Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G2437 Fragaria x ananassa HOM05D017087 ORTHO05D019163 4.0e-223 777.7 375 100.0
FvH4_4g05500 Fragaria vesca HOM05D017087 ORTHO05D019163 2.7e-163 578.9 376 79.0
FAN12G4045 Fragaria x ananassa HOM05D017087 ORTHO05D019163 9.4e-156 553.9 318 87.4
FAN12G4018 Fragaria x ananassa HOM05D017087 ORTHO05D019163 1.2e-102 377.5 252 76.2
FvH4_4g05202 Fragaria vesca HOM05D017087 ORTHO05D019163 8.1e-91 338.2 201 82.1
FAN07G1148 Fragaria x ananassa HOM05D017087 ORTHO05D019163 2.4e-66 256.9 135 88.9
FAN22G1680 Fragaria x ananassa HOM05D017087 ORTHO05D019163 1.0e-64 251.5 166 77.7
Prupe.1G052900 Prunus persica HOM05D014139 ORTHO05D020686 1.2e-33 148.3 336 37.8
Prupe.1G053000 Prunus persica HOM05D014139 ORTHO05D020686 1.6e-33 147.9 350 37.4
FAN07G2825 Fragaria x ananassa HOM05D017087 ORTHO05D198739 4.5e-33 146.4 76 90.8
FAN11G0344 Fragaria x ananassa HOM05D014139 ORTHO05D020686 1.9e-31 141.0 369 33.1
FAN11G3701 Fragaria x ananassa HOM05D014139 ORTHO05D020686 3.2e-31 140.2 369 33.1
FvH4_3g15921 Fragaria vesca HOM05D014139 ORTHO05D020686 9.4e-31 138.7 369 33.1
FAN21G2767 Fragaria x ananassa HOM05D014139 ORTHO05D020686 1.2e-30 138.3 369 33.1
FvH4_7g24700 Fragaria vesca HOM05D014139 ORTHO05D046366 7.2e-23 112.5 345 31.0
Eucgr.H00116 Eucalyptus grandis HOM05D000151 ORTHO05D000074 1.4e-21 108.2 348 30.7
Duzib151G0485 Durio zibethinus HOM05D000151 ORTHO05D000074 1.5e-20 104.8 383 27.7
Peaxi162Scf00119g01111 Petunia axillaris HOM05D000151 ORTHO05D000074 7.5e-20 102.4 331 29.6
Eucgr.H00114 Eucalyptus grandis HOM05D000151 ORTHO05D000074 1.3e-19 101.7 357 27.2
CANSAT25G2327 Cannabis sativa HOM05D000151 ORTHO05D000074 1.1e-18 98.6 348 28.2
Haze_02452 Corylus avellana HOM05D000151 ORTHO05D000074 4.1e-18 96.7 402 29.1
TWI09G1230 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 5.4e-18 96.3 344 26.7
Peaxi162Scf00119g00124 Petunia axillaris HOM05D000151 ORTHO05D000074 7.0e-18 95.9 329 28.6
Cfa001991 Carpinus fangiana HOM05D000151 ORTHO05D000074 9.2e-18 95.5 394 29.4
Ciclev10006735m.g Citrus clementina HOM05D000151 ORTHO05D000074 1.2e-17 95.1 356 27.8
RcHm_v2.0_Chr4g0395201 Rosa chinensis HOM05D000151 ORTHO05D000074 1.2e-17 95.1 335 28.7
Hma1.2p1_0112F.1_g054880 Hydrangea macrophylla HOM05D000151 ORTHO05D000074 1.6e-17 94.7 351 27.4
Cfa014059 Carpinus fangiana HOM05D000151 ORTHO05D000074 2.0e-17 94.4 344 27.0
QL05p064445 Quercus lobata HOM05D000151 ORTHO05D000074 2.0e-17 94.4 357 28.6
Peaxi162Scf00119g00123 Petunia axillaris HOM05D000151 ORTHO05D000074 2.7e-17 94.0 331 28.4
Dinv34063 Davidia involucrata HOM05D000151 ORTHO05D000074 7.8e-17 92.4 331 28.7
Peaxi162Scf00074g00631 Petunia axillaris HOM05D000151 ORTHO05D000074 7.8e-17 92.4 335 29.0
Cfa001654 Carpinus fangiana HOM05D000151 ORTHO05D000074 1.0e-16 92.0 398 29.1
TWI74G0260 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 1.0e-16 92.0 384 27.1
TWI53G1253 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 1.7e-16 91.3 332 29.8
Prupe.6G285500 Prunus persica HOM05D000151 ORTHO05D000074 2.3e-16 90.9 356 27.2
Cfa014025 Carpinus fangiana HOM05D000151 ORTHO05D000074 2.9e-16 90.5 384 26.6
Nn6g31858 Nelumbo nucifera HOM05D000151 ORTHO05D000074 2.9e-16 90.5 344 27.6
PSO170G4594 Papaver somniferum HOM05D000151 ORTHO05D000074 2.9e-16 90.5 339 27.4
TAR628G1200 Trochodendron aralioides HOM05D000151 ORTHO05D000074 3.9e-16 90.1 340 27.6
TAR636G2770 Trochodendron aralioides HOM05D000151 ORTHO05D000074 5.0e-16 89.7 392 24.7
CiPaw.08G069900 Carya illinoinensis HOM05D000151 ORTHO05D000074 1.5e-15 88.2 380 25.3
FvH4_4g04480 Fragaria vesca HOM05D000151 ORTHO05D000074 1.5e-15 88.2 344 28.5
Gohir.A12G258800 Gossypium hirsutum HOM05D000151 ORTHO05D000074 1.9e-15 87.8 362 26.0
Lj2C486T7 Lonicera japonica HOM05D000151 ORTHO05D000074 1.9e-15 87.8 322 28.6
Lj2P493T39 Lonicera japonica HOM05D000151 ORTHO05D000074 1.9e-15 87.8 332 26.5
Lj2P495T35 Lonicera japonica HOM05D000151 ORTHO05D000074 1.9e-15 87.8 332 27.4
TAR636G1120 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.9e-15 87.8 378 26.2
CiPaw.06G077200 Carya illinoinensis HOM05D000151 ORTHO05D000074 3.3e-15 87.0 344 27.9
Prupe.1G050400 Prunus persica HOM05D000151 ORTHO05D000074 3.3e-15 87.0 354 28.0
Cfa014034 Carpinus fangiana HOM05D000151 ORTHO05D000074 5.6e-15 86.3 363 24.5
FAN12G2073 Fragaria x ananassa HOM05D004442 ORTHO05D002066 5.6e-15 86.3 343 27.7
QL04p019119 Quercus lobata HOM05D000151 ORTHO05D000074 5.6e-15 86.3 354 28.2
CiPaw.08G070000 Carya illinoinensis HOM05D000151 ORTHO05D000074 7.3e-15 85.9 359 26.7
CiPaw.06G046500 Carya illinoinensis HOM05D000151 ORTHO05D000074 9.5e-15 85.5 340 27.6
Gohir.D12G260000 Gossypium hirsutum HOM05D000151 ORTHO05D000074 1.2e-14 85.1 366 26.2
Gorai.008G278500 Gossypium raimondii HOM05D000151 ORTHO05D000074 1.2e-14 85.1 366 26.2
Lj2C484T9 Lonicera japonica HOM05D000151 ORTHO05D000074 1.6e-14 84.7 319 28.5
Lj2P485T10 Lonicera japonica HOM05D000151 ORTHO05D000074 2.1e-14 84.3 317 27.1
Peaxi162Scf00074g00085 Petunia axillaris HOM05D000151 ORTHO05D000074 2.1e-14 84.3 333 29.4
QL01p002550 Quercus lobata HOM05D000151 ORTHO05D000074 2.1e-14 84.3 360 29.4
Dinv35548 Davidia involucrata HOM05D000151 ORTHO05D000074 2.8e-14 84.0 307 27.7
Eucgr.F03527 Eucalyptus grandis HOM05D000151 ORTHO05D000074 2.8e-14 84.0 349 25.5
PSO210G2694 Papaver somniferum HOM05D000151 ORTHO05D000074 2.8e-14 84.0 280 28.9
Aqoxy2G00614 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 3.6e-14 83.6 342 28.4
TAR629G1936 Trochodendron aralioides HOM05D000151 ORTHO05D000074 4.7e-14 83.2 333 25.2
CSS0038976 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 6.2e-14 82.8 358 26.5
TAR629G0126 Trochodendron aralioides HOM05D000151 ORTHO05D000074 6.2e-14 82.8 333 26.1
QL03p049732 Quercus lobata HOM05D000151 ORTHO05D000074 8.0e-14 82.4 306 25.8
CSS0028834 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 1.4e-13 81.6 358 26.0
Haze_16879 Corylus avellana HOM05D000151 ORTHO05D000074 1.4e-13 81.6 367 28.3
QL09p049374 Quercus lobata HOM05D000151 ORTHO05D000074 1.8e-13 81.3 333 27.3
Eucgr.B03923 Eucalyptus grandis HOM05D000151 ORTHO05D000074 2.3e-13 80.9 376 25.0
FAN10G0490 Fragaria x ananassa HOM05D014139 ORTHO05D000074 2.3e-13 80.9 205 33.7
Actinidia15471 Actinidia chinensis HOM05D000151 ORTHO05D000074 3.1e-13 80.5 334 25.1
Dinv12023 Davidia involucrata HOM05D000151 ORTHO05D000074 3.1e-13 80.5 338 26.3
RcHm_v2.0_Chr3g0452431 Rosa chinensis HOM05D000151 ORTHO05D000074 3.1e-13 80.5 351 27.6
Dinv12036 Davidia involucrata HOM05D000151 ORTHO05D000074 4.0e-13 80.1 338 26.3
Hma1.2p1_0367F.1_g137170 Hydrangea macrophylla HOM05D000151 ORTHO05D000074 4.0e-13 80.1 349 28.1
FvH4_4g30091 Fragaria vesca HOM05D022879 ORTHO05D000074 5.2e-13 79.7 345 26.7
FAN22G0114 Fragaria x ananassa HOM05D000151 ORTHO05D000074 5.2e-13 79.7 332 25.9
Lj2P549T12 Lonicera japonica HOM05D000151 ORTHO05D000074 5.2e-13 79.7 345 25.5
TAR629G2629 Trochodendron aralioides HOM05D000151 ORTHO05D000074 5.2e-13 79.7 365 24.7
MD13G1117600 Malus domestica HOM05D000151 ORTHO05D000074 6.8e-13 79.3 355 26.5
MSTRG.25800 Avicennia marina HOM05D000151 ORTHO05D000074 8.9e-13 79.0 331 26.9
Dinv27133 Davidia involucrata HOM05D000151 ORTHO05D000074 1.2e-12 78.6 346 26.0
Prupe.3G068500 Prunus persica HOM05D000151 ORTHO05D000074 1.5e-12 78.2 334 26.0
QL02p013380 Quercus lobata HOM05D000151 ORTHO05D000074 2.0e-12 77.8 345 26.1
Cfa014022 Carpinus fangiana HOM05D000151 ORTHO05D000074 3.4e-12 77.0 377 24.4
Lj7P286T29 Lonicera japonica HOM05D000151 ORTHO05D000074 3.4e-12 77.0 271 28.0
Dinv39566 Davidia involucrata HOM05D000151 ORTHO05D000074 4.4e-12 76.6 343 24.8
Lj7P286T40 Lonicera japonica HOM05D000151 ORTHO05D000074 4.4e-12 76.6 271 28.4
TWI63G1822 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 4.4e-12 76.6 343 28.0
TWI56G0068 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 5.8e-12 76.3 329 24.6
Dinv01675 Davidia involucrata HOM05D000151 ORTHO05D000074 7.5e-12 75.9 326 26.1
Dinv38970 Davidia involucrata HOM05D000151 ORTHO05D000074 9.8e-12 75.5 338 28.4
FAN17G1827 Fragaria x ananassa HOM05D000151 ORTHO05D000074 1.3e-11 75.1 343 27.1
Lj2P459T34 Lonicera japonica HOM05D000151 ORTHO05D000074 1.3e-11 75.1 342 26.0
Sopen02g036600 Solanum pennellii HOM05D000151 ORTHO05D000074 1.3e-11 75.1 335 27.8
FAN20G1383 Fragaria x ananassa HOM05D000151 ORTHO05D000074 1.7e-11 74.7 337 25.2
Dinv38966 Davidia involucrata HOM05D000151 ORTHO05D000074 2.9e-11 73.9 383 26.6
Lalb_Chr09g0321401 Lupinus albus HOM05D000151 ORTHO05D000074 2.9e-11 73.9 324 26.5
MD13G1223500 Malus domestica HOM05D000151 ORTHO05D000074 2.9e-11 73.9 353 26.9
Peaxi162Scf00074g00087 Petunia axillaris HOM05D000151 ORTHO05D000074 4.9e-11 73.2 348 27.0
TPR.G38135 Trifolium pratense HOM05D000151 ORTHO05D000074 4.9e-11 73.2 335 26.0
TWI12G0155 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 4.9e-11 73.2 272 27.6
QL04p008960 Quercus lobata HOM05D000151 ORTHO05D000074 6.4e-11 72.8 311 28.9
DCAR_023003 Daucus carota HOM05D000151 ORTHO05D000074 8.3e-11 72.4 339 25.4
FAN22G0511 Fragaria x ananassa HOM05D022879 ORTHO05D000074 8.3e-11 72.4 342 24.6
Medtr3g114990 Medicago truncatula HOM05D000151 ORTHO05D000074 8.3e-11 72.4 320 26.2
Potri.004G134900 Populus trichocarpa HOM05D000151 ORTHO05D000074 8.3e-11 72.4 398 23.6
RcHm_v2.0_Chr6g0303821 Rosa chinensis HOM05D000151 ORTHO05D000074 8.3e-11 72.4 336 25.6
Dinv38940 Davidia involucrata HOM05D000151 ORTHO05D000074 1.1e-10 72.0 379 26.6
Lj2P494T20 Lonicera japonica HOM05D000151 ORTHO05D000074 1.1e-10 72.0 332 25.9
QL04p009352 Quercus lobata HOM05D000151 ORTHO05D000074 1.1e-10 72.0 311 28.9
Lj2P547T18 Lonicera japonica HOM05D000151 ORTHO05D000074 1.4e-10 71.6 273 28.6
CiPaw.07G005300 Carya illinoinensis HOM05D000151 ORTHO05D000074 1.9e-10 71.2 359 26.2
Ciclev10001350m.g Citrus clementina HOM05D000151 ORTHO05D000074 1.9e-10 71.2 341 24.0
Dinv38968 Davidia involucrata HOM05D000151 ORTHO05D000074 1.9e-10 71.2 384 27.3
Prupe.1G228000 Prunus persica HOM05D000151 ORTHO05D000074 1.9e-10 71.2 382 23.8
Aqoxy7G03016 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 2.4e-10 70.9 357 24.1
Dinv15155 Davidia involucrata HOM05D016402 ORTHO05D016246 3.2e-10 70.5 175 30.9
FvH4_3g43771 Fragaria vesca HOM05D022879 ORTHO05D000074 4.1e-10 70.1 342 24.0
Lj2P546T15 Lonicera japonica HOM05D000151 ORTHO05D000074 4.1e-10 70.1 264 26.9
Lj2P546T28 Lonicera japonica HOM05D000151 ORTHO05D000074 4.1e-10 70.1 271 24.7
Dinv37646 Davidia involucrata HOM05D000151 ORTHO05D000074 5.4e-10 69.7 333 24.9
Haze_22777 Corylus avellana HOM05D000151 ORTHO05D000074 7.0e-10 69.3 210 29.0
Dinv04305 Davidia involucrata HOM05D000151 ORTHO05D000074 1.2e-09 68.6 399 25.1
Dinv38965 Davidia involucrata HOM05D000151 ORTHO05D000074 1.2e-09 68.6 345 27.5
Lj2P518T28 Lonicera japonica HOM05D000151 ORTHO05D000074 1.2e-09 68.6 269 27.1
MD16G1228400 Malus domestica HOM05D000151 ORTHO05D000074 1.2e-09 68.6 356 25.6
Nn1g04501 Nelumbo nucifera HOM05D000151 ORTHO05D000074 1.2e-09 68.6 165 33.9
Lj2P518T20 Lonicera japonica HOM05D000151 ORTHO05D000074 1.6e-09 68.2 270 27.4
TWI53G0532 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 1.6e-09 68.2 240 28.3
Lj1P828T11 Lonicera japonica HOM05D000151 ORTHO05D000074 2.7e-09 67.4 219 30.6
Lj2P545T26 Lonicera japonica HOM05D000151 ORTHO05D000074 3.5e-09 67.0 167 33.5
RcHm_v2.0_Chr1g0339581 Rosa chinensis HOM05D000151 ORTHO05D000074 3.5e-09 67.0 347 24.2
Dinv37470 Davidia involucrata HOM05D000151 ORTHO05D000074 4.6e-09 66.6 336 23.5
Dinv37497 Davidia involucrata HOM05D000151 ORTHO05D000074 4.6e-09 66.6 333 23.4
Lj3C74T1 Lonicera japonica HOM05D000151 ORTHO05D000074 4.6e-09 66.6 352 25.0
Psat0s4081g0040 Pisum sativum HOM05D000151 ORTHO05D000074 4.6e-09 66.6 351 21.9
Aqoxy7G03013 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 6.0e-09 66.2 353 24.1
Peaxi162Scf00074g00086 Petunia axillaris HOM05D000151 ORTHO05D000074 1.0e-08 65.5 267 28.5
ClCG05G015310 Citrullus lanatus HOM05D000151 ORTHO05D000074 1.7e-08 64.7 365 24.9
Duzib116G0495 Durio zibethinus HOM05D000151 ORTHO05D000074 1.7e-08 64.7 358 25.1
Aqoxy7G04052 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 2.3e-08 64.3 326 26.7
Dinv40803 Davidia involucrata HOM05D000151 ORTHO05D000074 3.0e-08 63.9 349 23.8
MBI15_g35731_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 3.0e-08 63.9 309 23.9
Haze_25246 Corylus avellana HOM05D000151 ORTHO05D000074 5.0e-08 63.2 319 22.6
Dinv03027 Davidia involucrata HOM05D000151 ORTHO05D000074 6.6e-08 62.8 206 27.7
TWI56G0047 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 8.6e-08 62.4 199 28.6
MSTRG.1137 Avicennia marina HOM05D000151 ORTHO05D000074 1.1e-07 62.0 334 23.7
PGR031G1698 Punica granatum HOM05D000151 ORTHO05D000074 1.1e-07 62.0 338 24.6
QL06p022014 Quercus lobata HOM05D000151 ORTHO05D000074 1.5e-07 61.6 226 29.6
Thecc.03G003800 Theobroma cacao HOM05D000151 ORTHO05D000074 1.5e-07 61.6 343 22.2
Haze_02115 Corylus avellana HOM05D007346 ORTHO05D009044 2.5e-07 60.8 353 25.2
Nn3g21038 Nelumbo nucifera HOM05D000151 ORTHO05D000074 2.5e-07 60.8 180 29.4
Thecc.03G003700 Theobroma cacao HOM05D000151 ORTHO05D000074 2.5e-07 60.8 343 21.6
FAN06G1811 Fragaria x ananassa HOM05D014139 ORTHO05D046366 3.3e-07 60.5 93 45.2
Lj4C37G10 Lonicera japonica HOM05D000151 ORTHO05D000074 3.3e-07 60.5 361 23.5
CsaV3_4G037010 Cucumis sativus L. HOM05D000151 ORTHO05D000074 4.3e-07 60.1 340 22.9
RcHm_v2.0_Chr4g0442931 Rosa chinensis HOM05D000151 ORTHO05D000074 4.3e-07 60.1 313 25.9
RcHm_v2.0_Chr6g0254631 Rosa chinensis HOM05D007346 ORTHO05D009044 4.3e-07 60.1 98 37.8
Thecc.08G054100 Theobroma cacao HOM05D000151 ORTHO05D000074 4.3e-07 60.1 350 23.7
Lj2P496T21 Lonicera japonica HOM05D000151 ORTHO05D000074 5.6e-07 59.7 274 25.5
Prupe.8G152400 Prunus persica HOM05D007346 ORTHO05D009044 5.6e-07 59.7 93 36.6
TWI63G1408 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 5.6e-07 59.7 363 26.7
Dinv07015 Davidia involucrata HOM05D000151 ORTHO05D000074 7.3e-07 59.3 207 27.1
Lj2P496T12 Lonicera japonica HOM05D000151 ORTHO05D000074 7.3e-07 59.3 292 25.0
Dinv37496 Davidia involucrata HOM05D000151 ORTHO05D000074 9.5e-07 58.9 333 22.8
FvH4_7g10560 Fragaria vesca HOM05D000151 ORTHO05D000074 9.5e-07 58.9 344 23.8
Prupe.6G184200 Prunus persica HOM05D000151 ORTHO05D000074 9.5e-07 58.9 387 24.3
Prupe.4G112800 Prunus persica HOM05D000151 ORTHO05D000074 1.2e-06 58.5 264 24.2
Aqoxy5G01063 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.6e-06 58.2 218 27.5
Hma1.2p1_0091F.1_g046550 Hydrangea macrophylla HOM05D000151 ORTHO05D000074 1.6e-06 58.2 353 26.6
Aqoxy5G01069 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 2.1e-06 57.8 218 26.1
Cfa007042 Carpinus fangiana HOM05D000151 ORTHO05D000074 2.1e-06 57.8 320 25.9
Dinv00092 Davidia involucrata HOM05D000151 ORTHO05D000074 2.1e-06 57.8 210 27.1
Gohir.A03G206500 Gossypium hirsutum HOM05D000151 ORTHO05D000074 2.1e-06 57.8 193 26.4
Aqoxy2G00256 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 2.8e-06 57.4 329 22.5
MD10G1231500 Malus domestica HOM05D000151 ORTHO05D000074 2.8e-06 57.4 363 21.8
RcHm_v2.0_Chr6g0254611 Rosa chinensis HOM05D007346 ORTHO05D009044 3.6e-06 57.0 98 36.7
Dinv37469 Davidia involucrata HOM05D000151 ORTHO05D000074 4.7e-06 56.6 310 21.9
FvH4_3g40751 Fragaria vesca HOM05D019358 ORTHO05D000074 4.7e-06 56.6 80 41.2
Lj1P1208T15 Lonicera japonica HOM05D000151 ORTHO05D000074 4.7e-06 56.6 263 26.2
RcHm_v2.0_Chr6g0254681 Rosa chinensis HOM05D007346 ORTHO05D009044 4.7e-06 56.6 98 36.7


User provided reference genes

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