Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G1889 Fragaria x ananassa HOM05D006230 ORTHO05D007598 1.0e-76 290.0 151 100.0
FvH4_4g04200 Fragaria vesca HOM05D006230 ORTHO05D007598 1.5e-72 276.2 151 95.4
FAN12G2171 Fragaria x ananassa HOM05D006230 ORTHO05D007598 2.6e-72 275.4 151 95.4
RcHm_v2.0_Chr4g0394691 Rosa chinensis HOM05D006230 ORTHO05D007598 1.2e-69 266.5 151 92.1
MD16G1223800 Malus domestica HOM05D006230 ORTHO05D007598 7.1e-54 214.2 154 78.6
Prupe.1G045100 Prunus persica HOM05D006230 ORTHO05D007598 1.6e-53 213.0 155 76.1
RcHm_v2.0_Chr4g0394651 Rosa chinensis HOM05D006230 ORTHO05D007598 3.3e-51 205.3 155 74.8
Haze_11428 Corylus avellana HOM05D006230 ORTHO05D007598 2.6e-48 195.7 153 70.6
Cfa014753 Carpinus fangiana HOM05D006230 ORTHO05D007598 3.4e-48 195.3 153 69.9
MD13G1218400 Malus domestica HOM05D006230 ORTHO05D007598 1.3e-47 193.4 112 87.5
CANSAT78G0232 Cannabis sativa HOM05D006230 ORTHO05D007598 6.5e-47 191.0 156 70.5
CANSAT78G0887 Cannabis sativa HOM05D006230 ORTHO05D007598 6.5e-47 191.0 156 69.9
Sp4g15790 Schrenkiella parvula HOM05D006230 ORTHO05D007598 2.1e-45 186.0 130 70.8
AT2G33450 Arabidopsis thaliana HOM05D006230 ORTHO05D007598 4.6e-45 184.9 128 72.7
CiPaw.02G108600 Carya illinoinensis HOM05D006230 ORTHO05D007598 1.0e-44 183.7 155 66.5
Dinv27088 Davidia involucrata HOM05D006230 ORTHO05D007598 1.0e-44 183.7 139 71.2
Carub.0004s1508 Capsella rubella HOM05D006230 ORTHO05D007598 5.1e-44 181.4 128 71.1
Thhalv10017390m.g Eutrema salsugineum HOM05D006230 ORTHO05D007598 6.7e-44 181.0 117 75.2
AL4G29120 Arabidopsis lyrata HOM05D006230 ORTHO05D007598 8.7e-44 180.6 128 71.1
CSS0007771 Camellia sinensis var. sinensis HOM05D006230 ORTHO05D007598 8.7e-44 180.6 139 68.3
CARHR127460 Cardamine hirsuta HOM05D006230 ORTHO05D007598 8.7e-44 180.6 128 71.1
BolC4t27775H Brassica oleracea HOM05D006230 ORTHO05D007598 2.5e-43 179.1 135 69.6
Potri.010G068500 Populus trichocarpa HOM05D006230 ORTHO05D007598 2.5e-43 179.1 142 66.2
Sabra10G0038500 Salix brachista HOM05D006230 ORTHO05D007598 4.3e-43 178.3 139 65.5
BraA04t18078Z Brassica rapa HOM05D006230 ORTHO05D007598 5.7e-43 177.9 135 68.9
THA.LOC104801077 Tarenaya hassleriana HOM05D006230 ORTHO05D007598 7.4e-43 177.6 141 68.1
Atru.chr4.1981 Acer truncatum HOM05D006230 ORTHO05D007598 9.6e-43 177.2 153 66.7
BcaB02g10562 Brassica carinata HOM05D006230 ORTHO05D007598 9.6e-43 177.2 129 72.9
QL06p019992 Quercus lobata HOM05D006230 ORTHO05D007598 9.6e-43 177.2 160 65.0
Aa31LG5G3840 Aethionema arabicum HOM05D006230 ORTHO05D007598 1.3e-42 176.8 144 63.9
TWI73G0434 Tripterygium wilfordii HOM05D006230 ORTHO05D007598 1.3e-42 176.8 149 67.1
C04p62980 Brassica napus HOM05D006230 ORTHO05D007598 2.1e-42 176.0 135 68.9
Sed0003219 Sechium edule HOM05D006230 ORTHO05D007598 4.8e-42 174.9 131 71.8
Manes.15G043800 Manihot esculenta HOM05D006230 ORTHO05D007598 6.3e-42 174.5 154 61.0
Sed0015876 Sechium edule HOM05D006230 ORTHO05D007598 6.3e-42 174.5 128 69.5
BcaB06g28689 Brassica carinata HOM05D006230 ORTHO05D007598 8.2e-42 174.1 136 68.4
Ciclev10006136m.g Citrus clementina HOM05D006230 ORTHO05D007598 8.2e-42 174.1 128 67.2
Sp1g03290 Schrenkiella parvula HOM05D006230 ORTHO05D007598 8.2e-42 174.1 149 63.8
A04p25750 Brassica napus HOM05D006230 ORTHO05D007598 1.4e-41 173.3 136 68.4
Thecc.04G260000 Theobroma cacao HOM05D006230 ORTHO05D007598 1.4e-41 173.3 123 73.2
MELO3C006400.2 Cucumis melo HOM05D006230 ORTHO05D007598 1.8e-41 172.9 131 71.0
Carub.0001s0365 Capsella rubella HOM05D006230 ORTHO05D007598 2.4e-41 172.6 117 72.6
Potri.008G169800 Populus trichocarpa HOM05D006230 ORTHO05D007598 2.4e-41 172.6 118 70.3
CsaV3_3G011880 Cucumis sativus L. HOM05D006230 ORTHO05D007598 3.1e-41 172.2 129 71.3
Duzib151G0304 Durio zibethinus HOM05D006230 ORTHO05D007598 6.9e-41 171.0 123 73.2
TAR636G3560 Trochodendron aralioides HOM05D006230 ORTHO05D007598 6.9e-41 171.0 158 61.4
ClCG05G004160 Citrullus lanatus HOM05D006230 ORTHO05D007598 9.0e-41 170.6 154 64.9
Eucgr.H02995 Eucalyptus grandis HOM05D006230 ORTHO05D007598 9.0e-41 170.6 152 63.2
AL1G14110 Arabidopsis lyrata HOM05D006230 ORTHO05D007598 1.2e-40 170.2 117 72.6
BcaC02g11431 Brassica carinata HOM05D006230 ORTHO05D007598 1.2e-40 170.2 129 69.8
C04p15650 Brassica napus HOM05D006230 ORTHO05D007598 1.2e-40 170.2 129 69.8
Hma1.2p1_0112F.1_g054490 Hydrangea macrophylla HOM05D006230 ORTHO05D007598 1.5e-40 169.9 139 66.2
TWI53G0221 Tripterygium wilfordii HOM05D006230 ORTHO05D007598 1.5e-40 169.9 150 66.7
Aqoxy2G03714 Aquilegia oxysepala HOM05D006230 ORTHO05D007598 2.0e-40 169.5 134 68.7
COL.COLO4_15930 Corchorus olitorius HOM05D006230 ORTHO05D007598 2.0e-40 169.5 125 70.4
Lalb_Chr01g0020881 Lupinus albus HOM05D006230 ORTHO05D007598 2.0e-40 169.5 140 65.0
Cpa.g.sc44.25 Carica papaya HOM05D006230 ORTHO05D007598 2.6e-40 169.1 139 64.7
Lalb_Chr03g0037521 Lupinus albus HOM05D006230 ORTHO05D007598 2.6e-40 169.1 137 67.2
PGR004G2031 Punica granatum HOM05D006230 ORTHO05D007598 2.6e-40 169.1 151 63.6
Nitab4.5_0006936g0040 Nicotiana tabacum HOM05D006230 ORTHO05D007598 3.4e-40 168.7 142 66.9
Actinidia20827 Actinidia chinensis HOM05D006230 ORTHO05D007598 5.9e-40 167.9 121 71.9
Nitab4.5_0001425g0090 Nicotiana tabacum HOM05D006230 ORTHO05D007598 5.9e-40 167.9 142 66.9
Medtr1g041320 Medicago truncatula HOM05D006230 ORTHO05D007598 7.6e-40 167.5 128 67.2
Actinidia35808 Actinidia chinensis HOM05D006230 ORTHO05D007598 1.0e-39 167.2 149 62.4
Phvul.007G278700 Phaseolus vulgaris HOM05D006230 ORTHO05D007598 1.0e-39 167.2 131 67.9
Ca_05177_v3 Cicer arietinum L. HOM05D006230 ORTHO05D007598 2.2e-39 166.0 147 63.3
Duzib212G0996 Durio zibethinus HOM05D006230 ORTHO05D007598 2.2e-39 166.0 123 69.9
Gohir.A02G041200 Gossypium hirsutum HOM05D006230 ORTHO05D007598 5.0e-39 164.9 152 64.5
GSVIVG01027870001 Vitis vinifera HOM05D006230 ORTHO05D007598 5.0e-39 164.9 119 74.8
Sopen09g033320 Solanum pennellii HOM05D006230 ORTHO05D007598 6.5e-39 164.5 127 70.1
Lj6g0026311 Lotus japonicus HOM05D006230 ORTHO05D007598 1.1e-38 163.7 118 70.3
Oeu023312.1 Olea europaea HOM05D006230 ORTHO05D007598 1.1e-38 163.7 129 68.2
Solyc09g090410.3 Solanum lycopersicum HOM05D006230 ORTHO05D007598 1.1e-38 163.7 127 69.3
Psat6g103800 Pisum sativum HOM05D006230 ORTHO05D007598 1.4e-38 163.3 117 68.4
BcaC02g07821 Brassica carinata HOM05D006230 ORTHO05D007598 2.5e-38 162.5 142 63.4
ECA234G3973 Erigeron canadensis HOM05D006230 ORTHO05D007598 2.5e-38 162.5 118 72.0
Sc13g0005900 Simmondsia chinensis HOM05D006230 ORTHO05D007598 2.5e-38 162.5 124 69.4
CAN.G220.45 Capsicum annuum HOM05D006230 ORTHO05D007598 3.2e-38 162.2 121 71.1
DCAR_002306 Daucus carota HOM05D006230 ORTHO05D007598 3.2e-38 162.2 120 74.2
Gorai.005G052000 Gossypium raimondii HOM05D006230 ORTHO05D007598 3.2e-38 162.2 152 63.8
Peaxi162Scf00602g00421 Petunia axillaris HOM05D006230 ORTHO05D007598 3.2e-38 162.2 149 65.1
TPR.G32792 Trifolium pratense HOM05D006230 ORTHO05D007598 3.2e-38 162.2 114 71.9
Glyma.10G002600 Glycine max HOM05D006230 ORTHO05D007598 4.2e-38 161.8 127 65.4
Lsat_1_v5_gn_2_39681 Lactuca sativa HOM05D006230 ORTHO05D007598 4.2e-38 161.8 136 65.4
BolC4t23134H Brassica oleracea HOM05D006230 ORTHO05D007598 5.5e-38 161.4 130 67.7
PSO063G4949 Papaver somniferum HOM05D006230 ORTHO05D007598 5.5e-38 161.4 152 61.8
PGSC0003DMG400017161 Solanum tuberosum HOM05D006230 ORTHO05D007598 5.5e-38 161.4 150 63.3
AUR62015538 Chenopodium quinoa HOM05D006230 ORTHO05D007598 7.2e-38 161.0 119 69.7
PSO017G6779 Papaver somniferum HOM05D006230 ORTHO05D007598 1.2e-37 160.2 152 61.8
Gohir.A10G109400 Gossypium hirsutum HOM05D006230 ORTHO05D007598 2.7e-37 159.1 115 70.4
Gohir.D02G047000 Gossypium hirsutum HOM05D006230 ORTHO05D007598 2.7e-37 159.1 152 63.2
Gohir.D10G157800 Gossypium hirsutum HOM05D006230 ORTHO05D007598 3.6e-37 158.7 115 71.3
Gorai.011G177300 Gossypium raimondii HOM05D006230 ORTHO05D007598 3.6e-37 158.7 115 71.3
Zm00001eb222850 Zea mays HOM05D006230 ORTHO05D007598 3.6e-37 158.7 128 64.1
Migut.G00496 Erythranthe guttata HOM05D006230 ORTHO05D007598 6.1e-37 157.9 132 65.2
HanXRQChr14g0434851 Helianthus annuus HOM05D006230 ORTHO05D007598 6.1e-37 157.9 131 68.7
EL10Ac3g04971 Beta vulgaris HOM05D006230 ORTHO05D007598 1.3e-36 156.8 157 58.6
SalBow3G4585 Salvia bowleyana HOM05D006230 ORTHO05D007598 1.8e-36 156.4 142 58.5
Hund11917 Selenicereus undatus HOM05D006230 ORTHO05D007598 2.3e-36 156.0 123 65.9
Cc03_g05900 Coffea canephora HOM05D006230 ORTHO05D007598 1.5e-35 153.3 152 57.9
ATR0736G074 Amborella trichopoda HOM05D006230 ORTHO05D007598 1.9e-35 152.9 116 69.8
Os05g0101400 Oryza sativa ssp. japonica HOM05D006230 ORTHO05D007598 7.4e-35 151.0 122 63.9
Zm00001eb047510 Zea mays HOM05D006230 ORTHO05D007598 1.3e-34 150.2 145 57.9
CDE05G0971 Ceratophyllum demersum HOM05D006230 ORTHO05D007598 2.8e-34 149.1 84 86.9
vmacro08530 Vaccinium macrocarpon HOM05D006230 ORTHO05D007598 1.4e-33 146.7 155 55.5
CDE11G0022 Ceratophyllum demersum HOM05D006230 ORTHO05D007598 3.1e-33 145.6 154 59.1
Oeu059405.1 Olea europaea HOM05D006230 ORTHO05D007598 3.1e-33 145.6 164 51.2
unitig_32.g10851 Utricularia gibba HOM05D006230 ORTHO05D007598 3.1e-33 145.6 121 65.3
HPP92_012809 Vanilla planifolia HOM05D006230 ORTHO05D007598 6.9e-33 144.4 120 65.8
arahy.Tifrunner.gnm1.ann1.ADZ0J4 Arachis hypogaea HOM05D006230 ORTHO05D007598 5.9e-32 141.4 76 88.2
Prupe.8G083300 Prunus persica HOM05D006230 ORTHO05D007598 2.2e-31 139.4 82 82.9
Thecc.10G124200 Theobroma cacao HOM05D006230 ORTHO05D007598 2.9e-31 139.0 91 74.7
SGA_v2.0_scaffold67G22731 Striga asiatica HOM05D006230 ORTHO05D007598 2.5e-30 136.0 147 52.4
MD00G1118000 Malus domestica HOM05D006230 ORTHO05D007598 3.2e-30 135.6 75 85.3
Rhsim04G0174900 Rhododendron simsii HOM05D006230 ORTHO05D007598 6.1e-29 131.3 86 76.7
SEGI_13554 Sequoiadendron giganteum HOM05D006230 ORTHO05D007598 4.4e-27 125.2 150 50.7
AagrBONN_evm.TU.Sc2ySwM_228.3795 Anthoceros agrestis HOM05D006230 ORTHO05D007598 3.4e-24 115.5 87 66.7
Pp3c6_1140 Physcomitrium patens HOM05D006230 ORTHO05D007598 7.7e-24 114.4 107 57.9
Mapoly0087s0077 Marchantia polymorpha HOM05D006230 ORTHO05D007598 2.2e-23 112.8 122 50.0
Ah.04g155450 Amaranthus hybridus HOM05D000071 ORTHO05D007598 6.5e-23 111.3 122 55.7
Pp3c5_28500 Physcomitrium patens HOM05D006230 ORTHO05D007598 6.5e-23 111.3 107 59.8
Duzib052G0467 Durio zibethinus HOM05D006230 ORTHO05D007598 1.2e-21 107.1 98 58.2
SMO131G0001 Selaginella moellendorffii HOM05D006230 ORTHO05D007598 1.4e-20 103.6 75 64.0
CBR_g23072 Chara braunii HOM05D006230 ORTHO05D007598 2.0e-19 99.8 78 62.8
Cre06.g265800 Chlamydomonas reinhardtii HOM05D006230 ORTHO05D007598 3.5e-16 89.0 77 54.5
MCO07G061 Micromonas commoda HOM05D006230 ORTHO05D007598 3.8e-15 85.5 135 40.0
Nn3g19733 Nelumbo nucifera HOM05D006230 ORTHO05D007598 2.9e-07 59.3 34 88.2


User provided reference genes

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