Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G2417 Fragaria x ananassa HOM05D007179 ORTHO05D009124 2.0e-33 145.2 74 100.0
FAN22G0121 Fragaria x ananassa HOM05D007179 ORTHO05D009124 3.8e-32 141.0 74 97.3
FvH4_4g08570 Fragaria vesca HOM05D007179 ORTHO05D009124 4.2e-31 137.5 74 95.9
RcHm_v2.0_Chr4g0404651 Rosa chinensis HOM05D007179 ORTHO05D009124 4.6e-30 134.0 74 93.2
MD16G1263600 Malus domestica HOM05D007179 ORTHO05D009124 2.1e-27 125.2 72 86.1
CiPaw.07G187200 Carya illinoinensis HOM05D007179 ORTHO05D009124 5.3e-26 120.6 72 84.7
CANSAT11G0330 Cannabis sativa HOM05D007179 ORTHO05D009124 6.9e-26 120.2 72 84.7
MSTRG.26242 Avicennia marina HOM05D007179 ORTHO05D009124 3.4e-25 117.9 72 80.6
Nn1g04316 Nelumbo nucifera HOM05D007179 ORTHO05D009124 5.8e-25 117.1 71 81.7
Prupe.1G095600 Prunus persica HOM05D007179 ORTHO05D009124 5.8e-25 117.1 72 83.3
arahy.Tifrunner.gnm1.ann1.7FN6WP Arachis hypogaea HOM05D007179 ORTHO05D009124 7.6e-25 116.7 72 81.9
ClCG11G012230 Citrullus lanatus HOM05D007179 ORTHO05D009124 7.6e-25 116.7 72 80.6
Sed0008122 Sechium edule HOM05D007179 ORTHO05D009124 7.6e-25 116.7 72 79.2
TWI63G0613 Tripterygium wilfordii HOM05D007179 ORTHO05D009124 7.6e-25 116.7 72 80.6
MELO3C004033.2 Cucumis melo HOM05D007179 ORTHO05D009124 9.9e-25 116.3 72 79.2
PGR102G1777 Punica granatum HOM05D007179 ORTHO05D009124 9.9e-25 116.3 71 81.7
Atru.chr7.533 Acer truncatum HOM05D007179 ORTHO05D009124 1.7e-24 115.5 72 81.9
CiPaw.08G039500 Carya illinoinensis HOM05D007179 ORTHO05D009124 2.2e-24 115.2 72 80.6
CsaV3_2G008330 Cucumis sativus L. HOM05D007179 ORTHO05D009124 2.9e-24 114.8 72 77.8
Dinv41297 Davidia involucrata HOM05D007179 ORTHO05D009124 2.9e-24 114.8 72 79.2
arahy.Tifrunner.gnm1.ann1.8TJD28 Arachis hypogaea HOM05D007179 ORTHO05D009124 3.8e-24 114.4 72 79.2
VMungo1215G3157 Vigna mungo HOM05D007179 ORTHO05D009124 4.9e-24 114.0 72 81.9
Phvul.003G150500 Phaseolus vulgaris HOM05D007179 ORTHO05D009124 6.4e-24 113.6 72 81.9
Potri.006G175600 Populus trichocarpa HOM05D007179 ORTHO05D009124 6.4e-24 113.6 72 80.6
Glyma.17G067900 Glycine max HOM05D007179 ORTHO05D009124 1.1e-23 112.8 72 80.6
Oeu058831.1 Olea europaea HOM05D007179 ORTHO05D009124 1.1e-23 112.8 72 76.4
Thecc.09G162500 Theobroma cacao HOM05D007179 ORTHO05D009124 1.1e-23 112.8 72 80.6
vmacro13080 Vaccinium macrocarpon HOM05D007179 ORTHO05D009124 1.1e-23 112.8 72 80.6
Cpa.g.c29666.1 Carica papaya HOM05D007179 ORTHO05D009124 1.4e-23 112.5 72 75.0
Sabra06G0134300 Salix brachista HOM05D007179 ORTHO05D009124 1.4e-23 112.5 72 79.2
Lj4g0019685 Lotus japonicus HOM05D007179 ORTHO05D009124 1.9e-23 112.1 72 77.8
Eucgr.C02437 Eucalyptus grandis HOM05D007179 ORTHO05D009124 2.4e-23 111.7 72 76.4
Lalb_Chr13g0300481 Lupinus albus HOM05D007179 ORTHO05D009124 2.4e-23 111.7 72 76.4
MBI15_g26085_MAGBIO Magnolia biondii HOM05D007179 ORTHO05D009124 2.4e-23 111.7 71 77.5
CSS0047035 Camellia sinensis var. sinensis HOM05D007179 ORTHO05D009124 3.2e-23 111.3 72 79.2
Medtr4g129320 Medicago truncatula HOM05D007179 ORTHO05D009124 3.2e-23 111.3 72 79.2
Nitab4.5_0002004g0010 Nicotiana tabacum HOM05D007179 ORTHO05D009124 3.2e-23 111.3 72 79.2
Peaxi162Scf00457g00318 Petunia axillaris HOM05D007179 ORTHO05D009124 3.2e-23 111.3 71 77.5
TAR626G0641 Trochodendron aralioides HOM05D007179 ORTHO05D009124 3.2e-23 111.3 72 77.8
HanXRQChr05g0136491 Helianthus annuus HOM05D007179 ORTHO05D009124 5.4e-23 110.5 72 75.0
Nitab4.5_0011540g0010 Nicotiana tabacum HOM05D007179 ORTHO05D009124 5.4e-23 110.5 71 80.3
ECA236G0374 Erigeron canadensis HOM05D007179 ORTHO05D009124 7.1e-23 110.2 72 73.6
SalBow1G0390 Salvia bowleyana HOM05D007179 ORTHO05D009124 7.1e-23 110.2 68 80.9
GSVIVG01032307001 Vitis vinifera HOM05D007179 ORTHO05D009124 7.1e-23 110.2 72 76.4
Manes.06G029800 Manihot esculenta HOM05D007179 ORTHO05D009124 9.3e-23 109.8 70 81.4
Psat0s236g0160 Pisum sativum HOM05D007179 ORTHO05D009124 1.2e-22 109.4 72 75.0
Rhsim01G0010000 Rhododendron simsii HOM05D007179 ORTHO05D009124 1.2e-22 109.4 72 77.8
THA.LOC104811817 Tarenaya hassleriana HOM05D007179 ORTHO05D009124 1.2e-22 109.4 72 75.0
HPP92_018535 Vanilla planifolia HOM05D007179 ORTHO05D009124 1.6e-22 109.0 72 72.2
Lsat_1_v5_gn_8_65641 Lactuca sativa HOM05D007179 ORTHO05D009124 2.1e-22 108.6 72 72.2
Solyc07g006490.3 Solanum lycopersicum HOM05D007179 ORTHO05D009124 3.5e-22 107.8 71 77.5
PGSC0003DMG400027448 Solanum tuberosum HOM05D007179 ORTHO05D009124 4.6e-22 107.5 71 76.1
Cc06_g13840 Coffea canephora HOM05D007179 ORTHO05D009124 7.8e-22 106.7 71 76.1
Hund08993 Selenicereus undatus HOM05D007179 ORTHO05D009124 1.0e-21 106.3 72 73.6
Sopen07g002570 Solanum pennellii HOM05D007179 ORTHO05D009124 1.3e-21 105.9 71 76.1
Gohir.A05G006600 Gossypium hirsutum HOM05D007179 ORTHO05D009124 1.7e-21 105.5 72 79.2
ATR0580G253 Amborella trichopoda HOM05D007179 ORTHO05D009124 2.3e-21 105.1 70 74.3
AUR62040282 Chenopodium quinoa HOM05D007179 ORTHO05D009124 3.0e-21 104.8 71 74.6
Migut.K00269 Erythranthe guttata HOM05D007179 ORTHO05D009124 3.0e-21 104.8 72 76.4
THA.LOC104817810 Tarenaya hassleriana HOM05D007179 ORTHO05D009124 3.0e-21 104.8 72 69.4
AL7G24590 Arabidopsis lyrata HOM05D007179 ORTHO05D009124 3.9e-21 104.4 72 72.2
EL10Ac8g18859 Beta vulgaris HOM05D007179 ORTHO05D009124 8.7e-21 103.2 72 70.8
CDE05G2983 Ceratophyllum demersum HOM05D007179 ORTHO05D009124 8.7e-21 103.2 71 71.8
Gohir.D05G007500 Gossypium hirsutum HOM05D007179 ORTHO05D009124 8.7e-21 103.2 72 77.8
Gorai.009G007600 Gossypium raimondii HOM05D007179 ORTHO05D009124 8.7e-21 103.2 72 77.8
Aa31LG3G160 Aethionema arabicum HOM05D007179 ORTHO05D009124 1.1e-20 102.8 72 69.4
AT4G28025 Arabidopsis thaliana HOM05D007179 ORTHO05D009124 1.9e-20 102.1 71 71.8
C01p24450 Brassica napus HOM05D007179 ORTHO05D009124 1.9e-20 102.1 71 71.8
BolC1t02394H Brassica oleracea HOM05D007179 ORTHO05D009124 1.9e-20 102.1 71 71.8
BraA03t14832Z Brassica rapa HOM05D007179 ORTHO05D009124 1.9e-20 102.1 71 70.4
Sp7g25970 Schrenkiella parvula HOM05D007179 ORTHO05D009124 3.3e-20 101.3 72 69.4
C07p55870 Brassica napus HOM05D007179 ORTHO05D009124 4.3e-20 100.9 71 69.0
CARHR235720 Cardamine hirsuta HOM05D007179 ORTHO05D009124 4.3e-20 100.9 71 71.8
Thhalv10026434m.g Eutrema salsugineum HOM05D007179 ORTHO05D009124 4.3e-20 100.9 72 69.4
BolC7t46066H Brassica oleracea HOM05D007179 ORTHO05D009124 5.6e-20 100.5 71 69.0
CAN.G584.44 Capsicum annuum HOM05D007179 ORTHO05D009124 5.6e-20 100.5 68 77.9
PSO063G6628 Papaver somniferum HOM05D007179 ORTHO05D009124 5.6e-20 100.5 72 69.4
Aqoxy7G03201 Aquilegia oxysepala HOM05D007179 ORTHO05D009124 7.3e-20 100.1 70 70.0
A03p57660 Brassica napus HOM05D007179 ORTHO05D009124 7.3e-20 100.1 71 69.0
Carub.0007s1277 Capsella rubella HOM05D007179 ORTHO05D009124 7.3e-20 100.1 71 71.8
CDE02G2992 Ceratophyllum demersum HOM05D007179 ORTHO05D009124 7.3e-20 100.1 71 69.0
Lj9A729T43 Lonicera japonica HOM05D007179 ORTHO05D009124 7.3e-20 100.1 69 73.9
PSO782G3484 Papaver somniferum HOM05D007179 ORTHO05D009124 7.3e-20 100.1 72 69.4
BcaNung01603 Brassica carinata HOM05D007179 ORTHO05D009124 2.1e-19 98.6 71 69.0
COL.COLO4_16058 Corchorus olitorius HOM05D007179 ORTHO05D009124 2.8e-19 98.2 56 91.1
Ca_21187_v3 Cicer arietinum L. HOM05D000001 ORTHO05D009942 3.6e-19 97.8 63 79.4
Ciclev10009752m.g Citrus clementina HOM05D007179 ORTHO05D009124 3.6e-19 97.8 67 76.1
BraA01t01881Z Brassica rapa HOM05D007179 ORTHO05D009124 4.8e-19 97.4 71 67.6
BcaC06g32651 Brassica carinata HOM05D007179 ORTHO05D009124 6.2e-19 97.1 71 66.2
A01p19410 Brassica napus HOM05D007179 ORTHO05D009124 6.2e-19 97.1 71 66.2
AUR62039974 Chenopodium quinoa HOM05D007179 ORTHO05D009124 8.1e-19 96.7 84 63.1
DCAR_017946 Daucus carota HOM05D007179 ORTHO05D009124 8.1e-19 96.7 60 81.7
unitig_37.g12688 Utricularia gibba HOM05D007179 ORTHO05D009124 1.1e-18 96.3 73 68.5
Actinidia24032 Actinidia chinensis HOM05D007179 ORTHO05D009124 1.4e-18 95.9 60 80.0
Actinidia24777 Actinidia chinensis HOM05D007179 ORTHO05D009124 1.4e-18 95.9 60 80.0
Hund26395 Selenicereus undatus HOM05D007179 ORTHO05D009124 1.4e-18 95.9 56 85.7
Duzib150G1658 Durio zibethinus HOM05D007179 ORTHO05D009124 1.8e-18 95.5 54 88.9
Sc14g0001110 Simmondsia chinensis HOM05D007179 ORTHO05D009124 9.0e-18 93.2 56 83.9
AagrBONN_evm.TU.Sc2ySwM_362.2423 Anthoceros agrestis HOM05D007179 ORTHO05D009124 3.2e-15 84.7 70 57.1
SMO358G0032 Selaginella moellendorffii HOM05D007179 ORTHO05D009124 4.2e-15 84.3 63 63.5
Mapoly0124s0027 Marchantia polymorpha HOM05D007179 ORTHO05D009124 5.4e-15 84.0 70 58.6
Zm00001eb246810 Zea mays HOM05D007179 ORTHO05D009124 1.6e-14 82.4 56 75.0
SGA_v2.0_scaffold325G48698 Striga asiatica HOM05D007179 ORTHO05D009124 1.0e-13 79.7 66 65.2
Medtr4g129300 Medicago truncatula HOM05D007179 ORTHO05D009124 1.3e-13 79.3 53 73.6
Pp3c12_25950 Physcomitrium patens HOM05D007179 ORTHO05D009124 8.7e-13 76.6 70 50.0
BcaC09g50519 Brassica carinata HOM05D000147 ORTHO05D013131 1.9e-12 75.5 57 63.2
Haze_22155 Corylus avellana HOM05D007179 ORTHO05D009124 2.5e-12 75.1 47 76.6


User provided reference genes

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