01G186800 Manihot esculenta HOM05D004366 ORTHO05D005058 4.3e-86 321.6 200 80.0
MD16G1074700 Malus domestica HOM05D004366 ORTHO05D005058 5.6e-86 321.2 200 79.0
QL03p064520 Quercus lobata HOM05D004366 ORTHO05D005058 1.2e-85 320.1 200 78.5
Atru.chr11.1817 Acer truncatum HOM05D004366 ORTHO05D005058 8.9e-84 313.9 199 77.9
Actinidia31203 Actinidia chinensis HOM05D004366 ORTHO05D005058 3.4e-83 312.0 200 78.0
Eucgr.B03429 Eucalyptus grandis HOM05D004366 ORTHO05D005058 1.3e-82 310.1 199 77.9
Peaxi162Scf00026g03112 Petunia axillaris HOM05D004366 ORTHO05D005058 1.7e-82 309.7 200 77.0
MELO3C012087.2 Cucumis melo HOM05D004366 ORTHO05D005058 2.9e-82 308.9 200 76.5
ClCG05G024360 Citrullus lanatus HOM05D004366 ORTHO05D005058 3.7e-82 308.5 193 79.3
Rhsim12G0062000 Rhododendron simsii HOM05D004366 ORTHO05D005058 6.4e-82 307.8 200 76.0
TWI12G0004 Tripterygium wilfordii HOM05D004366 ORTHO05D005058 6.4e-82 307.8 200 76.5
Thecc.02G350500 Theobroma cacao HOM05D004366 ORTHO05D005058 8.3e-82 307.4 198 77.3
Cpa.g.sc128.8 Carica papaya HOM05D004366 ORTHO05D005058 1.1e-81 307.0 200 76.5
CiPaw.06G083500 Carya illinoinensis HOM05D004366 ORTHO05D005058 1.1e-81 307.0 200 76.5
Ciclev10032771m.g Citrus clementina HOM05D004366 ORTHO05D005058 1.4e-81 306.6 199 76.4
CSS0003416 Camellia sinensis var. sinensis HOM05D004366 ORTHO05D005058 3.2e-81 305.4 200 77.0
CsaV3_5G032600 Cucumis sativus L. HOM05D004366 ORTHO05D005058 4.1e-81 305.1 200 76.5
Sed0027317 Sechium edule HOM05D004366 ORTHO05D005058 3.5e-80 302.0 200 73.5
CSS0021388 Camellia sinensis var. sinensis HOM05D004366 ORTHO05D005058 4.6e-80 301.6 200 76.0
CAN.G473.145 Capsicum annuum HOM05D004366 ORTHO05D005058 4.6e-80 301.6 200 75.5
Sc11g0001840 Simmondsia chinensis HOM05D004366 ORTHO05D005058 4.6e-80 301.6 200 74.5
Thhalv10019150m.g Eutrema salsugineum HOM05D004366 ORTHO05D005058 6.0e-80 301.2 200 75.5
AL2G28850 Arabidopsis lyrata HOM05D004366 ORTHO05D005058 1.7e-79 299.7 200 74.5
Gorai.013G084600 Gossypium raimondii HOM05D004366 ORTHO05D005058 2.3e-79 299.3 198 73.7
AT1G69680 Arabidopsis thaliana HOM05D004366 ORTHO05D005058 3.0e-79 298.9 200 74.0
Gohir.D13G074000 Gossypium hirsutum HOM05D004366 ORTHO05D005058 3.9e-79 298.5 198 73.7
THA.LOC104822115 Tarenaya hassleriana HOM05D004366 ORTHO05D005058 3.9e-79 298.5 200 75.0
Carub.0002s1634 Capsella rubella HOM05D004366 ORTHO05D005058 6.6e-79 297.7 200 74.5
Sp5g24810 Schrenkiella parvula HOM05D004366 ORTHO05D005058 6.6e-79 297.7 200 73.0
Glyma.01G045700 Glycine max HOM05D004366 ORTHO05D005058 8.6e-79 297.4 198 73.7
CARHR062670 Cardamine hirsuta HOM05D004366 ORTHO05D005058 1.5e-78 296.6 200 73.5
Cc11_g13140 Coffea canephora HOM05D004366 ORTHO05D005058 1.5e-78 296.6 200 72.5
Gohir.A13G073900 Gossypium hirsutum HOM05D004366 ORTHO05D005058 1.9e-78 296.2 198 73.2
Lj3C1038T15 Lonicera japonica HOM05D004366 ORTHO05D005058 1.9e-78 296.2 200 72.5
Aa31LG4G11100 Aethionema arabicum HOM05D004366 ORTHO05D005058 2.5e-78 295.8 200 73.0
A07p36060 Brassica napus HOM05D004366 ORTHO05D005058 2.5e-78 295.8 200 71.5
BraA07t31186Z Brassica rapa HOM05D004366 ORTHO05D005058 2.5e-78 295.8 200 71.5
Medtr8g463620 Medicago truncatula HOM05D004366 ORTHO05D005058 2.5e-78 295.8 198 73.7
Solyc01g010810.4 Solanum lycopersicum HOM05D004366 ORTHO05D005058 3.3e-78 295.4 200 73.0
A07p31430 Brassica napus HOM05D004366 ORTHO05D005058 5.6e-78 294.7 193 75.1
BraA07t30778Z Brassica rapa HOM05D004366 ORTHO05D005058 5.6e-78 294.7 193 75.1
FAN22G2022 Fragaria x ananassa HOM05D004366 ORTHO05D005058 5.6e-78 294.7 238 70.6
Glyma.02G106000 Glycine max HOM05D004366 ORTHO05D005058 7.3e-78 294.3 198 72.7
Sopen01g006640 Solanum pennellii HOM05D004366 ORTHO05D005058 7.3e-78 294.3 200 72.5
Lsat_1_v5_gn_8_52741 Lactuca sativa HOM05D004366 ORTHO05D005058 1.2e-77 293.5 197 72.1
Nitab4.5_0000141g0240 Nicotiana tabacum HOM05D004366 ORTHO05D005058 1.6e-77 293.1 200 72.5
BcaC08g46415 Brassica carinata HOM05D004366 ORTHO05D005058 2.1e-77 292.7 200 71.0
BolC6t39421H Brassica oleracea HOM05D004366 ORTHO05D005058 2.1e-77 292.7 200 71.0
Ca_04775_v3 Cicer arietinum L. HOM05D004366 ORTHO05D005058 2.1e-77 292.7 198 72.7
C06p36720 Brassica napus HOM05D004366 ORTHO05D005058 2.8e-77 292.4 193 74.6
SalBow2G0488 Salvia bowleyana HOM05D004366 ORTHO05D005058 2.8e-77 292.4 200 72.5
Medtr5g039690 Medicago truncatula HOM05D004366 ORTHO05D005058 3.6e-77 292.0 198 72.7
BolC6t38782H Brassica oleracea HOM05D004366 ORTHO05D005058 4.7e-77 291.6 193 74.1
COL.COLO4_22987 Corchorus olitorius HOM05D004366 ORTHO05D005058 4.7e-77 291.6 198 73.7
BcaB03g14744 Brassica carinata HOM05D004366 ORTHO05D005058 6.2e-77 291.2 200 71.0
C06p43460 Brassica napus HOM05D004366 ORTHO05D005058 8.1e-77 290.8 200 70.5
Lj2g0005379 Lotus japonicus HOM05D004366 ORTHO05D005058 1.1e-76 290.4 191 75.4
Lalb_Chr04g0256161 Lupinus albus HOM05D004366 ORTHO05D005058 1.8e-76 289.7 198 72.7
Migut.L01306 Erythranthe guttata HOM05D004366 ORTHO05D005058 3.1e-76 288.9 200 72.0
Hund05888 Selenicereus undatus HOM05D004366 ORTHO05D005058 3.1e-76 288.9 198 73.2
Nn4g23131 Nelumbo nucifera HOM05D004366 ORTHO05D005058 6.8e-76 287.7 194 75.8
Haze_12025 Corylus avellana HOM05D004366 ORTHO05D005058 2.0e-75 286.2 200 73.5
EL10Ac6g13190 Beta vulgaris HOM05D004366 ORTHO05D005058 2.6e-75 285.8 200 69.5
BcaB03g15490 Brassica carinata HOM05D004366 ORTHO05D005058 2.6e-75 285.8 194 73.2
CSS0022805 Camellia sinensis var. sinensis HOM05D004366 ORTHO05D005058 2.6e-75 285.8 199 74.4
Psat0s2341g0040 Pisum sativum HOM05D004366 ORTHO05D005058 4.4e-75 285.0 191 74.3
Sabra13G0046200 Salix brachista HOM05D004366 ORTHO05D005058 4.4e-75 285.0 200 70.0
PGSC0003DMG400006558 Solanum tuberosum HOM05D004366 ORTHO05D005058 4.4e-75 285.0 200 70.5
Sp3g28750 Schrenkiella parvula HOM05D004366 ORTHO05D005058 5.8e-75 284.6 203 70.0
MBI02_g23682_MAGBIO Magnolia biondii HOM05D004366 ORTHO05D005058 9.8e-75 283.9 194 73.7
Aqoxy3G03355 Aquilegia oxysepala HOM05D004366 ORTHO05D005058 1.3e-74 283.5 194 71.6
TWI53G1314 Tripterygium wilfordii HOM05D004366 ORTHO05D005058 1.7e-74 283.1 198 73.2
arahy.Tifrunner.gnm1.ann1.5V6A51 Arachis hypogaea HOM05D004366 ORTHO05D005058 2.2e-74 282.7 210 68.6
HanXRQChr08g0210471 Helianthus annuus HOM05D004366 ORTHO05D005058 2.9e-74 282.3 197 69.0
Phvul.002G086500 Phaseolus vulgaris HOM05D004366 ORTHO05D005058 3.7e-74 282.0 198 70.2
HanXRQChr12g0362541 Helianthus annuus HOM05D004366 ORTHO05D005058 6.4e-74 281.2 197 68.5
SGA_v2.0_scaffold20G09275 Striga asiatica HOM05D004366 ORTHO05D005058 6.4e-74 281.2 200 70.0
PSO339G1196 Papaver somniferum HOM05D004366 ORTHO05D005058 1.9e-73 279.6 193 72.5
PSO384G0235 Papaver somniferum HOM05D004366 ORTHO05D005058 1.9e-73 279.6 193 72.5
AUR62026617 Chenopodium quinoa HOM05D004366 ORTHO05D005058 2.4e-73 279.3 200 71.0
ATR0564G205 Amborella trichopoda HOM05D004366 ORTHO05D005058 3.2e-73 278.9 198 71.7
AUR62034912 Chenopodium quinoa HOM05D004366 ORTHO05D005058 9.2e-73 277.3 182 75.3
ECA233G4070 Erigeron canadensis HOM05D004366 ORTHO05D005058 1.3e-71 273.5 197 67.5
AUR62005764 Chenopodium quinoa HOM05D004366 ORTHO05D005058 2.3e-71 272.7 181 75.1
unitig_22.g6909 Utricularia gibba HOM05D004366 ORTHO05D005058 2.3e-71 272.7 200 69.5
Aa31sc15G10 Aethionema arabicum HOM05D004366 ORTHO05D005058 1.5e-70 270.0 177 76.3
PSO675G4203 Papaver somniferum HOM05D004366 ORTHO05D005058 1.5e-70 270.0 193 70.5
Zm00001eb080830 Zea mays HOM05D004366 ORTHO05D005058 2.5e-70 269.2 203 66.0
Oeu028302.2 Olea europaea HOM05D004366 ORTHO05D005058 3.3e-70 268.9 204 69.1
CANSAT25G1390 Cannabis sativa HOM05D004366 ORTHO05D005058 4.3e-70 268.5 200 67.5
Os04g0459600 Oryza sativa ssp. japonica HOM05D004366 ORTHO05D005058 1.2e-69 266.9 198 66.7
AL7G43580 Arabidopsis lyrata HOM05D004366 ORTHO05D005058 1.6e-69 266.5 184 72.8
BcaC08g45875 Brassica carinata HOM05D004366 ORTHO05D005058 6.2e-69 264.6 196 68.9
CANSAT54G1616 Cannabis sativa HOM05D004366 ORTHO05D005058 6.2e-69 264.6 200 66.5
Nitab4.5_0005950g0010 Nicotiana tabacum HOM05D004366 ORTHO05D005058 1.8e-68 263.1 200 67.5
PGR102G1003 Punica granatum HOM05D004366 ORTHO05D005058 5.2e-68 261.5 198 66.2
Potri.013G049900 Populus trichocarpa HOM05D004366 ORTHO05D005058 2.0e-67 259.6 181 72.4
arahy.Tifrunner.gnm1.ann1.QXP3RB Arachis hypogaea HOM05D004366 ORTHO05D005058 4.4e-67 258.5 175 72.0
AUR62028793 Chenopodium quinoa HOM05D004366 ORTHO05D005058 9.9e-67 257.3 200 66.5
VMungo1215G0984 Vigna mungo HOM05D004366 ORTHO05D005058 7.1e-65 251.1 179 70.4
Hma1.2p1_0598F.1_g186660 Hydrangea macrophylla HOM05D004366 ORTHO05D005058 1.6e-64 250.0 329 45.9
Oeu013622.3 Olea europaea HOM05D004366 ORTHO05D005058 6.0e-64 248.1 195 67.2
HPP92_006020 Vanilla planifolia HOM05D004366 ORTHO05D005058 7.8e-64 247.7 185 65.4
Aa31LG9G5650 Aethionema arabicum HOM05D004366 ORTHO05D005058 1.7e-63 246.5 220 60.9
Duzib248G1524 Durio zibethinus HOM05D004366 ORTHO05D005058 1.7e-63 246.5 199 63.8
SEGI_03925 Sequoiadendron giganteum HOM05D004366 ORTHO05D005058 5.1e-63 245.0 193 61.7
Ah.03g135200 Amaranthus hybridus HOM05D004366 ORTHO05D005058 9.6e-62 240.7 198 62.6
GSVIVG01020010001 Vitis vinifera HOM05D004366 ORTHO05D005058 9.6e-62 240.7 167 74.9
Cfa008996 Carpinus fangiana HOM05D004366 ORTHO05D005058 7.6e-59 231.1 219 58.0
vmacro01244 Vaccinium macrocarpon HOM05D004366 ORTHO05D005058 9.9e-59 230.7 253 52.6
SGA_v2.0_scaffold53G19387 Striga asiatica HOM05D004366 ORTHO05D005058 3.2e-57 225.7 237 56.1
TPR.G39101 Trifolium pratense HOM05D004366 ORTHO05D005058 6.6e-55 218.0 167 67.7
vmacro01242 Vaccinium macrocarpon HOM05D004366 ORTHO05D005058 1.4e-49 200.3 228 51.8
AagrBONN_evm.TU.Sc2ySwM_344.5131 Anthoceros agrestis HOM05D004366 ORTHO05D005058 3.2e-49 199.1 198 50.5
Pp3c9_14930 Physcomitrium patens HOM05D004366 ORTHO05D005058 3.2e-49 199.1 192 53.1
DCAR_027406 Daucus carota HOM05D002775 ORTHO05D005058 1.2e-43 180.6 128 72.7
Dinv16634 Davidia involucrata HOM05D004366 ORTHO05D005058 1.2e-43 180.6 112 78.6
SMO147G0050 Selaginella moellendorffii HOM05D004366 ORTHO05D005058 1.2e-43 180.6 200 50.0
CBR_g17957 Chara braunii HOM05D004366 ORTHO05D005058 1.7e-42 176.8 197 48.2
arahy.Tifrunner.gnm1.ann1.4LW61L Arachis hypogaea HOM05D004366 ORTHO05D005058 4.2e-41 172.2 117 70.9
TAR629G2773 Trochodendron aralioides HOM05D004366 ORTHO05D005058 5.5e-41 171.8 112 74.1
SalBow2G3183 Salvia bowleyana HOM05D004366 ORTHO05D005058 6.2e-37 158.3 116 70.7
MD11G1061500 Malus domestica HOM05D004366 ORTHO05D005058 1.4e-36 157.1 112 68.8
AagrBONN_evm.TU.Sc2ySwM_362.1786 Anthoceros agrestis HOM05D004366 ORTHO05D005058 2.4e-36 156.4 182 46.7
Pp3c15_14240 Physcomitrium patens HOM05D004366 ORTHO05D005058 4.0e-36 155.6 162 52.5
Potri.019G023800 Populus trichocarpa HOM05D004366 ORTHO05D005058 1.8e-31 140.2 94 68.1
FAN07G2952 Fragaria x ananassa HOM05D004366 ORTHO05D005058 6.7e-31 138.3 75 90.7
Mapoly0113s0045 Marchantia polymorpha HOM05D004366 ORTHO05D005058 7.4e-30 134.8 211 37.4
MSTRG.695 Avicennia marina HOM05D004366 ORTHO05D005058 2.1e-29 133.3 85 72.9
arahy.Tifrunner.gnm1.ann1.MY0RSE Arachis hypogaea HOM05D004366 ORTHO05D005058 2.8e-29 132.9 103 65.0
CSS0042124 Camellia sinensis var. sinensis HOM05D004366 ORTHO05D005058 1.8e-28 130.2 81 76.5
CSS0000370 Camellia sinensis var. sinensis HOM05D004366 ORTHO05D005058 1.2e-27 127.5 81 74.1
arahy.Tifrunner.gnm1.ann1.J913Y5 Arachis hypogaea HOM05D004366 ORTHO05D005058 1.7e-26 123.6 84 69.0
MCO13G325 Micromonas commoda HOM05D004366 ORTHO05D005058 3.8e-26 122.5 202 38.6
Lj6A789T49 Lonicera japonica HOM05D004366 ORTHO05D005058 5.5e-25 118.6 87 65.5
arahy.Tifrunner.gnm1.ann1.D4KK35 Arachis hypogaea HOM05D004366 ORTHO05D005058 7.2e-25 118.2 127 52.8
CAN.G154.11 Capsicum annuum HOM05D004366 ORTHO05D005058 2.8e-21 106.3 130 47.7
Rhsim11G0057700 Rhododendron simsii HOM05D004366 ORTHO05D005058 8.2e-21 104.8 72 72.2
PGSC0003DMG400015729 Solanum tuberosum HOM05D004366 ORTHO05D005058 1.8e-20 103.6 100 56.0
arahy.Tifrunner.gnm1.ann1.8CQ436 Arachis hypogaea HOM05D004366 ORTHO05D005058 5.3e-20 102.1 68 75.0
arahy.Tifrunner.gnm1.ann1.N9R1JE Arachis hypogaea HOM05D004366 ORTHO05D005058 6.9e-20 101.7 77 67.5
BcaC07g37109 Brassica carinata HOM05D004366 ORTHO05D005058 9.0e-20 101.3 74 66.2
C08p04780 Brassica napus HOM05D004366 ORTHO05D005058 2.6e-19 99.8 70 68.6
PRCOL_00002884 Prasinoderma coloniale HOM05D004366 ORTHO05D005058 7.7e-19 98.2 202 33.7
BolC8t47277H Brassica oleracea HOM05D004366 ORTHO05D005058 5.0e-18 95.5 75 65.3
Cre05.g244850 Chlamydomonas reinhardtii HOM05D004366 ORTHO05D005058 1.9e-17 93.6 193 34.7
Lsat_1_v5_gn_1_103541 Lactuca sativa HOM05D004366 ORTHO05D005058 1.8e-15 87.0 108 46.3
arahy.Tifrunner.gnm1.ann1.NKT7G2 Arachis hypogaea HOM05D004366 ORTHO05D005058 3.9e-15 85.9 115 47.0
CANSAT54G0841 Cannabis sativa HOM05D001400 ORTHO05D001795 7.4e-14 81.6 75 56.0
SalBow1G5797 Salvia bowleyana HOM05D004366 ORTHO05D005058 8.2e-13 78.2 45 77.8
AUR62028525 Chenopodium quinoa HOM05D004366 ORTHO05D000022 2.1e-08 63.5 47 63.8
A08p04480 Brassica napus HOM05D004366 ORTHO05D005058 4.7e-08 62.4 70 45.7
BraA08t32473Z Brassica rapa HOM05D004366 ORTHO05D005058 2.3e-07 60.1 40 67.5
Atru.chr9.1643 Acer truncatum HOM05D004366 ORTHO05D005058 3.9e-07 59.3 42 69.0
PSO339G3282 Papaver somniferum HOM05D000073 ORTHO05D000033 2.0e-06 57.0 48 58.3
RcHm_v2.0_Chr1g0352451 Rosa chinensis HOM05D004366 ORTHO05D005058 3.3e-06 56.2 34 82.4
TAR624G1239 Trochodendron aralioides HOM05D049658 ORTHO05D051498 7.4e-06 55.1 42 64.3


User provided reference genes

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