Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G2426 Fragaria x ananassa HOM05D016268 ORTHO05D000038 1.5e-214 749.2 367 100.0
FAN17G2821 Fragaria x ananassa HOM05D016268 ORTHO05D000038 8.9e-143 510.8 251 100.0
FAN12G0269 Fragaria x ananassa HOM05D000082 ORTHO05D019548 4.2e-108 395.6 479 49.3
FAN12G0522 Fragaria x ananassa HOM05D000082 ORTHO05D019548 1.5e-94 350.5 466 46.6
FvH4_4g02720 Fragaria vesca HOM05D016268 ORTHO05D000038 6.5e-93 345.1 368 54.6
RcHm_v2.0_Chr4g0388871 Rosa chinensis HOM05D016268 ORTHO05D019548 9.4e-84 314.7 319 58.6
FvH4_4g01540 Fragaria vesca HOM05D000082 ORTHO05D019548 5.5e-76 288.9 298 55.0
FvH4_4g00060 Fragaria vesca HOM05D000082 ORTHO05D019548 5.7e-73 278.9 342 49.7
FAN17G1391 Fragaria x ananassa HOM05D016268 ORTHO05D000038 1.3e-53 214.5 323 43.0
FAN22G1490 Fragaria x ananassa HOM05D000082 ORTHO05D019548 7.5e-41 172.2 283 41.7
RcHm_v2.0_Chr4g0388511 Rosa chinensis HOM05D000082 ORTHO05D000038 3.9e-37 159.8 158 57.6
FAN12G3526 Fragaria x ananassa HOM05D016268 ORTHO05D000038 1.7e-29 134.4 121 66.9
FAN22G0749 Fragaria x ananassa HOM05D016268 ORTHO05D000038 8.7e-29 132.1 179 50.3
FAN22G1280 Fragaria x ananassa HOM05D040097 ORTHO05D199313 6.9e-26 122.5 216 39.8
FAN17G1170 Fragaria x ananassa HOM05D000082 ORTHO05D000038 3.9e-21 106.7 142 47.2
Prupe.8G048800 Prunus persica HOM05D000082 ORTHO05D000038 4.3e-12 76.6 70 47.1
FAN22G0976 Fragaria x ananassa HOM05D040097 ORTHO05D209334 1.8e-10 71.2 67 53.7
RcHm_v2.0_Chr4g0407861 Rosa chinensis HOM05D000082 ORTHO05D000038 2.6e-09 67.4 70 44.3
QL10p015716 Quercus lobata HOM05D000082 ORTHO05D000038 3.4e-09 67.0 95 37.9
Cfa008015 Carpinus fangiana HOM05D000082 ORTHO05D008689 3.8e-08 63.5 63 46.0
Potri.007G107000 Populus trichocarpa HOM05D000082 ORTHO05D000038 4.9e-08 63.2 68 42.6
MD14G1195700 Malus domestica HOM05D000082 ORTHO05D000038 6.4e-08 62.8 73 42.5
Prupe.6G084800 Prunus persica HOM05D000082 ORTHO05D000038 6.4e-08 62.8 69 44.9
MD02G1241100 Malus domestica HOM05D000082 ORTHO05D000038 8.4e-08 62.4 63 42.9
MBI11_g09869_MAGBIO Magnolia biondii HOM05D011607 ORTHO05D000038 1.1e-07 62.0 55 43.6
Potri.007G118000 Populus trichocarpa HOM05D000082 ORTHO05D000038 1.1e-07 62.0 68 41.2
RcHm_v2.0_Chr2g0107491 Rosa chinensis HOM05D000082 ORTHO05D000038 1.1e-07 62.0 68 45.6
RcHm_v2.0_Chr6g0295911 Rosa chinensis HOM05D000082 ORTHO05D000038 1.1e-07 62.0 63 39.7
MD06G1190000 Malus domestica HOM05D000082 ORTHO05D000038 1.9e-07 61.2 58 39.7
QL10p015738 Quercus lobata HOM05D000082 ORTHO05D000038 1.9e-07 61.2 68 38.2
RcHm_v2.0_Chr7g0182241 Rosa chinensis HOM05D000082 ORTHO05D000038 1.9e-07 61.2 72 40.3
Prupe.1G270300 Prunus persica HOM05D000082 ORTHO05D000038 2.4e-07 60.8 37 59.5
FvH4_1g17310 Fragaria vesca HOM05D000082 ORTHO05D000038 3.2e-07 60.5 67 44.8
FAN19G2743 Fragaria x ananassa HOM05D000082 ORTHO05D000038 3.2e-07 60.5 67 44.8
QL10p017068 Quercus lobata HOM05D000082 ORTHO05D000038 3.2e-07 60.5 69 39.1
Cfa002019 Carpinus fangiana HOM05D002312 ORTHO05D000038 4.2e-07 60.1 65 41.5
FAN17G2375 Fragaria x ananassa HOM05D016268 ORTHO05D208118 4.2e-07 60.1 26 96.2
FAN26G2829 Fragaria x ananassa HOM05D000082 ORTHO05D000038 4.2e-07 60.1 67 44.8
FAN28G1733 Fragaria x ananassa HOM05D007212 ORTHO05D009094 4.2e-07 60.1 67 44.8
Actinidia37650 Actinidia chinensis HOM05D000082 ORTHO05D000038 5.5e-07 59.7 58 48.3
CDE11G1015 Ceratophyllum demersum HOM05D000082 ORTHO05D000038 5.5e-07 59.7 39 53.8
FAN08G0929 Fragaria x ananassa HOM05D007878 ORTHO05D010022 5.5e-07 59.7 70 41.4
COL.COLO4_22964 Corchorus olitorius HOM05D000082 ORTHO05D000038 7.1e-07 59.3 44 43.2
FvH4_5g14420 Fragaria vesca HOM05D000082 ORTHO05D000038 7.1e-07 59.3 70 40.0
FAN18G0515 Fragaria x ananassa HOM05D000082 ORTHO05D000038 7.1e-07 59.3 70 40.0
FAN20G2391 Fragaria x ananassa HOM05D029497 ORTHO05D000038 7.1e-07 59.3 94 34.0
Prupe.1G495200 Prunus persica HOM05D000082 ORTHO05D000038 7.1e-07 59.3 63 36.5
RcHm_v2.0_Chr7g0215451 Rosa chinensis HOM05D000082 ORTHO05D000038 7.1e-07 59.3 48 54.2
Sabra07G0089700 Salix brachista HOM05D000082 ORTHO05D000038 7.1e-07 59.3 68 39.7
Cfa002018 Carpinus fangiana HOM05D000082 ORTHO05D000038 9.3e-07 58.9 65 40.0
Duzib268G1827 Durio zibethinus HOM05D000082 ORTHO05D000038 9.3e-07 58.9 63 39.7
FvH4_2g27040 Fragaria vesca HOM05D000082 ORTHO05D000038 9.3e-07 58.9 63 38.1
FAN24G0679 Fragaria x ananassa HOM05D029497 ORTHO05D000038 9.3e-07 58.9 63 38.1
MBI11_g29573_MAGBIO Magnolia biondii HOM05D000082 ORTHO05D000038 9.3e-07 58.9 109 28.4
Manes.13G043751 Manihot esculenta HOM05D000082 ORTHO05D000038 9.3e-07 58.9 83 37.3
Sabra07G0087500 Salix brachista HOM05D000082 ORTHO05D000038 9.3e-07 58.9 62 40.3
MBI11_g09452_MAGBIO Magnolia biondii HOM05D011607 ORTHO05D000038 1.2e-06 58.5 36 55.6
Nn4g24349 Nelumbo nucifera HOM05D000082 ORTHO05D000038 1.2e-06 58.5 56 42.9
RcHm_v2.0_Chr6g0259471 Rosa chinensis HOM05D000082 ORTHO05D029622 1.2e-06 58.5 34 58.8
THA.LOC104813318 Tarenaya hassleriana HOM05D000082 ORTHO05D000038 1.2e-06 58.5 35 62.9
FvH4_6g47060 Fragaria vesca HOM05D000082 ORTHO05D000038 1.6e-06 58.2 69 43.5
FAN14G3657 Fragaria x ananassa HOM05D006854 ORTHO05D000038 1.6e-06 58.2 69 42.0
Nitab4.5_0001151g0030 Nicotiana tabacum HOM05D000082 ORTHO05D000038 1.6e-06 58.2 65 43.1
QL10p017308 Quercus lobata HOM05D000082 ORTHO05D000038 1.6e-06 58.2 59 42.4
CiPaw.12G018100 Carya illinoinensis HOM05D000082 ORTHO05D000038 2.1e-06 57.8 60 41.7
Prupe.5G083100 Prunus persica HOM05D000082 ORTHO05D000038 2.1e-06 57.8 61 42.6
RcHm_v2.0_Chr7g0205221 Rosa chinensis HOM05D001778 ORTHO05D000038 2.1e-06 57.8 77 40.3
Aqoxy3G03344 Aquilegia oxysepala HOM05D000082 ORTHO05D000038 2.7e-06 57.4 65 41.5
Cfa000686 Carpinus fangiana HOM05D000082 ORTHO05D000038 2.7e-06 57.4 60 41.7
Nn5g27821 Nelumbo nucifera HOM05D000082 ORTHO05D000038 2.7e-06 57.4 68 38.2
Oeu045311.1 Olea europaea HOM05D000082 ORTHO05D000038 2.7e-06 57.4 64 40.6
QL04p075824 Quercus lobata HOM05D000082 ORTHO05D000038 2.7e-06 57.4 62 37.1
Dinv40416 Davidia involucrata HOM05D000082 ORTHO05D000038 3.5e-06 57.0 71 31.0
MD13G1076400 Malus domestica HOM05D000082 ORTHO05D000038 3.5e-06 57.0 36 52.8
QL10p017081 Quercus lobata HOM05D000082 ORTHO05D000038 3.5e-06 57.0 59 45.8
THA.LOC104809211 Tarenaya hassleriana HOM05D000082 ORTHO05D000038 3.5e-06 57.0 58 41.4
Aa31LG8G640 Aethionema arabicum HOM05D000082 ORTHO05D000038 4.6e-06 56.6 55 41.8
Ciclev10022101m.g Citrus clementina HOM05D000082 ORTHO05D000038 4.6e-06 56.6 55 41.8
COL.COLO4_33653 Corchorus olitorius HOM05D000082 ORTHO05D000038 4.6e-06 56.6 63 36.5
Dinv07230 Davidia involucrata HOM05D000082 ORTHO05D000038 4.6e-06 56.6 63 42.9
FvH4_5g04821 Fragaria vesca HOM05D006854 ORTHO05D022664 4.6e-06 56.6 73 39.7
FAN09G1374 Fragaria x ananassa HOM05D000082 ORTHO05D000038 4.6e-06 56.6 69 42.0
MBI18_g39300_MAGBIO Magnolia biondii HOM05D000082 ORTHO05D000038 4.6e-06 56.6 37 48.6
Potri.002G083001 Populus trichocarpa HOM05D000082 ORTHO05D000038 4.6e-06 56.6 60 45.0
ClCG08G005710 Citrullus lanatus HOM05D000082 ORTHO05D000038 6.0e-06 56.2 63 36.5
CsaV3_6G034420 Cucumis sativus L. HOM05D000082 ORTHO05D000038 6.0e-06 56.2 62 38.7
Dinv00634 Davidia involucrata HOM05D000082 ORTHO05D000038 6.0e-06 56.2 71 29.6
Dinv03540 Davidia involucrata HOM05D000082 ORTHO05D000038 6.0e-06 56.2 71 29.6
FAN14G4812 Fragaria x ananassa HOM05D000082 ORTHO05D000038 6.0e-06 56.2 69 42.0
Nitab4.5_0003667g0010 Nicotiana tabacum HOM05D000082 ORTHO05D000038 6.0e-06 56.2 65 41.5
Peaxi162Scf00013g01223 Petunia axillaris HOM05D000082 ORTHO05D000038 6.0e-06 56.2 46 47.8
RcHm_v2.0_Chr3g0484371 Rosa chinensis HOM05D009507 ORTHO05D000038 6.0e-06 56.2 49 46.9
RcHm_v2.0_Chr3g0484461 Rosa chinensis HOM05D009507 ORTHO05D000038 6.0e-06 56.2 49 46.9
CARHR045210 Cardamine hirsuta HOM05D000082 ORTHO05D000038 7.9e-06 55.8 86 36.0
MD08G1162100 Malus domestica HOM05D000082 ORTHO05D000038 7.9e-06 55.8 65 30.8
Prupe.5G189000 Prunus persica HOM05D000082 ORTHO05D000038 7.9e-06 55.8 51 39.2
RcHm_v2.0_Chr4g0384981 Rosa chinensis HOM05D000082 ORTHO05D000038 7.9e-06 55.8 38 52.6
Sed0022808 Sechium edule HOM05D000082 ORTHO05D000038 7.9e-06 55.8 75 32.0


User provided reference genes

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