Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G2040 Fragaria x ananassa HOM05D008207 ORTHO05D010373 3.4e-233 811.2 384 100.0
FAN22G1797 Fragaria x ananassa HOM05D008207 ORTHO05D010373 8.9e-218 760.0 392 93.4
FAN07G0484 Fragaria x ananassa HOM05D008207 ORTHO05D010373 2.9e-213 745.0 374 94.4
RcHm_v2.0_Chr4g0398551 Rosa chinensis HOM05D008207 ORTHO05D010373 2.6e-201 705.3 389 88.2
FAN12G1624 Fragaria x ananassa HOM05D008207 ORTHO05D000286 1.8e-186 656.0 345 92.2
Prupe.1G068900 Prunus persica HOM05D008207 ORTHO05D010373 4.7e-134 481.9 268 84.3
CiPaw.07G200900 Carya illinoinensis HOM05D008207 ORTHO05D010373 1.0e-128 464.2 283 74.9
Glyma.13G103300 Glycine max HOM05D008207 ORTHO05D010373 7.2e-127 458.0 289 72.3
FvH4_4g06651 Fragaria vesca HOM05D008207 ORTHO05D010373 4.7e-126 455.3 264 85.2
TAR625G1057 Trochodendron aralioides HOM05D008207 ORTHO05D010373 8.0e-126 454.5 321 68.5
GSVIVG01029258001 Vitis vinifera HOM05D008207 ORTHO05D010373 4.0e-125 452.2 292 74.3
VMungo1215G1326 Vigna mungo HOM05D008207 ORTHO05D010373 5.7e-124 448.4 293 71.7
Dinv41210 Davidia involucrata HOM05D008207 ORTHO05D010373 2.8e-123 446.0 296 69.9
arahy.Tifrunner.gnm1.ann1.PC6R8Z Arachis hypogaea HOM05D008207 ORTHO05D010373 6.3e-123 444.9 284 72.9
Ca_21275_v3 Cicer arietinum L. HOM05D008207 ORTHO05D010373 9.1e-122 441.0 313 68.4
Phvul.003G137466 Phaseolus vulgaris HOM05D008207 ORTHO05D010373 1.3e-120 437.2 280 72.5
CsaV3_1G032120 Cucumis sativus L. HOM05D008207 ORTHO05D010373 2.9e-120 436.0 317 66.9
arahy.Tifrunner.gnm1.ann1.7T8Q8E Arachis hypogaea HOM05D008207 ORTHO05D010373 8.5e-120 434.5 299 69.2
Sed0019966 Sechium edule HOM05D008207 ORTHO05D010373 8.5e-120 434.5 297 70.0
CSS0025795 Camellia sinensis var. sinensis HOM05D008207 ORTHO05D010373 1.1e-119 434.1 291 70.1
Medtr4g126910 Medicago truncatula HOM05D008207 ORTHO05D010373 3.2e-119 432.6 284 71.8
MELO3C017404.2 Cucumis melo HOM05D008207 ORTHO05D010373 1.2e-118 430.6 278 73.0
TPR.G5411 Trifolium pratense HOM05D008207 ORTHO05D010373 2.1e-118 429.9 277 73.3
Lalb_Chr12g0199751 Lupinus albus HOM05D008207 ORTHO05D010373 6.1e-118 428.3 284 71.1
Hma1.2p1_0235F.1_g099000 Hydrangea macrophylla HOM05D008207 ORTHO05D010373 1.5e-116 423.7 290 69.3
ClCG06G013910 Citrullus lanatus HOM05D008207 ORTHO05D010373 3.7e-115 419.1 342 62.0
Aqoxy7G02948 Aquilegia oxysepala HOM05D008207 ORTHO05D010373 7.0e-114 414.8 283 68.6
Lj4g0004064 Lotus japonicus HOM05D008207 ORTHO05D010373 9.1e-114 414.5 283 70.0
Eucgr.C00072 Eucalyptus grandis HOM05D008207 ORTHO05D010373 2.7e-113 412.9 261 72.4
MBI14_g19451_MAGBIO Magnolia biondii HOM05D008207 ORTHO05D010373 7.2e-111 404.8 292 67.5
PSO170G1964 Papaver somniferum HOM05D008207 ORTHO05D010373 1.0e-109 401.0 251 73.3
AUR62033242 Chenopodium quinoa HOM05D008207 ORTHO05D010373 2.6e-108 396.4 283 66.4
Sabra12G0024900 Salix brachista HOM05D008207 ORTHO05D010373 1.3e-107 394.0 350 59.7
Hund26321 Selenicereus undatus HOM05D008207 ORTHO05D010373 1.5e-103 380.6 360 53.3
ATR0580G068 Amborella trichopoda HOM05D008207 ORTHO05D010373 4.7e-102 375.6 280 62.1
MD16G1242100 Malus domestica HOM05D008207 ORTHO05D010373 4.9e-99 365.5 304 63.8
Rhsim01G0002700 Rhododendron simsii HOM05D008207 ORTHO05D010373 6.2e-94 348.6 207 76.8
Aqoxy5G03535 Aquilegia oxysepala HOM05D008207 ORTHO05D010373 1.2e-92 344.4 256 66.4
DCAR_009922 Daucus carota HOM05D008207 ORTHO05D010373 1.5e-92 344.0 341 53.1
AUR62021326 Chenopodium quinoa HOM05D008207 ORTHO05D010373 1.7e-91 340.5 280 60.0
Psat4g014640 Pisum sativum HOM05D008207 ORTHO05D010373 1.6e-89 334.0 230 69.1
vmacro13136 Vaccinium macrocarpon HOM05D008207 ORTHO05D010373 1.3e-88 330.9 301 57.5
CDE05G0633 Ceratophyllum demersum HOM05D008207 ORTHO05D010373 1.6e-86 323.9 300 54.7
Pp3c22_15400 Physcomitrium patens HOM05D008207 ORTHO05D010373 1.8e-85 320.5 278 55.4
EL10Ac8g18310 Beta vulgaris HOM05D008207 ORTHO05D010373 8.9e-85 318.2 254 62.6
Haze_22076 Corylus avellana HOM05D008207 ORTHO05D010373 3.5e-81 306.2 197 73.6
Mapoly0010s0073 Marchantia polymorpha HOM05D008207 ORTHO05D010373 2.4e-74 283.5 242 55.8
Eucgr.L03679 Eucalyptus grandis HOM05D008207 ORTHO05D010373 9.3e-58 228.4 162 66.0
Potri.012G036400 Populus trichocarpa HOM05D008207 ORTHO05D010373 9.9e-52 208.4 147 71.4
SMO351G0474 Selaginella moellendorffii HOM05D008207 ORTHO05D010373 1.1e-45 188.3 245 44.5
Actinidia01309 Actinidia chinensis HOM05D008207 ORTHO05D010373 1.8e-45 187.6 116 73.3
Actinidia01310 Actinidia chinensis HOM05D008207 ORTHO05D010373 1.1e-42 178.3 134 61.9
MD16G1242000 Malus domestica HOM05D008207 ORTHO05D010373 2.5e-39 167.2 102 73.5
Os02g0462401 Oryza sativa ssp. japonica HOM05D008207 ORTHO05D010373 4.8e-38 162.9 116 61.2
Glyma.16G118000 Glycine max HOM05D008207 ORTHO05D010373 1.1e-34 151.8 91 73.6
arahy.Tifrunner.gnm1.ann1.G9LR05 Arachis hypogaea HOM05D008207 ORTHO05D010373 3.0e-32 143.7 95 71.6
Psat0s6286g0080 Pisum sativum HOM05D008207 ORTHO05D010373 2.6e-28 130.6 97 62.9
MCO11G473 Micromonas commoda HOM05D008207 ORTHO05D010373 9.4e-26 122.1 254 34.3
arahy.Tifrunner.gnm1.ann1.QBT4P1 Arachis hypogaea HOM05D008207 ORTHO05D010373 7.9e-25 119.0 103 59.2
SEGI_04181 Sequoiadendron giganteum HOM05D008207 ORTHO05D010373 1.0e-24 118.6 74 70.3
SEGI_33506 Sequoiadendron giganteum HOM05D008207 ORTHO05D010373 1.5e-23 114.8 116 45.7
Glyma.02G093251 Glycine max HOM05D008207 ORTHO05D010373 2.6e-23 114.0 69 73.9
Haze_22075 Corylus avellana HOM05D008207 ORTHO05D010373 5.3e-21 106.3 58 77.6
Psat0s6286g0040 Pisum sativum HOM05D003133 ORTHO05D010373 2.5e-18 97.4 76 61.8
Os02g0462300 Oryza sativa ssp. japonica HOM05D008207 ORTHO05D010373 5.5e-18 96.3 49 81.6
SEGI_16784 Sequoiadendron giganteum HOM05D008207 ORTHO05D010373 2.7e-17 94.0 65 63.1
Sabra15G0023300 Salix brachista HOM05D001936 ORTHO05D002296 4.7e-09 66.6 64 53.1


User provided reference genes

Program Settings