Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G2353 Fragaria x ananassa HOM05D014495 ORTHO05D014615 1.5e-189 666.0 328 100.0
FAN22G2091 Fragaria x ananassa HOM05D014495 ORTHO05D014615 9.9e-85 317.8 285 62.1
FAN07G2945 Fragaria x ananassa HOM05D014495 ORTHO05D014615 3.7e-55 219.5 193 63.7
RcHm_v2.0_Chr4g0430571 Rosa chinensis HOM05D014495 ORTHO05D014615 7.9e-50 201.8 253 50.2
FAN12G2634 Fragaria x ananassa HOM05D027852 ORTHO05D014615 5.3e-38 162.5 226 50.0
FAN21G0355 Fragaria x ananassa HOM05D014495 ORTHO05D014615 3.6e-26 123.2 164 45.7
FAN07G1931 Fragaria x ananassa HOM05D014495 ORTHO05D014615 1.1e-22 111.7 102 59.8
FAN21G1016 Fragaria x ananassa HOM05D014495 ORTHO05D014615 2.7e-21 107.1 56 91.1
RcHm_v2.0_Chr6g0254481 Rosa chinensis HOM05D000151 ORTHO05D000074 8.6e-20 102.1 231 34.6
MD13G1117600 Malus domestica HOM05D000151 ORTHO05D000074 1.7e-15 87.8 249 32.1
FAN07G0554 Fragaria x ananassa HOM05D027852 ORTHO05D014615 3.7e-15 86.7 68 73.5
FAN22G0114 Fragaria x ananassa HOM05D000151 ORTHO05D000074 2.4e-14 84.0 231 30.3
Prupe.1G227500 Prunus persica HOM05D000151 ORTHO05D000074 2.4e-14 84.0 251 29.9
FvH4_4g05011 Fragaria vesca HOM05D000151 ORTHO05D000074 3.2e-14 83.6 229 28.4
RcHm_v2.0_Chr4g0395201 Rosa chinensis HOM05D000151 ORTHO05D000074 1.6e-13 81.3 257 29.2
Prupe.1G050400 Prunus persica HOM05D000151 ORTHO05D000074 7.8e-13 79.0 181 33.1
Prupe.6G285500 Prunus persica HOM05D000151 ORTHO05D000074 8.6e-12 75.5 303 27.7
FvH4_4g04480 Fragaria vesca HOM05D000151 ORTHO05D000074 1.1e-11 75.1 267 27.7
FAN12G2073 Fragaria x ananassa HOM05D004442 ORTHO05D002066 5.6e-11 72.8 266 27.8
FAN17G0644 Fragaria x ananassa HOM05D014495 ORTHO05D201024 7.3e-11 72.4 47 80.9
FAN22G0511 Fragaria x ananassa HOM05D022879 ORTHO05D000074 7.3e-11 72.4 227 29.1
RcHm_v2.0_Chr6g0254461 Rosa chinensis HOM05D000151 ORTHO05D000074 7.3e-11 72.4 239 27.6
QL05p064445 Quercus lobata HOM05D000151 ORTHO05D000074 1.2e-10 71.6 173 31.8
MD13G1223500 Malus domestica HOM05D000151 ORTHO05D000074 4.7e-10 69.7 165 35.2
FvH4_3g43771 Fragaria vesca HOM05D022879 ORTHO05D000074 8.0e-10 68.9 242 28.5
Aqoxy5G01075 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.8e-09 67.8 252 25.8
FAN11G1382 Fragaria x ananassa HOM05D022879 ORTHO05D000074 6.8e-09 65.9 217 29.5
Prupe.1G228000 Prunus persica HOM05D000151 ORTHO05D000074 6.8e-09 65.9 248 29.0
RcHm_v2.0_Chr3g0452431 Rosa chinensis HOM05D000151 ORTHO05D000074 2.6e-08 63.9 108 40.7
SGA_v2.0_scaffold9G04671 Striga asiatica HOM05D007685 ORTHO05D009136 2.6e-08 63.9 87 37.9
FAN05G1169 Fragaria x ananassa HOM05D000151 ORTHO05D000074 5.8e-08 62.8 213 26.8
Dinv34063 Davidia involucrata HOM05D000151 ORTHO05D000074 7.5e-08 62.4 136 36.8
MBI18_g40419_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 7.5e-08 62.4 132 28.8
RcHm_v2.0_Chr1g0339581 Rosa chinensis HOM05D000151 ORTHO05D000074 7.5e-08 62.4 64 53.1
RcHm_v2.0_Chr4g0395901 Rosa chinensis HOM05D026880 ORTHO05D029589 7.5e-08 62.4 161 34.8
FvH4_7g10560 Fragaria vesca HOM05D000151 ORTHO05D000074 9.8e-08 62.0 61 54.1
FAN16G2275 Fragaria x ananassa HOM05D019358 ORTHO05D000074 2.2e-07 60.8 204 30.9
MBI18_g45941_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 2.2e-07 60.8 132 28.8
TWI09G1230 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 2.2e-07 60.8 266 26.3
FAN12G3589 Fragaria x ananassa HOM05D000151 ORTHO05D000074 2.9e-07 60.5 66 50.0
MBI18_g19079_MAGBIO Magnolia biondii HOM05D001716 ORTHO05D004234 2.9e-07 60.5 131 29.0
MD16G1228400 Malus domestica HOM05D000151 ORTHO05D000074 2.9e-07 60.5 100 39.0
TAR626G0415 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.9e-07 60.5 253 24.9
FAN22G1568 Fragaria x ananassa HOM05D026880 ORTHO05D029589 3.7e-07 60.1 168 29.8
FAN03G1000 Fragaria x ananassa HOM05D022494 ORTHO05D000074 6.4e-07 59.3 61 52.5
FAN22G1059 Fragaria x ananassa HOM05D000151 ORTHO05D000074 6.4e-07 59.3 100 39.0
Aqoxy2G03786 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 8.3e-07 58.9 72 44.4
Prupe.1G228100 Prunus persica HOM05D000151 ORTHO05D000074 8.3e-07 58.9 233 27.9
SGA_v2.0_scaffold1514G53974 Striga asiatica HOM05D007685 ORTHO05D009136 8.3e-07 58.9 87 36.8
SGA_v2.0_scaffold405G51033 Striga asiatica HOM05D007685 ORTHO05D009136 8.3e-07 58.9 87 36.8
SGA_v2.0_scaffold405G51038 Striga asiatica HOM05D007685 ORTHO05D009136 8.3e-07 58.9 87 36.8
FAN14G1586 Fragaria x ananassa HOM05D000151 ORTHO05D000074 1.9e-06 57.8 69 44.9
SGA_v2.0_scaffold359G49862 Striga asiatica HOM05D007685 ORTHO05D009136 1.9e-06 57.8 87 35.6
FvH4_4g26320 Fragaria vesca HOM05D000151 ORTHO05D000074 3.2e-06 57.0 99 36.4
TAR525G0003 Trochodendron aralioides HOM05D000151 ORTHO05D000074 3.2e-06 57.0 261 25.7
Aqoxy7G03456 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 4.1e-06 56.6 233 25.8
FAN11G0983 Fragaria x ananassa HOM05D019358 ORTHO05D000074 4.1e-06 56.6 95 42.1
TAR628G1200 Trochodendron aralioides HOM05D000151 ORTHO05D000074 4.1e-06 56.6 262 26.0
Dinv03057 Davidia involucrata HOM05D014495 ORTHO05D014615 9.2e-06 55.5 85 41.2
FvH4_3g40651 Fragaria vesca HOM05D019358 ORTHO05D000074 9.2e-06 55.5 208 30.3
SGA_v2.0_scaffold218G42504 Striga asiatica HOM05D007685 ORTHO05D009136 9.2e-06 55.5 86 36.0
SGA_v2.0_scaffold52G19053 Striga asiatica HOM05D007685 ORTHO05D009136 9.2e-06 55.5 66 40.9


User provided reference genes

Program Settings