Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G2009 Fragaria x ananassa HOM05D001216 ORTHO05D008355 1.4e-130 469.5 227 100.0
FvH4_3g43881 Fragaria vesca HOM05D001216 ORTHO05D008355 5.8e-108 394.4 264 77.7
FAN03G0335 Fragaria x ananassa HOM05D001216 ORTHO05D008355 5.8e-108 394.4 261 77.8
RcHm_v2.0_Chr1g0383931 Rosa chinensis HOM05D001216 ORTHO05D008355 7.8e-105 384.0 261 75.9
FAN10G1381 Fragaria x ananassa HOM05D001216 ORTHO05D008355 5.6e-103 377.9 261 75.9
FAN01G2135 Fragaria x ananassa HOM05D001216 ORTHO05D008355 3.6e-102 375.2 261 75.5
MD07G1306500 Malus domestica HOM05D001216 ORTHO05D008355 1.4e-90 336.7 265 67.9
CANSAT21G1267 Cannabis sativa HOM05D001216 ORTHO05D008355 3.0e-88 328.9 260 64.6
GSVIVG01024422001 Vitis vinifera HOM05D001216 ORTHO05D008355 8.1e-86 320.9 272 62.9
Prupe.2G324500 Prunus persica HOM05D001216 ORTHO05D008355 1.1e-85 320.5 267 65.9
Gohir.A13G155300 Gossypium hirsutum HOM05D001216 ORTHO05D008355 1.4e-85 320.1 264 62.9
Gohir.D13G160100 Gossypium hirsutum HOM05D001216 ORTHO05D008355 2.4e-85 319.3 264 62.9
Gorai.013G181000 Gossypium raimondii HOM05D001216 ORTHO05D008355 2.4e-85 319.3 264 62.9
Cfa015879 Carpinus fangiana HOM05D001216 ORTHO05D008355 4.0e-85 318.5 262 63.4
Duzib106G0833 Durio zibethinus HOM05D001216 ORTHO05D008355 6.9e-85 317.8 262 64.9
Manes.09G124400 Manihot esculenta HOM05D001216 ORTHO05D008355 9.9e-84 313.9 266 63.2
Dinv29167 Davidia involucrata HOM05D001216 ORTHO05D008355 8.4e-83 310.8 264 62.1
PGR142G1409 Punica granatum HOM05D001216 ORTHO05D008355 8.4e-83 310.8 263 61.6
Eucgr.K00092 Eucalyptus grandis HOM05D001216 ORTHO05D008355 1.4e-82 310.1 262 62.2
Thecc.05G209300 Theobroma cacao HOM05D001216 ORTHO05D008355 1.9e-82 309.7 269 61.3
Ciclev10018854m.g Citrus clementina HOM05D001216 ORTHO05D008355 5.4e-82 308.1 264 61.4
COL.COLO4_06399 Corchorus olitorius HOM05D001216 ORTHO05D008355 5.4e-82 308.1 290 57.6
ClCG10G009060 Citrullus lanatus HOM05D001216 ORTHO05D008355 9.3e-82 307.4 264 61.4
Nn1g01970 Nelumbo nucifera HOM05D001216 ORTHO05D008355 6.0e-81 304.7 269 58.0
Hma1.2p1_1235F.1_g269080 Hydrangea macrophylla HOM05D001216 ORTHO05D008355 7.9e-81 304.3 263 60.8
Potri.013G089000 Populus trichocarpa HOM05D001216 ORTHO05D008355 1.3e-80 303.5 266 62.4
CSS0049591 Camellia sinensis var. sinensis HOM05D001216 ORTHO05D008355 1.8e-80 303.1 264 61.7
MELO3C024870.2 Cucumis melo HOM05D001216 ORTHO05D008355 1.8e-80 303.1 267 60.7
CSS0014281 Camellia sinensis var. sinensis HOM05D001216 ORTHO05D008355 2.3e-80 302.8 264 61.4
Sed0005129 Sechium edule HOM05D001216 ORTHO05D008355 2.3e-80 302.8 265 60.0
Oeu061067.1 Olea europaea HOM05D001216 ORTHO05D008355 3.9e-80 302.0 265 59.2
Rhsim03G0220900 Rhododendron simsii HOM05D001216 ORTHO05D008355 1.1e-79 300.4 262 61.8
Ca_24450_v3 Cicer arietinum L. HOM05D001216 ORTHO05D008355 1.9e-79 299.7 264 60.2
CAN.G303.74 Capsicum annuum HOM05D001216 ORTHO05D008355 2.5e-79 299.3 269 56.9
Actinidia34302 Actinidia chinensis HOM05D001216 ORTHO05D008355 3.3e-79 298.9 264 60.6
Cc02_g00370 Coffea canephora HOM05D001216 ORTHO05D008355 3.3e-79 298.9 269 58.0
CsaV3_4G008710 Cucumis sativus L. HOM05D001216 ORTHO05D008355 3.3e-79 298.9 267 60.3
Peaxi162Scf00745g00860 Petunia axillaris HOM05D001216 ORTHO05D008355 4.3e-79 298.5 267 56.9
arahy.Tifrunner.gnm1.ann1.4MFR3H Arachis hypogaea HOM05D001216 ORTHO05D008355 5.6e-79 298.1 260 61.2
Actinidia08740 Actinidia chinensis HOM05D001216 ORTHO05D008355 7.4e-79 297.7 264 59.8
Psat0s769g0040 Pisum sativum HOM05D001216 ORTHO05D008355 7.4e-79 297.7 262 59.5
Glyma.01G229200 Glycine max HOM05D001216 ORTHO05D008355 9.6e-79 297.4 264 61.7
Nitab4.5_0005081g0010 Nicotiana tabacum HOM05D001216 ORTHO05D008355 2.8e-78 295.8 267 56.9
VMungo1215G2356 Vigna mungo HOM05D001216 ORTHO05D008355 3.7e-78 295.4 263 61.6
LjContig00222g0021656 Lotus japonicus HOM05D001216 ORTHO05D008355 4.8e-78 295.0 262 60.7
Solyc03g096900.4 Solanum lycopersicum HOM05D001216 ORTHO05D008355 4.8e-78 295.0 266 57.5
Sopen03g027650 Solanum pennellii HOM05D001216 ORTHO05D008355 4.8e-78 295.0 266 57.5
Atru.chr12.1986 Acer truncatum HOM05D001216 ORTHO05D008355 6.2e-78 294.7 264 59.1
SalBow2G2269 Salvia bowleyana HOM05D001216 ORTHO05D008355 6.2e-78 294.7 266 57.1
Glyma.11G012000 Glycine max HOM05D001216 ORTHO05D008355 8.1e-78 294.3 264 61.4
Phvul.002G038200 Phaseolus vulgaris HOM05D001216 ORTHO05D008355 1.1e-77 293.9 263 60.8
MSTRG.8578 Avicennia marina HOM05D001216 ORTHO05D008355 2.4e-77 292.7 263 57.0
Medtr5g007870 Medicago truncatula HOM05D001216 ORTHO05D008355 4.0e-77 292.0 262 58.0
HanXRQChr14g0462961 Helianthus annuus HOM05D001216 ORTHO05D008355 6.9e-77 291.2 263 56.7
ATR0829G059 Amborella trichopoda HOM05D001216 ORTHO05D008355 2.6e-76 289.3 271 55.0
Aqoxy7G00876 Aquilegia oxysepala HOM05D001216 ORTHO05D008355 4.5e-76 288.5 267 56.6
DCAR_010546 Daucus carota HOM05D001216 ORTHO05D008355 4.5e-76 288.5 266 57.1
Lalb_Chr16g0376611 Lupinus albus HOM05D001216 ORTHO05D008355 3.8e-75 285.4 262 60.3
MBI04_g37552_MAGBIO Magnolia biondii HOM05D001216 ORTHO05D008355 3.8e-75 285.4 268 57.1
Lj3C889T5 Lonicera japonica HOM05D001216 ORTHO05D008355 4.9e-75 285.0 270 55.9
Migut.F00951 Erythranthe guttata HOM05D001216 ORTHO05D008355 1.4e-74 283.5 270 54.8
TPR.G37925 Trifolium pratense HOM05D001216 ORTHO05D008355 1.4e-74 283.5 262 57.3
Nitab4.5_0000021g0450 Nicotiana tabacum HOM05D001216 ORTHO05D008355 2.5e-74 282.7 264 56.1
Sc25g0001170 Simmondsia chinensis HOM05D001216 ORTHO05D008355 4.2e-74 282.0 265 57.0
Lsat_1_v5_gn_2_135361 Lactuca sativa HOM05D001216 ORTHO05D008355 9.3e-74 280.8 270 54.4
EL10Ac3g05091 Beta vulgaris HOM05D001216 ORTHO05D008355 1.6e-73 280.0 265 56.2
vmacro06504 Vaccinium macrocarpon HOM05D001216 ORTHO05D008355 3.0e-72 275.8 327 49.8
ECA238G0596 Erigeron canadensis HOM05D001216 ORTHO05D008355 3.9e-72 275.4 264 55.7
Os02g0699400 Oryza sativa ssp. japonica HOM05D001216 ORTHO05D008355 5.1e-72 275.0 265 52.8
Hund21094 Selenicereus undatus HOM05D001216 ORTHO05D008355 8.7e-72 274.2 267 54.7
TWI34G0259 Tripterygium wilfordii HOM05D001216 ORTHO05D008355 3.3e-71 272.3 230 61.7
PSO675G9306 Papaver somniferum HOM05D001216 ORTHO05D008355 9.6e-71 270.8 265 54.3
unitig_52.g16851 Utricularia gibba HOM05D001216 ORTHO05D008355 9.6e-71 270.8 262 55.0
Ah.13g072640 Amaranthus hybridus HOM05D001216 ORTHO05D008355 1.3e-70 270.4 263 55.9
SGA_v2.0_scaffold59G20777 Striga asiatica HOM05D001216 ORTHO05D008355 1.1e-69 267.3 250 56.0
CDE02G2862 Ceratophyllum demersum HOM05D001216 ORTHO05D008355 6.9e-69 264.6 262 53.1
arahy.Tifrunner.gnm1.ann1.LQ97JF Arachis hypogaea HOM05D001216 ORTHO05D008355 2.6e-68 262.7 236 59.7
CDE11G0509 Ceratophyllum demersum HOM05D001216 ORTHO05D008355 3.4e-68 262.3 262 53.1
SEGI_10998 Sequoiadendron giganteum HOM05D001216 ORTHO05D008355 4.3e-63 245.4 269 50.6
Mapoly0035s0150 Marchantia polymorpha HOM05D001216 ORTHO05D008355 9.4e-58 227.6 269 44.6
QL09p024777 Quercus lobata HOM05D001216 ORTHO05D008355 1.1e-55 220.7 236 52.1
Pp3c16_11940 Physcomitrium patens HOM05D001216 ORTHO05D008355 9.7e-55 217.6 262 43.5
TAR374G0425 Trochodendron aralioides HOM05D001216 ORTHO05D008355 7.7e-52 208.0 190 56.3
Actinidia04569 Actinidia chinensis HOM05D001216 ORTHO05D008355 2.9e-51 206.1 203 56.7
CiPaw.05G238500 Carya illinoinensis HOM05D001216 ORTHO05D008355 2.9e-51 206.1 133 71.4
CBR_g26129 Chara braunii HOM05D000019 ORTHO05D000002 1.2e-49 200.7 270 42.6
AUR62028158 Chenopodium quinoa HOM05D001216 ORTHO05D008355 2.1e-49 199.9 269 45.4
AUR62005907 Chenopodium quinoa HOM05D001216 ORTHO05D008355 2.7e-49 199.5 269 45.4
Sabra13G0069500 Salix brachista HOM05D001216 ORTHO05D008355 5.2e-40 168.7 125 66.4
Cpa.g.sc659.3 Carica papaya HOM05D001216 ORTHO05D008355 1.5e-39 167.2 104 75.0
Haze_00609 Corylus avellana HOM05D001216 ORTHO05D008355 2.8e-38 162.9 104 74.0
PGSC0003DMG400000537 Solanum tuberosum HOM05D001216 ORTHO05D008355 3.8e-35 152.5 104 68.3
Cpa.g.sc659.1 Carica papaya HOM05D001216 ORTHO05D008355 8.5e-35 151.4 162 53.7
Sabra13G0069600 Salix brachista HOM05D001216 ORTHO05D008355 1.6e-33 147.1 163 54.0
CANSAT21G0533 Cannabis sativa HOM05D001216 ORTHO05D008355 8.3e-30 134.8 80 71.2
FvH4_3g43851 Fragaria vesca HOM05D001216 ORTHO05D008355 1.6e-28 130.6 108 63.0
FvH4_7g33820 Fragaria vesca HOM05D001216 ORTHO05D008355 1.6e-25 120.6 63 95.2
QL09p024763 Quercus lobata HOM05D001216 ORTHO05D008355 2.9e-19 99.8 62 79.0
Zm00001eb188060 Zea mays HOM05D001216 ORTHO05D008355 2.3e-16 90.1 110 39.1
arahy.Tifrunner.gnm1.ann1.JUAY6G Arachis hypogaea HOM05D002475 ORTHO05D008355 3.9e-11 72.8 60 65.0
arahy.Tifrunner.gnm1.ann1.VS67CL Arachis hypogaea HOM05D001216 ORTHO05D008355 1.2e-07 61.2 38 78.9
PRCOL_00001354 Prasinoderma coloniale HOM05D001216 ORTHO05D008355 8.3e-06 55.1 138 31.2


User provided reference genes

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