Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G2097 Fragaria x ananassa HOM05D007389 ORTHO05D009400 7.7e-206 720.3 380 100.0
FvH4_4g27970 Fragaria vesca HOM05D007389 ORTHO05D009400 1.2e-198 696.4 380 95.8
RcHm_v2.0_Chr4g0435681 Rosa chinensis HOM05D007389 ORTHO05D009400 9.8e-185 650.2 382 89.3
FAN22G0259 Fragaria x ananassa HOM05D007389 ORTHO05D009400 2.7e-174 615.5 338 97.6
Prupe.1G306500 Prunus persica HOM05D007389 ORTHO05D009400 3.8e-152 542.0 381 73.2
MD13G1045500 Malus domestica HOM05D007389 ORTHO05D009400 6.6e-149 531.2 381 71.4
Cfa018619 Carpinus fangiana HOM05D007389 ORTHO05D009400 3.1e-146 522.3 380 70.3
GSVIVG01011940001 Vitis vinifera HOM05D007389 ORTHO05D009400 1.1e-140 503.8 379 66.8
CiPaw.15G004300 Carya illinoinensis HOM05D007389 ORTHO05D009400 9.6e-140 500.7 364 70.9
Ciclev10031830m.g Citrus clementina HOM05D007389 ORTHO05D009400 6.4e-136 488.0 381 65.1
Gohir.D12G172800 Gossypium hirsutum HOM05D007389 ORTHO05D009400 7.1e-135 484.6 380 64.2
Actinidia16624 Actinidia chinensis HOM05D007389 ORTHO05D009400 1.6e-134 483.4 380 65.0
Haze_17449 Corylus avellana HOM05D004993 ORTHO05D008532 2.1e-134 483.0 355 69.9
Gorai.008G185300 Gossypium raimondii HOM05D007389 ORTHO05D009400 3.5e-134 482.3 380 63.9
COL.COLO4_07880 Corchorus olitorius HOM05D007389 ORTHO05D009400 4.6e-134 481.9 373 65.7
Gohir.A12G169500 Gossypium hirsutum HOM05D007389 ORTHO05D009400 1.8e-133 479.9 380 63.9
Potri.010G128700 Populus trichocarpa HOM05D007389 ORTHO05D009400 3.9e-133 478.8 381 64.6
Thecc.02G359800 Theobroma cacao HOM05D007389 ORTHO05D009400 6.2e-131 471.5 380 63.4
Rhsim09G0111300 Rhododendron simsii HOM05D007389 ORTHO05D009400 9.9e-129 464.2 379 63.3
Hma1.2p1_0406F.1_g146090 Hydrangea macrophylla HOM05D007389 ORTHO05D009400 1.7e-128 463.4 377 64.2
Manes.06G071400 Manihot esculenta HOM05D007389 ORTHO05D009400 6.4e-128 461.5 379 61.7
Eucgr.B03042 Eucalyptus grandis HOM05D007389 ORTHO05D009400 1.4e-127 460.3 381 61.9
TWI31G0236 Tripterygium wilfordii HOM05D007389 ORTHO05D009400 1.4e-127 460.3 380 62.1
Sabra10G0097900 Salix brachista HOM05D007389 ORTHO05D009400 1.9e-127 459.9 381 61.9
CSS0047863 Camellia sinensis var. sinensis HOM05D007389 ORTHO05D009400 5.5e-127 458.4 365 64.4
TAR371G0503 Trochodendron aralioides HOM05D007389 ORTHO05D009400 2.1e-126 456.4 353 67.4
CSS0013871 Camellia sinensis var. sinensis HOM05D007389 ORTHO05D009400 6.7e-125 451.4 357 65.0
ClCG05G022970 Citrullus lanatus HOM05D007389 ORTHO05D009400 6.7e-125 451.4 380 61.1
Phvul.003G028200 Phaseolus vulgaris HOM05D007389 ORTHO05D009400 2.5e-124 449.5 381 60.4
HanXRQChr16g0529211 Helianthus annuus HOM05D007389 ORTHO05D009400 6.2e-123 444.9 379 60.2
Lalb_Chr10g0099831 Lupinus albus HOM05D007389 ORTHO05D009400 6.2e-123 444.9 378 60.3
CsaV3_5G034040 Cucumis sativus L. HOM05D007389 ORTHO05D009400 4.0e-122 442.2 380 59.7
PGR102G2947 Punica granatum HOM05D007389 ORTHO05D009400 1.2e-121 440.7 381 59.1
vmacro10536 Vaccinium macrocarpon HOM05D007389 ORTHO05D009400 5.8e-121 438.3 366 62.8
Nn4g23752 Nelumbo nucifera HOM05D007389 ORTHO05D009400 1.3e-117 427.2 365 59.7
Nitab4.5_0014175g0010 Nicotiana tabacum HOM05D007389 ORTHO05D009400 1.3e-117 427.2 380 56.1
ECA234G1470 Erigeron canadensis HOM05D007389 ORTHO05D009400 3.9e-117 425.6 379 57.0
Cc11_g10500 Coffea canephora HOM05D007389 ORTHO05D009400 7.4e-116 421.4 378 57.1
Sed0014526 Sechium edule HOM05D007389 ORTHO05D009400 7.4e-116 421.4 379 56.7
Glyma.02G098600 Glycine max HOM05D007389 ORTHO05D009400 4.8e-115 418.7 380 57.4
Duzib268G0586 Durio zibethinus HOM05D007389 ORTHO05D009400 3.1e-114 416.0 320 64.4
Lsat_1_v5_gn_4_20121 Lactuca sativa HOM05D007389 ORTHO05D009400 6.9e-114 414.8 382 56.0
SEGI_35624 Sequoiadendron giganteum HOM05D007389 ORTHO05D009400 1.2e-113 414.1 380 55.0
Sc11g0003170 Simmondsia chinensis HOM05D007389 ORTHO05D009400 3.4e-113 412.5 380 56.3
PGSC0003DMG400007468 Solanum tuberosum HOM05D007389 ORTHO05D009400 3.4e-113 412.5 380 55.5
Nn3g17765 Nelumbo nucifera HOM05D007389 ORTHO05D009400 2.2e-112 409.8 379 56.5
Sopen04g002110 Solanum pennellii HOM05D007389 ORTHO05D009400 1.4e-111 407.1 380 55.3
Lj2g0025946 Lotus japonicus HOM05D007389 ORTHO05D009400 3.2e-111 406.0 384 57.0
Nitab4.5_0000280g0020 Nicotiana tabacum HOM05D007389 ORTHO05D009400 1.2e-110 404.1 380 54.2
VMungo1215G1613 Vigna mungo HOM05D007389 ORTHO05D009400 3.3e-108 396.0 358 57.8
MELO3C012220.2 Cucumis melo HOM05D007389 ORTHO05D009400 5.7e-108 395.2 368 57.3
SalBow8G0691 Salvia bowleyana HOM05D007389 ORTHO05D009400 2.8e-107 392.9 382 53.4
Peaxi162Scf00086g00615 Petunia axillaris HOM05D007389 ORTHO05D009400 1.4e-106 390.6 381 53.3
ATR0681G192 Amborella trichopoda HOM05D007389 ORTHO05D009400 4.1e-106 389.0 365 53.7
Hund25095 Selenicereus undatus HOM05D007389 ORTHO05D009400 2.1e-102 376.7 378 51.1
Migut.E00312 Erythranthe guttata HOM05D007389 ORTHO05D009400 2.7e-102 376.3 380 52.1
Pp3c18_11800 Physcomitrium patens HOM05D007389 ORTHO05D009400 1.8e-101 373.6 377 52.0
AUR62035272 Chenopodium quinoa HOM05D007389 ORTHO05D009400 7.4e-100 368.2 383 50.7
AagrBONN_evm.TU.Sc2ySwM_228.4489 Anthoceros agrestis HOM05D007389 ORTHO05D009400 1.4e-98 364.0 378 48.7
THA.LOC104825707 Tarenaya hassleriana HOM05D007389 ORTHO05D009400 1.5e-97 360.5 382 50.3
SGA_v2.0_scaffold124G33583 Striga asiatica HOM05D007389 ORTHO05D009400 1.0e-96 357.8 379 50.7
Oeu042041.1 Olea europaea HOM05D007389 ORTHO05D009400 1.3e-96 357.5 302 59.3
Lj3A1018T64 Lonicera japonica HOM05D007389 ORTHO05D009400 5.0e-96 355.5 363 53.2
Mapoly0108s0021 Marchantia polymorpha HOM05D007389 ORTHO05D009400 1.4e-95 354.0 381 48.6
CDE08G0863 Ceratophyllum demersum HOM05D007389 ORTHO05D009400 2.5e-95 353.2 381 47.8
CDE02G3618 Ceratophyllum demersum HOM05D007389 ORTHO05D009400 5.5e-95 352.1 381 47.8
Dinv21123 Davidia involucrata HOM05D007389 ORTHO05D009400 1.0e-93 347.8 268 68.3
QL01p044805 Quercus lobata HOM05D007389 ORTHO05D009400 3.0e-93 346.3 264 68.2
PSO063G2802 Papaver somniferum HOM05D007389 ORTHO05D009400 1.1e-92 344.4 384 52.9
Pp3c15_5000 Physcomitrium patens HOM05D007389 ORTHO05D009400 1.1e-90 337.8 407 45.7
SMO361G0332 Selaginella moellendorffii HOM05D007389 ORTHO05D009400 1.6e-89 334.0 368 50.0
Cpa.g.sc1.212 Carica papaya HOM05D007389 ORTHO05D009400 4.5e-89 332.4 262 63.7
Sp1g11820 Schrenkiella parvula HOM05D007389 ORTHO05D009400 1.9e-87 327.0 380 46.8
BraA08t35158Z Brassica rapa HOM05D007389 ORTHO05D009400 1.2e-86 324.3 375 46.9
Thhalv10009351m.g Eutrema salsugineum HOM05D007389 ORTHO05D009400 3.0e-85 319.7 381 46.7
A08p32350 Brassica napus HOM05D007389 ORTHO05D009400 1.2e-84 317.8 375 46.4
C08p16080 Brassica napus HOM05D007389 ORTHO05D009400 1.3e-83 314.3 375 45.6
BolC8t49230H Brassica oleracea HOM05D007389 ORTHO05D009400 1.7e-83 313.9 379 46.2
CARHR013690 Cardamine hirsuta HOM05D007389 ORTHO05D009400 2.7e-81 306.6 369 46.1
EL10Ac6g14465 Beta vulgaris HOM05D007389 ORTHO05D009400 8.5e-80 301.6 473 39.1
Carub.0001s1304 Capsella rubella HOM05D007389 ORTHO05D009400 9.4e-79 298.1 382 43.7
AT1G13310 Arabidopsis thaliana HOM05D007389 ORTHO05D009400 2.7e-78 296.6 379 44.1
unitig_27.g25245 Utricularia gibba HOM05D007389 ORTHO05D009400 1.8e-77 293.9 364 44.8
AL1G25070 Arabidopsis lyrata HOM05D007389 ORTHO05D009400 4.8e-75 285.8 379 43.5
AagrBONN_evm.TU.Sc2ySwM_362.2055 Anthoceros agrestis HOM05D007389 ORTHO05D009400 1.1e-74 284.6 263 57.0
HanXRQChr17g0567921 Helianthus annuus HOM05D007389 ORTHO05D009400 1.6e-73 280.8 258 55.0
HPP92_023813 Vanilla planifolia HOM05D007389 ORTHO05D009400 2.5e-71 273.5 385 42.1
Aa31LG1G1460 Aethionema arabicum HOM05D007389 ORTHO05D009400 6.1e-70 268.9 368 42.4
Actinidia14859 Actinidia chinensis HOM05D007389 ORTHO05D009400 7.5e-68 261.9 238 61.8
AUR62002912 Chenopodium quinoa HOM05D007389 ORTHO05D009400 3.3e-63 246.5 377 38.7
Thhalv10023040m.g Eutrema salsugineum HOM05D007389 ORTHO05D009400 7.5e-60 235.3 381 36.7
FAN12G3113 Fragaria x ananassa HOM05D007389 ORTHO05D009400 9.2e-58 228.4 133 91.7
BcaC06g31117 Brassica carinata HOM05D007389 ORTHO05D009400 1.3e-48 198.0 372 34.9
CBR_g39725 Chara braunii HOM05D001740 ORTHO05D001468 3.0e-48 196.8 264 42.8
A06p42500 Brassica napus HOM05D001825 ORTHO05D002336 4.4e-44 183.0 369 33.6
BraA06t27163Z Brassica rapa HOM05D001825 ORTHO05D002336 2.9e-43 180.3 367 33.2
QL01p044810 Quercus lobata HOM05D007389 ORTHO05D009400 1.4e-42 177.9 117 70.1
SalBow8G3546 Salvia bowleyana HOM05D004993 ORTHO05D008532 6.2e-38 162.5 209 45.5
Duzib251G0237 Durio zibethinus HOM05D007389 ORTHO05D009400 1.1e-37 161.8 143 59.4
Lalb_Chr04g0254881 Lupinus albus HOM05D007389 ORTHO05D009400 2.2e-35 154.1 114 60.5
PSO782G3111 Papaver somniferum HOM05D007389 ORTHO05D009400 2.9e-35 153.7 169 49.7
BcaC06g33956 Brassica carinata HOM05D007389 ORTHO05D009400 2.1e-30 137.5 371 31.0
TAR629G0747 Trochodendron aralioides HOM05D007389 ORTHO05D009400 9.0e-29 132.1 181 45.9
BolC7t44001H Brassica oleracea HOM05D001825 ORTHO05D002336 2.9e-27 127.1 313 32.3
C07p34700 Brassica napus HOM05D001825 ORTHO05D002336 1.2e-25 121.7 320 32.2
MCO11G211 Micromonas commoda HOM05D007389 ORTHO05D009400 2.8e-22 110.5 207 33.3
TAR573G0003 Trochodendron aralioides HOM05D007389 ORTHO05D009400 6.2e-22 109.4 114 54.4
Nitab4.5_0000280g0130 Nicotiana tabacum HOM05D007389 ORTHO05D009400 9.9e-20 102.1 151 40.4
SalBow8G3870 Salvia bowleyana HOM05D007389 ORTHO05D009400 8.7e-16 89.0 100 48.0
Cre09.g393580 Chlamydomonas reinhardtii HOM05D007389 ORTHO05D143270 8.7e-08 62.4 92 41.3


User provided reference genes

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