Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G2269 Fragaria x ananassa HOM05D006260 ORTHO05D007860 5.1e-79 297.7 156 100.0
FAN22G1136 Fragaria x ananassa HOM05D006260 ORTHO05D007860 7.3e-78 293.9 155 98.1
FAN07G2370 Fragaria x ananassa HOM05D006260 ORTHO05D007860 2.1e-77 292.4 155 97.4
FAN12G1915 Fragaria x ananassa HOM05D006260 ORTHO05D007860 2.8e-77 292.0 155 97.4
FvH4_4g06900 Fragaria vesca HOM05D006260 ORTHO05D007860 1.1e-76 290.0 155 96.8
RcHm_v2.0_Chr4g0398801 Rosa chinensis HOM05D006260 ORTHO05D007860 4.3e-70 268.1 155 91.6
ClCG06G013810 Citrullus lanatus HOM05D006260 ORTHO05D007860 6.6e-63 244.2 155 83.2
Sed0022699 Sechium edule HOM05D006260 ORTHO05D007860 6.6e-63 244.2 155 81.9
MD16G1244900 Malus domestica HOM05D006260 ORTHO05D007860 8.7e-63 243.8 155 83.2
MD16G1245000 Malus domestica HOM05D006260 ORTHO05D007860 1.9e-62 242.7 155 83.2
MELO3C017413.2 Cucumis melo HOM05D006260 ORTHO05D007860 4.3e-62 241.5 155 81.3
CsaV3_1G032030 Cucumis sativus L. HOM05D006260 ORTHO05D007860 1.3e-61 240.0 155 80.6
Prupe.1G072000 Prunus persica HOM05D006260 ORTHO05D007860 1.3e-61 240.0 155 81.9
Ciclev10009690m.g Citrus clementina HOM05D006260 ORTHO05D007860 2.4e-60 235.7 155 78.7
Atru.chr7.896 Acer truncatum HOM05D006260 ORTHO05D007860 4.0e-60 235.0 155 79.4
TAR383G0359 Trochodendron aralioides HOM05D006260 ORTHO05D007860 6.9e-60 234.2 155 80.6
TWI63G0540 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 9.0e-60 233.8 155 79.4
CANSAT11G1813 Cannabis sativa HOM05D006260 ORTHO05D007860 1.2e-59 233.4 155 81.9
CiPaw.07G199300 Carya illinoinensis HOM05D006260 ORTHO05D007860 1.2e-59 233.4 134 88.1
Manes.06G017400 Manihot esculenta HOM05D006260 ORTHO05D007860 1.2e-59 233.4 137 86.1
Migut.J00776 Erythranthe guttata HOM05D006260 ORTHO05D007860 3.4e-59 231.9 148 77.7
Lj5A659T18 Lonicera japonica HOM05D006260 ORTHO05D007860 3.4e-59 231.9 155 78.7
Oeu043898.1 Olea europaea HOM05D006260 ORTHO05D007860 4.5e-59 231.5 157 79.0
Potri.018G139600 Populus trichocarpa HOM05D006260 ORTHO05D007860 7.6e-59 230.7 155 78.7
Manes.14G161300 Manihot esculenta HOM05D006260 ORTHO05D007860 9.9e-59 230.3 137 83.9
Haze_22050 Corylus avellana HOM05D006260 ORTHO05D007860 1.3e-58 229.9 153 79.7
TWI38G0675 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 1.7e-58 229.6 155 76.8
MBI14_g10729_MAGBIO Magnolia biondii HOM05D006260 ORTHO05D007860 2.2e-58 229.2 155 76.8
CANSAT21G0469 Cannabis sativa HOM05D006260 ORTHO05D007860 2.9e-58 228.8 155 80.0
Eucgr.C00083 Eucalyptus grandis HOM05D006260 ORTHO05D007860 2.9e-58 228.8 155 78.1
SGA_v2.0_scaffold31G12783 Striga asiatica HOM05D006260 ORTHO05D007860 2.9e-58 228.8 143 80.4
Hma1.2p1_0478F.1_g161140 Hydrangea macrophylla HOM05D006260 ORTHO05D007860 4.9e-58 228.0 155 77.4
Cc05_g06400 Coffea canephora HOM05D006260 ORTHO05D007860 6.4e-58 227.6 155 75.5
COL.COLO4_14462 Corchorus olitorius HOM05D006260 ORTHO05D007860 6.4e-58 227.6 156 77.6
Aa31LG2G20680 Aethionema arabicum HOM05D006260 ORTHO05D007860 8.4e-58 227.3 156 74.4
AL7G22380 Arabidopsis lyrata HOM05D006260 ORTHO05D007860 8.4e-58 227.3 155 76.1
Carub.0004s1476 Capsella rubella HOM05D006260 ORTHO05D007860 8.4e-58 227.3 157 74.5
CiPaw.08G031300 Carya illinoinensis HOM05D006260 ORTHO05D007860 8.4e-58 227.3 153 78.4
Thhalv10026375m.g Eutrema salsugineum HOM05D006260 ORTHO05D007860 8.4e-58 227.3 156 75.6
Gohir.A05G409000 Gossypium hirsutum HOM05D006260 ORTHO05D007860 8.4e-58 227.3 155 76.1
Lj5A667T13 Lonicera japonica HOM05D006260 ORTHO05D007860 8.4e-58 227.3 155 78.7
Oeu012389.1 Olea europaea HOM05D006260 ORTHO05D007860 8.4e-58 227.3 158 77.2
Thecc.09G192000 Theobroma cacao HOM05D006260 ORTHO05D007860 8.4e-58 227.3 155 76.8
AT4G29870 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 1.1e-57 226.9 155 73.5
MSTRG.19359 Avicennia marina HOM05D006260 ORTHO05D007860 1.1e-57 226.9 147 80.3
Gohir.D04G006400 Gossypium hirsutum HOM05D006260 ORTHO05D007860 1.1e-57 226.9 155 76.1
Gorai.012G007800 Gossypium raimondii HOM05D006260 ORTHO05D007860 1.1e-57 226.9 155 76.1
Lalb_Chr23g0276701 Lupinus albus HOM05D006260 ORTHO05D007860 1.1e-57 226.9 155 75.5
unitig_8.g4053 Utricularia gibba HOM05D006260 ORTHO05D007860 1.4e-57 226.5 143 81.8
Potri.006G072600 Populus trichocarpa HOM05D006260 ORTHO05D007860 1.9e-57 226.1 155 78.1
PGR018G0003 Punica granatum HOM05D006260 ORTHO05D007860 1.9e-57 226.1 152 74.3
PGR142G0891 Punica granatum HOM05D006260 ORTHO05D007860 1.9e-57 226.1 152 74.3
PGR142G1877 Punica granatum HOM05D006260 ORTHO05D007860 1.9e-57 226.1 152 74.3
Sp7g27680 Schrenkiella parvula HOM05D006260 ORTHO05D007860 1.9e-57 226.1 156 75.6
Gohir.D04G006600 Gossypium hirsutum HOM05D006260 ORTHO05D007860 2.4e-57 225.7 155 76.1
Gorai.012G008000 Gossypium raimondii HOM05D006260 ORTHO05D007860 2.4e-57 225.7 155 76.1
Psat1g142480 Pisum sativum HOM05D006260 ORTHO05D007860 4.2e-57 224.9 155 72.9
GSVIVG01029271001 Vitis vinifera HOM05D006260 ORTHO05D007860 5.4e-57 224.6 155 76.1
CARHR237780 Cardamine hirsuta HOM05D006260 ORTHO05D007860 7.1e-57 224.2 156 75.0
Glyma.09G061600 Glycine max HOM05D006260 ORTHO05D007860 7.1e-57 224.2 138 84.1
Lj5A660T21 Lonicera japonica HOM05D006260 ORTHO05D007860 7.1e-57 224.2 155 78.7
Glyma.15G167900 Glycine max HOM05D006260 ORTHO05D007860 9.3e-57 223.8 137 84.7
Gohir.A05G408800 Gossypium hirsutum HOM05D006260 ORTHO05D007860 9.3e-57 223.8 155 75.5
Rhsim01G0114100 Rhododendron simsii HOM05D006260 ORTHO05D007860 9.3e-57 223.8 154 73.4
PGSC0003DMG400015598 Solanum tuberosum HOM05D006260 ORTHO05D007860 9.3e-57 223.8 155 75.5
SalBow3G0163 Salvia bowleyana HOM05D006260 ORTHO05D007860 1.2e-56 223.4 143 82.5
A03p59290 Brassica napus HOM05D006260 ORTHO05D007860 1.6e-56 223.0 156 72.4
A01p08290 Brassica napus HOM05D006260 ORTHO05D007860 2.1e-56 222.6 155 71.6
BraA01t00777Z Brassica rapa HOM05D006260 ORTHO05D007860 2.1e-56 222.6 155 71.6
Carub.0003s3356 Capsella rubella HOM05D006260 ORTHO05D007860 2.1e-56 222.6 155 72.3
C01p09330 Brassica napus HOM05D006260 ORTHO05D007860 2.7e-56 222.2 155 71.0
BolC1t00921H Brassica oleracea HOM05D006260 ORTHO05D007860 2.7e-56 222.2 155 71.0
BraA03t14986Z Brassica rapa HOM05D006260 ORTHO05D007860 2.7e-56 222.2 156 72.4
CAN.G1341.6 Capsicum annuum HOM05D006260 ORTHO05D007860 3.5e-56 221.9 155 74.8
Solyc05g006080.1 Solanum lycopersicum HOM05D006260 ORTHO05D007860 3.5e-56 221.9 155 74.2
Sopen05g002100 Solanum pennellii HOM05D006260 ORTHO05D007860 3.5e-56 221.9 155 74.2
CSS0028862 Camellia sinensis var. sinensis HOM05D006260 ORTHO05D007860 4.6e-56 221.5 155 71.0
C07p57300 Brassica napus HOM05D006260 ORTHO05D007860 6.0e-56 221.1 155 70.3
Nitab4.5_0000257g0210 Nicotiana tabacum HOM05D006260 ORTHO05D007860 1.0e-55 220.3 155 74.2
AT2G19340 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 1.3e-55 219.9 156 72.4
BolC7t46199H Brassica oleracea HOM05D006260 ORTHO05D007860 1.3e-55 219.9 156 71.8
Peaxi162Scf00421g00071 Petunia axillaris HOM05D006260 ORTHO05D007860 1.3e-55 219.9 155 76.1
Sc18g0003820 Simmondsia chinensis HOM05D006260 ORTHO05D007860 1.3e-55 219.9 155 73.5
vmacro20799 Vaccinium macrocarpon HOM05D006260 ORTHO05D007860 2.3e-55 219.2 155 71.6
Phvul.009G234400 Phaseolus vulgaris HOM05D006260 ORTHO05D007860 3.0e-55 218.8 134 81.3
CARHR109790 Cardamine hirsuta HOM05D006260 ORTHO05D007860 3.9e-55 218.4 155 71.6
QL02p064675 Quercus lobata HOM05D006260 ORTHO05D007860 6.7e-55 217.6 154 74.0
Sed0019929 Sechium edule HOM05D006260 ORTHO05D007860 6.7e-55 217.6 147 77.6
TPR.G2550 Trifolium pratense HOM05D006260 ORTHO05D007860 6.7e-55 217.6 155 71.6
Lj6g0019941 Lotus japonicus HOM05D006260 ORTHO05D007860 1.1e-54 216.9 155 73.5
Nitab4.5_0009368g0010 Nicotiana tabacum HOM05D006260 ORTHO05D007860 1.1e-54 216.9 155 72.9
Ah.14g085330 Amaranthus hybridus HOM05D006260 ORTHO05D007860 4.3e-54 214.9 155 71.6
CDE07G0891 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 4.3e-54 214.9 131 80.9
Lsat_1_v5_gn_7_55181 Lactuca sativa HOM05D006260 ORTHO05D007860 4.3e-54 214.9 130 82.3
CDE06G1002 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 5.6e-54 214.5 131 80.9
Medtr2g038390 Medicago truncatula HOM05D006260 ORTHO05D007860 2.1e-53 212.6 152 72.4
DCAR_018008 Daucus carota HOM05D006260 ORTHO05D007860 4.8e-53 211.5 129 82.9
Ah.09g228540 Amaranthus hybridus HOM05D006260 ORTHO05D007860 8.1e-53 210.7 155 69.7
SHI03067 Sapria himalayana HOM05D006260 ORTHO05D007860 8.1e-53 210.7 134 77.6
ATR0580G108 Amborella trichopoda HOM05D006260 ORTHO05D007860 6.9e-52 207.6 155 69.0
Ca_02129_v3 Cicer arietinum L. HOM05D006260 ORTHO05D007860 6.9e-52 207.6 130 78.5
HanXRQChr09g0245351 Helianthus annuus HOM05D006260 ORTHO05D007860 9.0e-52 207.2 130 80.0
SGA_v2.0_scaffold112G31634 Striga asiatica HOM05D006260 ORTHO05D007860 9.0e-52 207.2 135 79.3
Aqoxy7G02900 Aquilegia oxysepala HOM05D006260 ORTHO05D007860 7.6e-51 204.1 156 70.5
Zm00001eb112720 Zea mays HOM05D006260 ORTHO05D007860 1.3e-50 203.4 154 68.8
Zm00001eb169590 Zea mays HOM05D006260 ORTHO05D007860 8.4e-50 200.7 154 68.2
AUR62027428 Chenopodium quinoa HOM05D006260 ORTHO05D007860 1.9e-49 199.5 126 77.8
HPP92_027392 Vanilla planifolia HOM05D006260 ORTHO05D007860 4.2e-49 198.4 156 66.7
TAR626G1894 Trochodendron aralioides HOM05D006260 ORTHO05D007860 7.4e-46 187.6 110 89.1
Mapoly0039s0076 Marchantia polymorpha HOM05D006260 ORTHO05D007860 8.2e-45 184.1 129 72.9
Sabra18G0114100 Salix brachista HOM05D006260 ORTHO05D007860 6.5e-42 174.5 97 89.7
PSO170G1526 Papaver somniferum HOM05D006260 ORTHO05D007860 1.9e-41 172.9 108 78.7
Cpa.g.sc115.60 Carica papaya HOM05D006260 ORTHO05D007860 7.1e-41 171.0 97 88.7
SEGI_37789 Sequoiadendron giganteum HOM05D006260 ORTHO05D007860 3.5e-40 168.7 146 61.6
Sabra06G0054000 Salix brachista HOM05D006260 ORTHO05D007860 1.0e-39 167.2 97 85.6
CBR_g37526 Chara braunii HOM05D006260 ORTHO05D007860 2.3e-39 166.0 130 60.8
SMO329G0049 Selaginella moellendorffii HOM05D006260 ORTHO05D007860 2.3e-39 166.0 131 64.1
AagrBONN_evm.TU.Sc2ySwM_362.1716 Anthoceros agrestis HOM05D006260 ORTHO05D007860 1.4e-36 156.8 127 61.4
Pp3c5_8110 Physcomitrium patens HOM05D006260 ORTHO05D007860 3.1e-36 155.6 107 71.0
ECA240G0773 Erigeron canadensis HOM05D006260 ORTHO05D007860 9.0e-36 154.1 98 78.6
AUR62031268 Chenopodium quinoa HOM05D006260 ORTHO05D007860 1.0e-34 150.6 85 85.9
EL10Ac8g19294 Beta vulgaris HOM05D006260 ORTHO05D007860 7.2e-33 144.4 85 82.4
BcaNung00497 Brassica carinata HOM05D006260 ORTHO05D007860 2.1e-32 142.9 106 68.9
Lj5C609T1 Lonicera japonica HOM05D006260 ORTHO05D007860 1.2e-24 117.1 68 80.9
Cre12.g528150 Chlamydomonas reinhardtii HOM05D006260 ORTHO05D007860 1.0e-23 114.0 87 57.5
TWI39G0723 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 8.0e-16 87.8 106 52.8


User provided reference genes

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