Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G2308 Fragaria x ananassa HOM05D006961 ORTHO05D008809 1.3e-100 369.8 190 100.0
FAN22G0366 Fragaria x ananassa HOM05D006961 ORTHO05D008809 4.1e-99 364.8 190 98.9
FAN07G0372 Fragaria x ananassa HOM05D006961 ORTHO05D008809 9.1e-99 363.6 190 98.9
RcHm_v2.0_Chr4g0438851 Rosa chinensis HOM05D006961 ORTHO05D008809 3.3e-88 328.6 190 89.5
FvH4_4g30480 Fragaria vesca HOM05D006961 ORTHO05D008809 1.3e-81 306.6 159 97.5
Prupe.1G282200 Prunus persica HOM05D006961 ORTHO05D008809 7.8e-66 254.2 192 73.4
MD16G1064700 Malus domestica HOM05D006961 ORTHO05D008809 1.8e-54 216.5 193 64.2
Haze_11979 Corylus avellana HOM05D006961 ORTHO05D004702 3.2e-51 205.7 190 60.5
CiPaw.06G090400 Carya illinoinensis HOM05D006961 ORTHO05D008809 6.0e-50 201.4 188 59.6
CANSAT64G0471 Cannabis sativa HOM05D006961 ORTHO05D008809 7.9e-50 201.1 196 59.2
Medtr5g043580 Medicago truncatula HOM05D006961 ORTHO05D008809 6.6e-49 198.0 167 62.3
Hma1.2p1_0357F.1_g134450 Hydrangea macrophylla HOM05D006961 ORTHO05D008809 1.1e-48 197.2 204 55.4
QL03p070935 Quercus lobata HOM05D006961 ORTHO05D008809 1.1e-48 197.2 190 56.8
Eucgr.G02462 Eucalyptus grandis HOM05D006961 ORTHO05D008809 1.5e-48 196.8 129 72.1
MD13G1065900 Malus domestica HOM05D006961 ORTHO05D008809 1.5e-48 196.8 178 61.8
Atru.chr11.1688 Acer truncatum HOM05D006961 ORTHO05D008809 2.5e-48 196.1 187 59.4
Glyma.02G113800 Glycine max HOM05D006961 ORTHO05D008809 3.3e-48 195.7 180 58.3
PSO478G0730 Papaver somniferum HOM05D006961 ORTHO05D008809 3.3e-48 195.7 188 58.5
PSO017G3353 Papaver somniferum HOM05D006961 ORTHO05D008809 4.3e-48 195.3 188 58.5
TPR.G24476 Trifolium pratense HOM05D006961 ORTHO05D008809 4.3e-48 195.3 128 71.1
Actinidia19920 Actinidia chinensis HOM05D006961 ORTHO05D008809 7.3e-48 194.5 163 63.8
Cfa008905 Carpinus fangiana HOM05D006961 ORTHO05D008809 1.6e-47 193.4 195 56.4
CsaV3_5G025620 Cucumis sativus L. HOM05D006961 ORTHO05D008809 2.1e-47 193.0 191 55.5
TWI75G1056 Tripterygium wilfordii HOM05D006961 ORTHO05D008809 2.1e-47 193.0 190 57.9
ClCG09G020750 Citrullus lanatus HOM05D006961 ORTHO05D008809 2.8e-47 192.6 189 54.5
Dinv34116 Davidia involucrata HOM05D006961 ORTHO05D008809 2.8e-47 192.6 198 56.1
Ca_04910_v3 Cicer arietinum L. HOM05D006961 ORTHO05D008809 1.4e-46 190.3 188 55.9
Lalb_Chr17g0341001 Lupinus albus HOM05D006961 ORTHO05D008809 1.4e-46 190.3 136 68.4
Peaxi162Scf00314g00025 Petunia axillaris HOM05D006961 ORTHO05D008809 3.1e-46 189.1 138 68.8
PGR119G1669 Punica granatum HOM05D006961 ORTHO05D008809 6.9e-46 188.0 145 64.1
Hund05862 Selenicereus undatus HOM05D006961 ORTHO05D008809 6.9e-46 188.0 186 57.0
SGA_v2.0_scaffold16G07754 Striga asiatica HOM05D006961 ORTHO05D008809 6.9e-46 188.0 192 54.2
MSTRG.7764 Avicennia marina HOM05D006961 ORTHO05D008809 9.0e-46 187.6 141 64.5
MELO3C002920.2 Cucumis melo HOM05D006961 ORTHO05D008809 9.0e-46 187.6 188 53.7
GSVIVG01012179001 Vitis vinifera HOM05D006961 ORTHO05D008809 9.0e-46 187.6 187 54.5
arahy.Tifrunner.gnm1.ann1.T2VQ83 Arachis hypogaea HOM05D006961 ORTHO05D008809 1.2e-45 187.2 164 59.8
arahy.Tifrunner.gnm1.ann1.TP0XC6 Arachis hypogaea HOM05D006961 ORTHO05D008809 1.2e-45 187.2 164 59.8
Lj2g0005939 Lotus japonicus HOM05D006961 ORTHO05D008809 1.5e-45 186.8 124 70.2
SalBow2G3426 Salvia bowleyana HOM05D006961 ORTHO05D008809 1.5e-45 186.8 190 54.7
VMungo1215G1627 Vigna mungo HOM05D006961 ORTHO05D008809 1.5e-45 186.8 190 55.8
Psat2g128160 Pisum sativum HOM05D006961 ORTHO05D008809 2.0e-45 186.4 137 65.7
CSS0004568 Camellia sinensis var. sinensis HOM05D006961 ORTHO05D008809 4.5e-45 185.3 204 55.4
TAR622G0866 Trochodendron aralioides HOM05D006961 ORTHO05D008809 4.5e-45 185.3 188 55.9
Glyma.01G055400 Glycine max HOM05D006961 ORTHO05D008809 7.6e-45 184.5 181 55.2
Solyc05g012600.3 Solanum lycopersicum HOM05D006961 ORTHO05D008809 7.6e-45 184.5 125 71.2
Sopen05g007430 Solanum pennellii HOM05D006961 ORTHO05D008809 7.6e-45 184.5 125 71.2
vmacro01328 Vaccinium macrocarpon HOM05D006961 ORTHO05D008809 1.3e-44 183.7 159 61.0
Carub.0005s0238 Capsella rubella HOM05D006961 ORTHO05D008809 1.7e-44 183.3 148 64.2
AL5G13170 Arabidopsis lyrata HOM05D006961 ORTHO05D008809 2.9e-44 182.6 148 62.8
PGSC0003DMG400028327 Solanum tuberosum HOM05D006961 ORTHO05D008809 2.9e-44 182.6 125 68.8
AUR62003136 Chenopodium quinoa HOM05D006961 ORTHO05D008809 3.8e-44 182.2 191 53.9
Nitab4.5_0000334g0230 Nicotiana tabacum HOM05D006961 ORTHO05D008809 3.8e-44 182.2 126 69.0
Sp2g14330 Schrenkiella parvula HOM05D006961 ORTHO05D008809 3.8e-44 182.2 173 56.6
Ciclev10032810m.g Citrus clementina HOM05D006961 ORTHO05D008809 4.9e-44 181.8 179 56.4
Aa31LG2G7160 Aethionema arabicum HOM05D006961 ORTHO05D008809 6.4e-44 181.4 164 57.9
unitig_22.g6499 Utricularia gibba HOM05D006961 ORTHO05D008809 6.4e-44 181.4 135 66.7
CAN.G1340.11 Capsicum annuum HOM05D006961 ORTHO05D008809 8.4e-44 181.0 123 68.3
DCAR_027451 Daucus carota HOM05D006961 ORTHO05D008809 8.4e-44 181.0 202 51.0
Gohir.D05G306100 Gossypium hirsutum HOM05D006961 ORTHO05D008809 8.4e-44 181.0 162 59.3
Migut.L01221 Erythranthe guttata HOM05D006961 ORTHO05D008809 1.1e-43 180.6 124 66.1
Potri.010G161400 Populus trichocarpa HOM05D006961 ORTHO05D008809 1.1e-43 180.6 128 65.6
AT2G03420 Arabidopsis thaliana HOM05D006961 ORTHO05D008809 1.4e-43 180.3 125 70.4
Nn3g17372 Nelumbo nucifera HOM05D006961 ORTHO05D008809 1.4e-43 180.3 190 53.2
COL.COLO4_27931 Corchorus olitorius HOM05D006961 ORTHO05D008809 1.9e-43 179.9 145 62.8
THA.LOC104824066 Tarenaya hassleriana HOM05D006961 ORTHO05D008809 1.9e-43 179.9 144 64.6
Thhalv10005024m.g Eutrema salsugineum HOM05D006961 ORTHO05D008809 2.4e-43 179.5 125 70.4
Sed0005182 Sechium edule HOM05D006961 ORTHO05D008809 3.2e-43 179.1 189 56.1
Aqoxy3G00448 Aquilegia oxysepala HOM05D006961 ORTHO05D008809 4.2e-43 178.7 193 53.9
Ah.03g139190 Amaranthus hybridus HOM05D006961 ORTHO05D008809 7.1e-43 177.9 128 68.8
AUR62007955 Chenopodium quinoa HOM05D006961 ORTHO05D008809 7.1e-43 177.9 191 51.3
Gohir.A05G306100 Gossypium hirsutum HOM05D006961 ORTHO05D008809 9.3e-43 177.6 163 58.3
CARHR145760 Cardamine hirsuta HOM05D006961 ORTHO05D008809 1.6e-42 176.8 160 56.2
Manes.05G107700 Manihot esculenta HOM05D006961 ORTHO05D008809 1.6e-42 176.8 136 64.0
ECA234G0986 Erigeron canadensis HOM05D006961 ORTHO05D008809 3.5e-42 175.6 151 60.3
Duzib268G0330 Durio zibethinus HOM05D006961 ORTHO05D008809 6.0e-42 174.9 125 65.6
Thecc.02G336300 Theobroma cacao HOM05D006961 ORTHO05D008809 6.0e-42 174.9 154 59.1
Cc11_g12360 Coffea canephora HOM05D006961 ORTHO05D008809 1.3e-41 173.7 125 64.8
EL10Ac6g14957 Beta vulgaris HOM05D006961 ORTHO05D008809 1.8e-41 173.3 129 65.1
Lj3A1032T68 Lonicera japonica HOM05D006961 ORTHO05D008809 2.3e-41 172.9 120 69.2
Rhsim12G0076500 Rhododendron simsii HOM05D006961 ORTHO05D008809 2.3e-41 172.9 137 62.0
BcaB07g30670 Brassica carinata HOM05D006961 ORTHO05D008809 3.0e-41 172.6 137 61.3
BcaC04g21488 Brassica carinata HOM05D006961 ORTHO05D008809 5.1e-41 171.8 125 65.6
A09p24430 Brassica napus HOM05D006961 ORTHO05D008809 5.1e-41 171.8 125 65.6
C09p31220 Brassica napus HOM05D006961 ORTHO05D008809 5.1e-41 171.8 125 65.6
BolC9t55978H Brassica oleracea HOM05D006961 ORTHO05D008809 5.1e-41 171.8 125 65.6
BraA09t38036Z Brassica rapa HOM05D006961 ORTHO05D008809 5.1e-41 171.8 125 65.6
HanXRQChr12g0379241 Helianthus annuus HOM05D006961 ORTHO05D008809 8.7e-41 171.0 151 58.3
MBI16_g15564_MAGBIO Magnolia biondii HOM05D006961 ORTHO05D008809 8.7e-41 171.0 169 56.2
Lsat_1_v5_gn_4_10260 Lactuca sativa HOM05D006961 ORTHO05D008809 1.9e-40 169.9 151 57.6
Oeu015341.2 Olea europaea HOM05D006961 ORTHO05D008809 3.3e-40 169.1 108 71.3
A02p33440 Brassica napus HOM05D006961 ORTHO05D008809 4.3e-40 168.7 149 59.1
Cpa.g.sc1.93 Carica papaya HOM05D006961 ORTHO05D008809 2.8e-39 166.0 143 60.1
ATR0111G017 Amborella trichopoda HOM05D006961 ORTHO05D008809 2.4e-38 162.9 154 51.9
HPP92_023640 Vanilla planifolia HOM05D006961 ORTHO05D008809 3.1e-38 162.5 121 65.3
CDE07G0364 Ceratophyllum demersum HOM05D006961 ORTHO05D008809 5.3e-38 161.8 124 64.5
Zm00001eb400470 Zea mays HOM05D006961 ORTHO05D008809 2.6e-37 159.5 122 62.3
Sc04g0007750 Simmondsia chinensis HOM05D006961 ORTHO05D008809 1.4e-35 153.7 103 66.0
CDE04G0363 Ceratophyllum demersum HOM05D006961 ORTHO05D008809 2.5e-35 152.9 118 63.6
SEGI_13566 Sequoiadendron giganteum HOM05D006961 ORTHO05D008809 1.2e-34 150.6 150 54.7
HPP92_023624 Vanilla planifolia HOM05D006961 ORTHO05D008809 6.9e-30 134.8 99 65.7
BcaC03g17213 Brassica carinata HOM05D006961 ORTHO05D008809 2.0e-29 133.3 118 61.0
C02p51430 Brassica napus HOM05D006961 ORTHO05D008809 2.0e-29 133.3 118 61.0
BolC2t11231H Brassica oleracea HOM05D006961 ORTHO05D008809 2.0e-29 133.3 118 61.0
Mapoly0047s0086 Marchantia polymorpha HOM05D006961 ORTHO05D008809 1.3e-25 120.6 167 43.7
Zm00001eb176890 Zea mays HOM05D006961 ORTHO05D008809 3.7e-23 112.5 80 67.5
Pp3c5_22460 Physcomitrium patens HOM05D006961 ORTHO05D008809 1.1e-22 110.9 127 45.7
Actinidia31945 Actinidia chinensis HOM05D006961 ORTHO05D008809 1.5e-21 107.1 120 54.2
Gorai.009G326100 Gossypium raimondii HOM05D006961 ORTHO05D008809 5.9e-21 105.1 100 61.0
AagrBONN_evm.TU.Sc2ySwM_228.3757 Anthoceros agrestis HOM05D006961 ORTHO05D008809 7.7e-21 104.8 123 47.2
FAN12G0580 Fragaria x ananassa HOM05D006961 ORTHO05D008809 1.7e-20 103.6 52 92.3
SMO356G0726 Selaginella moellendorffii HOM05D006961 ORTHO05D008809 1.0e-17 94.4 104 45.2
CBR_g50745 Chara braunii HOM05D006961 ORTHO05D008809 1.1e-16 90.9 156 37.8
SalBow2G3119 Salvia bowleyana HOM05D006961 ORTHO05D008809 1.5e-16 90.5 70 65.7
Cre02.g114450 Chlamydomonas reinhardtii HOM05D006961 ORTHO05D008809 7.4e-08 61.6 147 32.7
Os03g0210700 Oryza sativa ssp. japonica HOM05D006961 ORTHO05D008809 3.1e-06 56.2 81 39.5


User provided reference genes

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