Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G2161 Fragaria x ananassa HOM05D005061 ORTHO05D006001 4.2e-62 241.5 154 100.0
FvH4_4g13580 Fragaria vesca HOM05D005061 ORTHO05D006001 6.6e-55 217.6 153 84.3
FAN12G1864 Fragaria x ananassa HOM05D005061 ORTHO05D006001 6.6e-55 217.6 153 84.3
FAN07G1641 Fragaria x ananassa HOM05D005061 ORTHO05D006001 1.1e-54 216.9 133 94.7
FAN22G2287 Fragaria x ananassa HOM05D005061 ORTHO05D006001 4.7e-45 184.9 133 82.0
RcHm_v2.0_Chr4g0414331 Rosa chinensis HOM05D005061 ORTHO05D006001 1.3e-18 97.1 134 58.2
Prupe.1G159300 Prunus persica HOM05D005061 ORTHO05D006001 1.0e-15 87.4 163 46.0
RcHm_v2.0_Chr4g0414321 Rosa chinensis HOM05D005061 ORTHO05D006001 1.9e-14 83.2 164 44.5
MD14G1080700 Malus domestica HOM05D005061 ORTHO05D006001 9.6e-14 80.9 159 44.0
FAN17G0047 Fragaria x ananassa HOM05D005061 ORTHO05D006001 3.6e-13 79.0 149 45.0
Gohir.D10G140500 Gossypium hirsutum HOM05D005061 ORTHO05D006001 8.1e-13 77.8 154 40.3
Gorai.011G156100 Gossypium raimondii HOM05D005061 ORTHO05D006001 8.1e-13 77.8 154 40.3
MD12G1086100 Malus domestica HOM05D005061 ORTHO05D006001 1.4e-12 77.0 159 44.0
COL.COLO4_20183 Corchorus olitorius HOM05D005061 ORTHO05D006001 4.0e-12 75.5 145 39.3
FvH4_4g13570 Fragaria vesca HOM05D005061 ORTHO05D006001 1.2e-11 73.9 153 42.5
FAN07G0218 Fragaria x ananassa HOM05D005061 ORTHO05D006001 2.0e-11 73.2 153 42.5
Glyma.08G364400 Glycine max HOM05D005061 ORTHO05D006001 3.4e-11 72.4 154 41.6
TPR.G26387 Trifolium pratense HOM05D005061 ORTHO05D006001 5.8e-11 71.6 150 40.0
Lalb_Chr01g0000091 Lupinus albus HOM05D005061 ORTHO05D006001 7.6e-11 71.2 159 35.8
Psat6g003280 Pisum sativum HOM05D005061 ORTHO05D006001 7.6e-11 71.2 157 40.1
TPR.G1371 Trifolium pratense HOM05D005061 ORTHO05D006001 1.7e-10 70.1 150 40.0
Lj1g0014719 Lotus japonicus HOM05D005061 ORTHO05D006001 2.2e-10 69.7 154 38.3
Lj1g0023949 Lotus japonicus HOM05D005061 ORTHO05D006001 2.2e-10 69.7 154 38.3
FAN22G0582 Fragaria x ananassa HOM05D005061 ORTHO05D006001 3.8e-10 68.9 153 41.8
Medtr1g025570 Medicago truncatula HOM05D005061 ORTHO05D006001 4.9e-10 68.6 147 38.1
Cpa.g.sc170.49 Carica papaya HOM05D005061 ORTHO05D006001 1.1e-09 67.4 137 39.4
Glyma.18G297700 Glycine max HOM05D005061 ORTHO05D006001 4.2e-09 65.5 135 39.3
Gohir.A10G126200 Gossypium hirsutum HOM05D005061 ORTHO05D006001 4.2e-09 65.5 154 37.7
CANSAT78G0571 Cannabis sativa HOM05D005061 ORTHO05D006001 2.1e-08 63.2 169 39.1
TAR624G0493 Trochodendron aralioides HOM05D002455 ORTHO05D006001 2.1e-08 63.2 158 35.4
Aa31LG11G8230 Aethionema arabicum HOM05D005061 ORTHO05D006001 4.6e-08 62.0 131 37.4
Thhalv10004918m.g Eutrema salsugineum HOM05D005061 ORTHO05D006001 6.0e-08 61.6 148 36.5
AL8G22790 Arabidopsis lyrata HOM05D005061 ORTHO05D006001 7.9e-08 61.2 134 38.1
BcaNung02589 Brassica carinata HOM05D005061 ORTHO05D006001 7.9e-08 61.2 153 35.3
C07p39760 Brassica napus HOM05D005061 ORTHO05D006001 7.9e-08 61.2 153 35.3
BraA06t26765Z Brassica rapa HOM05D005061 ORTHO05D006001 1.0e-07 60.8 152 35.5
QL07p041720 Quercus lobata HOM05D005061 ORTHO05D006001 1.0e-07 60.8 170 40.0
Carub.0008s0903 Capsella rubella HOM05D005061 ORTHO05D006001 1.8e-07 60.1 135 38.5
Manes.02G208300 Manihot esculenta HOM05D005061 ORTHO05D006001 5.1e-07 58.5 161 35.4
PGR042G2541 Punica granatum HOM05D005061 ORTHO05D006001 5.1e-07 58.5 150 34.7
Cpa.g.sc150.53 Carica papaya HOM05D005061 ORTHO05D006001 6.7e-07 58.2 156 34.6
Atru.chr4.1292 Acer truncatum HOM05D005061 ORTHO05D006001 8.7e-07 57.8 131 40.5
A06p38500 Brassica napus HOM05D005061 ORTHO05D006001 1.1e-06 57.4 150 34.7
Hma1.2p1_0383F.1_g140630 Hydrangea macrophylla HOM05D005061 ORTHO05D006001 1.1e-06 57.4 154 35.7
Manes.10G081400 Manihot esculenta HOM05D005061 ORTHO05D006001 1.1e-06 57.4 161 34.8
BcaC06g30707 Brassica carinata HOM05D005061 ORTHO05D006001 1.5e-06 57.0 151 35.8
TAR636G2803 Trochodendron aralioides HOM05D005061 ORTHO05D006001 1.9e-06 56.6 149 33.6
AT5G49210 Arabidopsis thaliana HOM05D005061 ORTHO05D006001 2.5e-06 56.2 137 36.5
CARHR182460 Cardamine hirsuta HOM05D005061 ORTHO05D006001 2.5e-06 56.2 111 37.8
Psat3g206160 Pisum sativum HOM05D005061 ORTHO05D006001 2.5e-06 56.2 149 40.3
SalBow8G4870 Salvia bowleyana HOM05D005061 ORTHO05D006001 4.3e-06 55.5 135 36.3
BcaC03g17706 Brassica carinata HOM05D005061 ORTHO05D006001 9.6e-06 54.3 155 33.5
C02p57130 Brassica napus HOM05D005061 ORTHO05D006001 9.6e-06 54.3 155 33.5


User provided reference genes

Program Settings