Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G2479 Fragaria x ananassa HOM05D007040 ORTHO05D001602 0.0e+00 1553.1 787 100.0
FAN27G3262 Fragaria x ananassa HOM05D007040 ORTHO05D001602 0.0e+00 1149.8 878 73.1
FAN23G1647 Fragaria x ananassa HOM05D007040 ORTHO05D001602 2.7e-306 1055.0 869 69.3
FAN23G1065 Fragaria x ananassa HOM05D007040 ORTHO05D001602 3.7e-295 1018.1 918 66.0
FAN23G0411 Fragaria x ananassa HOM05D007040 ORTHO05D001602 4.2e-291 1004.6 894 66.0
FAN05G2524 Fragaria x ananassa HOM05D007040 ORTHO05D001602 3.0e-268 928.7 872 62.2
FAN05G5575 Fragaria x ananassa HOM05D007040 ORTHO05D001602 1.7e-247 859.8 925 57.3
FAN21G2590 Fragaria x ananassa HOM05D007040 ORTHO05D001602 7.1e-230 801.2 632 68.8
FAN03G1439 Fragaria x ananassa HOM05D007040 ORTHO05D001602 7.9e-197 691.4 748 57.0
FvH4_2g14880 Fragaria vesca HOM05D007040 ORTHO05D012106 2.5e-182 643.3 793 52.2
FAN03G2120 Fragaria x ananassa HOM05D007040 ORTHO05D001602 1.0e-180 637.9 617 60.3
FAN02G4542 Fragaria x ananassa HOM05D007040 ORTHO05D001602 3.5e-168 596.3 406 77.3
FAN15G2806 Fragaria x ananassa HOM05D007040 ORTHO05D012106 6.5e-167 592.0 859 47.0
FAN09G3473 Fragaria x ananassa HOM05D007040 ORTHO05D001602 3.3e-166 589.7 778 49.7
FAN28G1344 Fragaria x ananassa HOM05D007040 ORTHO05D012106 1.9e-153 547.4 648 53.7
FAN04G2361 Fragaria x ananassa HOM05D007040 ORTHO05D001602 2.5e-150 537.0 385 74.5
FAN16G1060 Fragaria x ananassa HOM05D007040 ORTHO05D012106 3.0e-143 513.5 579 57.0
FAN02G2163 Fragaria x ananassa HOM05D007040 ORTHO05D001602 1.2e-125 454.9 329 75.1
FAN20G0008 Fragaria x ananassa HOM05D007040 ORTHO05D001602 1.1e-124 451.8 453 59.6
FAN26G0720 Fragaria x ananassa HOM05D007040 ORTHO05D001602 2.7e-120 437.2 458 56.3
FAN08G1044 Fragaria x ananassa HOM05D007040 ORTHO05D001602 1.9e-118 431.0 311 72.7
FAN16G1082 Fragaria x ananassa HOM05D007040 ORTHO05D001602 1.0e-111 408.7 405 61.7
FAN02G0486 Fragaria x ananassa HOM05D007040 ORTHO05D001602 1.8e-111 407.9 304 71.4
FAN14G1747 Fragaria x ananassa HOM05D007040 ORTHO05D001602 1.9e-105 387.9 915 33.3
FvH4_2g16120 Fragaria vesca HOM05D007040 ORTHO05D012106 2.6e-99 367.5 494 50.6
FAN15G1458 Fragaria x ananassa HOM05D007040 ORTHO05D001602 5.5e-89 333.2 830 32.7
FAN28G0487 Fragaria x ananassa HOM05D007040 ORTHO05D001602 3.1e-84 317.4 215 78.1
FAN24G1646 Fragaria x ananassa HOM05D007040 ORTHO05D012106 2.1e-80 304.7 646 38.2
FAN05G4005 Fragaria x ananassa HOM05D007040 ORTHO05D001602 5.9e-75 286.6 287 58.5
FAN23G0445 Fragaria x ananassa HOM05D007040 ORTHO05D001602 1.1e-70 272.3 175 80.0
FAN20G2554 Fragaria x ananassa HOM05D007040 ORTHO05D012106 2.2e-69 268.1 333 54.7
FAN01G2028 Fragaria x ananassa HOM05D007040 ORTHO05D199991 4.8e-69 266.9 228 66.2
FAN01G2694 Fragaria x ananassa HOM05D007040 ORTHO05D012106 2.4e-60 238.0 346 46.2
FAN05G2679 Fragaria x ananassa HOM05D007040 ORTHO05D012106 5.3e-60 236.9 174 73.0
FvH4_6g24041 Fragaria vesca HOM05D007040 ORTHO05D001602 6.3e-53 213.4 270 43.3
FAN27G2232 Fragaria x ananassa HOM05D007040 ORTHO05D001602 1.6e-51 208.8 525 34.7
FAN23G0019 Fragaria x ananassa HOM05D007040 ORTHO05D012106 4.5e-51 207.2 791 29.1
FAN01G1866 Fragaria x ananassa HOM05D007040 ORTHO05D001602 2.1e-48 198.4 135 74.8
FAN16G0652 Fragaria x ananassa HOM05D007040 ORTHO05D012106 2.8e-45 188.0 224 53.6
FAN17G1088 Fragaria x ananassa HOM05D007040 ORTHO05D017016 1.4e-39 169.1 903 24.1
FAN21G0127 Fragaria x ananassa HOM05D007040 ORTHO05D012106 1.8e-39 168.7 142 65.5
FAN07G2054 Fragaria x ananassa HOM05D007040 ORTHO05D017016 6.8e-39 166.8 609 28.4
FvH4_2g11190 Fragaria vesca HOM05D007040 ORTHO05D001602 1.5e-38 165.6 493 28.4
FvH4_2g16130 Fragaria vesca HOM05D007040 ORTHO05D001602 2.3e-34 151.8 145 58.6
FAN24G2329 Fragaria x ananassa HOM05D007040 ORTHO05D001602 3.3e-33 147.9 148 55.4
FAN20G2118 Fragaria x ananassa HOM05D007040 ORTHO05D001602 2.1e-32 145.2 188 44.1
FvH4_6g24050 Fragaria vesca HOM05D007040 ORTHO05D012106 1.8e-31 142.1 181 47.0
FAN26G2159 Fragaria x ananassa HOM05D007040 ORTHO05D012106 1.7e-29 135.6 186 45.7
FAN16G2256 Fragaria x ananassa HOM05D007040 ORTHO05D001602 7.1e-28 130.2 81 81.5
FAN26G1067 Fragaria x ananassa HOM05D002010 ORTHO05D001602 5.2e-23 114.0 186 38.7
FvH4_1g25700 Fragaria vesca HOM05D007040 ORTHO05D017016 1.5e-22 112.5 199 35.2
FvH4_1g02840 Fragaria vesca HOM05D007040 ORTHO05D025561 2.2e-21 108.6 182 38.5
FAN05G3694 Fragaria x ananassa HOM05D007040 ORTHO05D017016 8.3e-21 106.7 604 25.0
FAN05G0243 Fragaria x ananassa HOM05D007040 ORTHO05D017016 3.2e-20 104.8 605 24.6
FAN28G1047 Fragaria x ananassa HOM05D007040 ORTHO05D025383 3.2e-20 104.8 384 28.9
FvH4_3g40630 Fragaria vesca HOM05D007040 ORTHO05D012106 4.1e-20 104.4 159 43.4
FAN11G0258 Fragaria x ananassa HOM05D007040 ORTHO05D012106 4.1e-20 104.4 159 43.4
FAN25G2376 Fragaria x ananassa HOM05D007040 ORTHO05D012106 5.4e-20 104.0 159 43.4
FvH4_2g11201 Fragaria vesca HOM05D007040 ORTHO05D012106 9.2e-20 103.2 125 48.0
FAN16G0371 Fragaria x ananassa HOM05D007040 ORTHO05D025561 1.6e-19 102.4 176 36.9
FAN16G2465 Fragaria x ananassa HOM05D007040 ORTHO05D012106 1.6e-19 102.4 159 43.4
FAN21G3691 Fragaria x ananassa HOM05D007040 ORTHO05D012106 2.1e-19 102.1 159 42.1
FAN27G2478 Fragaria x ananassa HOM05D007040 ORTHO05D012106 6.0e-19 100.5 121 47.9
RcHm_v2.0_Chr1g0348241 Rosa chinensis HOM05D007040 ORTHO05D012106 1.7e-18 99.0 121 46.3
FAN04G0214 Fragaria x ananassa HOM05D007040 ORTHO05D012106 1.1e-17 96.3 100 56.0
FAN28G2387 Fragaria x ananassa HOM05D007040 ORTHO05D012106 3.3e-17 94.7 119 47.1
FAN16G1318 Fragaria x ananassa HOM05D007040 ORTHO05D017016 9.6e-17 93.2 323 27.9
FAN02G3936 Fragaria x ananassa HOM05D007040 ORTHO05D001602 3.6e-16 91.3 133 40.6
FvH4_4g02210 Fragaria vesca HOM05D007040 ORTHO05D017016 3.1e-15 88.2 566 24.0
RcHm_v2.0_Chr2g0144471 Rosa chinensis HOM05D007040 ORTHO05D025561 8.9e-15 86.7 175 33.7
RcHm_v2.0_Chr5g0047301 Rosa chinensis HOM05D007040 ORTHO05D017016 8.9e-15 86.7 597 23.6
QL02p010396 Quercus lobata HOM05D002010 ORTHO05D000502 2.6e-14 85.1 175 35.4
PSO170G3031 Papaver somniferum HOM05D002010 ORTHO05D001602 3.4e-14 84.7 246 28.0
Dinv12198 Davidia involucrata HOM05D002010 ORTHO05D001602 7.6e-14 83.6 229 28.8
Dinv04569 Davidia involucrata HOM05D002010 ORTHO05D001602 6.4e-13 80.5 253 28.5
FAN15G1914 Fragaria x ananassa HOM05D007040 ORTHO05D001602 1.9e-12 79.0 50 72.0
Dinv02873 Davidia involucrata HOM05D002010 ORTHO05D001602 4.2e-12 77.8 227 30.0
FAN10G0682 Fragaria x ananassa HOM05D007040 ORTHO05D025561 4.2e-12 77.8 165 33.9
FAN10G1812 Fragaria x ananassa HOM05D007040 ORTHO05D025561 4.2e-12 77.8 165 33.9
FAN03G1838 Fragaria x ananassa HOM05D007040 ORTHO05D206768 5.4e-12 77.4 46 80.4
Dinv13642 Davidia involucrata HOM05D002010 ORTHO05D001602 1.6e-11 75.9 269 28.3
Rhsim02G0158500 Rhododendron simsii HOM05D008460 ORTHO05D001602 2.1e-11 75.5 232 28.4
Dinv10265 Davidia involucrata HOM05D002010 ORTHO05D001602 3.5e-11 74.7 126 34.9
FAN03G1208 Fragaria x ananassa HOM05D007040 ORTHO05D202487 3.5e-11 74.7 44 79.5
Dinv00203 Davidia involucrata HOM05D002010 ORTHO05D001602 7.8e-11 73.6 268 26.5
FAN13G0440 Fragaria x ananassa HOM05D007040 ORTHO05D001602 1.0e-10 73.2 151 33.8
Dinv08992 Davidia involucrata HOM05D002010 ORTHO05D001602 1.7e-10 72.4 268 26.5
Dinv13093 Davidia involucrata HOM05D002010 ORTHO05D001602 1.7e-10 72.4 276 26.4
FAN24G1686 Fragaria x ananassa HOM05D007040 ORTHO05D012106 1.7e-10 72.4 62 59.7
Dinv11378 Davidia involucrata HOM05D002010 ORTHO05D001602 2.3e-10 72.0 235 28.1
Dinv24716 Davidia involucrata HOM05D002010 ORTHO05D001602 2.3e-10 72.0 276 26.4
Dinv00969 Davidia involucrata HOM05D002010 ORTHO05D001602 3.0e-10 71.6 272 26.5
Dinv04682 Davidia involucrata HOM05D002010 ORTHO05D001602 3.0e-10 71.6 272 26.5
Dinv10756 Davidia involucrata HOM05D002010 ORTHO05D001602 3.0e-10 71.6 272 26.1
Dinv12540 Davidia involucrata HOM05D002010 ORTHO05D001602 3.0e-10 71.6 269 27.5
TAR362G1336 Trochodendron aralioides HOM05D002010 ORTHO05D001602 3.9e-10 71.2 261 25.3
TAR624G0271 Trochodendron aralioides HOM05D002010 ORTHO05D001602 3.9e-10 71.2 226 26.5
Dinv25862 Davidia involucrata HOM05D002010 ORTHO05D001602 5.1e-10 70.9 276 26.1
Dinv03360 Davidia involucrata HOM05D002010 ORTHO05D001602 6.6e-10 70.5 268 26.1
Dinv13534 Davidia involucrata HOM05D002010 ORTHO05D001602 6.6e-10 70.5 229 26.6
Dinv37125 Davidia involucrata HOM05D002010 ORTHO05D001602 6.6e-10 70.5 268 26.9
PSO111G0036 Papaver somniferum HOM05D002010 ORTHO05D001602 8.7e-10 70.1 225 25.8
Dinv19302 Davidia involucrata HOM05D002010 ORTHO05D001602 1.1e-09 69.7 280 25.4
PSO782G1237 Papaver somniferum HOM05D002010 ORTHO05D001602 1.1e-09 69.7 248 25.4
Rhsim10G0123400 Rhododendron simsii HOM05D002010 ORTHO05D001602 1.1e-09 69.7 132 34.8
Dinv03884 Davidia involucrata HOM05D002010 ORTHO05D001602 1.5e-09 69.3 276 26.1
Dinv21511 Davidia involucrata HOM05D002010 ORTHO05D001602 1.5e-09 69.3 272 27.6
Dinv39029 Davidia involucrata HOM05D002010 ORTHO05D001602 1.5e-09 69.3 272 26.1
Dinv05229 Davidia involucrata HOM05D002010 ORTHO05D001602 1.9e-09 68.9 272 26.5
Dinv09159 Davidia involucrata HOM05D002010 ORTHO05D001602 1.9e-09 68.9 268 25.0
RhsimUnG0008800 Rhododendron simsii HOM05D008460 ORTHO05D001602 1.9e-09 68.9 266 25.6
Rhsim13G0205100 Rhododendron simsii HOM05D008460 ORTHO05D001602 2.5e-09 68.6 266 25.6
COL.COLO4_10437 Corchorus olitorius HOM05D015334 ORTHO05D001602 3.3e-09 68.2 233 28.8
Dinv27623 Davidia involucrata HOM05D002010 ORTHO05D001602 5.6e-09 67.4 169 29.6
Rhsim02G0170800 Rhododendron simsii HOM05D008460 ORTHO05D001602 5.6e-09 67.4 266 25.6
Rhsim04G0055800 Rhododendron simsii HOM05D008460 ORTHO05D001602 5.6e-09 67.4 266 25.6
Dinv08300 Davidia involucrata HOM05D002010 ORTHO05D001602 7.3e-09 67.0 268 24.6
PSO782G1846 Papaver somniferum HOM05D002010 ORTHO05D001602 9.6e-09 66.6 246 25.2
vmacro14347 Vaccinium macrocarpon HOM05D002010 ORTHO05D001602 1.3e-08 66.2 193 28.0
Dinv26201 Davidia involucrata HOM05D002010 ORTHO05D001602 1.6e-08 65.9 268 25.4
Rhsim12G0101900 Rhododendron simsii HOM05D008460 ORTHO05D001602 2.1e-08 65.5 266 25.2
Dinv34720 Davidia involucrata HOM05D002010 ORTHO05D001602 2.8e-08 65.1 196 27.6
TAR627G0107 Trochodendron aralioides HOM05D002010 ORTHO05D001602 2.8e-08 65.1 137 33.6
Dinv09626 Davidia involucrata HOM05D002010 ORTHO05D001602 3.6e-08 64.7 183 29.0
VMungo0540G1413 Vigna mungo HOM05D001371 ORTHO05D001319 3.6e-08 64.7 329 26.1
Dinv15902 Davidia involucrata HOM05D002010 ORTHO05D001602 4.8e-08 64.3 260 25.4
Dinv40634 Davidia involucrata HOM05D002010 ORTHO05D001602 4.8e-08 64.3 195 27.7
Dinv20775 Davidia involucrata HOM05D002010 ORTHO05D001602 1.1e-07 63.2 265 26.0
PSO675G6341 Papaver somniferum HOM05D002010 ORTHO05D001602 1.1e-07 63.2 250 25.6
RhsimUnG0116700 Rhododendron simsii HOM05D008460 ORTHO05D001602 1.8e-07 62.4 262 24.4
PSO541G5229 Papaver somniferum HOM05D002010 ORTHO05D001602 2.4e-07 62.0 241 24.9
Rhsim06G0043900 Rhododendron simsii HOM05D008460 ORTHO05D001602 2.4e-07 62.0 665 22.7
COL.COLO4_05875 Corchorus olitorius HOM05D002010 ORTHO05D001602 3.1e-07 61.6 162 27.8
FAN23G1311 Fragaria x ananassa HOM05D007040 ORTHO05D001602 3.1e-07 61.6 42 61.9
TAR627G0184 Trochodendron aralioides HOM05D002010 ORTHO05D001602 4.0e-07 61.2 160 30.6
Dinv36416 Davidia involucrata HOM05D002010 ORTHO05D001602 5.3e-07 60.8 194 26.8
FAN24G3215 Fragaria x ananassa HOM05D007040 ORTHO05D001602 5.3e-07 60.8 34 76.5
PSO210G0707 Papaver somniferum HOM05D002010 ORTHO05D001602 5.3e-07 60.8 265 23.0
PSO478G3183 Papaver somniferum HOM05D002010 ORTHO05D001602 5.3e-07 60.8 209 26.8
Rhsim01G0106400 Rhododendron simsii HOM05D002010 ORTHO05D001602 5.3e-07 60.8 201 26.9
PSO170G4374 Papaver somniferum HOM05D002010 ORTHO05D001602 6.9e-07 60.5 187 23.5
TAR629G2840 Trochodendron aralioides HOM05D002010 ORTHO05D001602 6.9e-07 60.5 238 26.9
EL10Ac4g07860 Beta vulgaris HOM05D001371 ORTHO05D001319 9.0e-07 60.1 292 24.0
CANSAT80G2073 Cannabis sativa HOM05D002010 ORTHO05D001602 9.0e-07 60.1 261 25.7
PSO339G3181 Papaver somniferum HOM05D002010 ORTHO05D001602 9.0e-07 60.1 243 24.3
RhsimUnG0112000 Rhododendron simsii HOM05D002010 ORTHO05D001602 9.0e-07 60.1 201 24.9
BcaC08g43256 Brassica carinata HOM05D001371 ORTHO05D001319 1.2e-06 59.7 206 26.7
C06p06020 Brassica napus HOM05D001371 ORTHO05D001319 1.2e-06 59.7 206 26.7
BolC6t35715H Brassica oleracea HOM05D001371 ORTHO05D001319 1.2e-06 59.7 206 26.7
Dinv19806 Davidia involucrata HOM05D002010 ORTHO05D001602 1.2e-06 59.7 158 29.1
Dinv23080 Davidia involucrata HOM05D002010 ORTHO05D001602 1.2e-06 59.7 158 29.1
Dinv37000 Davidia involucrata HOM05D002010 ORTHO05D001602 1.2e-06 59.7 158 29.1
Rhsim04G0153800 Rhododendron simsii HOM05D002010 ORTHO05D001602 1.2e-06 59.7 201 25.4
TAR625G0747 Trochodendron aralioides HOM05D002010 ORTHO05D001602 1.2e-06 59.7 128 32.0
Dinv14701 Davidia involucrata HOM05D002010 ORTHO05D001602 2.6e-06 58.5 182 27.5
Dinv30309 Davidia involucrata HOM05D002010 ORTHO05D001602 2.6e-06 58.5 198 26.3
FAN02G4583 Fragaria x ananassa HOM05D007040 ORTHO05D205290 2.6e-06 58.5 64 51.6
PSO782G2343 Papaver somniferum HOM05D002010 ORTHO05D001602 2.6e-06 58.5 270 23.0
Dinv07285 Davidia involucrata HOM05D002010 ORTHO05D001602 3.4e-06 58.2 199 27.1
PSO832G3401 Papaver somniferum HOM05D002010 ORTHO05D001602 3.4e-06 58.2 225 25.3
arahy.Tifrunner.gnm1.ann1.Y9R7EH Arachis hypogaea HOM05D001371 ORTHO05D001319 4.4e-06 57.8 168 29.8
Rhsim06G0133000 Rhododendron simsii HOM05D008460 ORTHO05D001602 5.8e-06 57.4 138 29.7
arahy.Tifrunner.gnm1.ann1.UWY4YC Arachis hypogaea HOM05D001371 ORTHO05D001319 7.6e-06 57.0 168 29.8
Dinv21136 Davidia involucrata HOM05D002010 ORTHO05D001602 7.6e-06 57.0 154 31.2
Rhsim09G0100100 Rhododendron simsii HOM05D008460 ORTHO05D001602 7.6e-06 57.0 630 22.7
CSS0003895 Camellia sinensis var. sinensis HOM05D002010 ORTHO05D001602 9.9e-06 56.6 265 27.5
Rhsim08G0147800 Rhododendron simsii HOM05D008460 ORTHO05D001602 9.9e-06 56.6 666 23.1


User provided reference genes

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