Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G1884 Fragaria x ananassa HOM05D005716 ORTHO05D007885 1.3e-91 339.7 170 100.0
FAN25G2810 Fragaria x ananassa HOM05D005716 ORTHO05D007885 1.5e-84 316.2 170 92.4
FAN23G0273 Fragaria x ananassa HOM05D005716 ORTHO05D007885 4.5e-81 304.7 166 91.0
Haze_05577 Corylus avellana HOM05D005716 ORTHO05D007885 8.0e-78 293.9 168 87.5
FvH4_3g05780 Fragaria vesca HOM05D005716 ORTHO05D007885 2.3e-77 292.4 164 89.6
FAN11G1575 Fragaria x ananassa HOM05D005716 ORTHO05D007885 2.3e-77 292.4 164 89.6
FAN16G2159 Fragaria x ananassa HOM05D005716 ORTHO05D007885 4.0e-77 291.6 164 89.0
FAN21G0047 Fragaria x ananassa HOM05D005716 ORTHO05D007885 4.0e-77 291.6 164 89.0
RcHm_v2.0_Chr5g0013751 Rosa chinensis HOM05D005716 ORTHO05D007885 5.2e-77 291.2 164 89.0
TAR627G0480 Trochodendron aralioides HOM05D005716 ORTHO05D007885 2.0e-76 289.3 164 87.8
MD05G1285700 Malus domestica HOM05D005716 ORTHO05D007885 3.3e-76 288.5 164 88.4
Nitab4.5_0005219g0060 Nicotiana tabacum HOM05D005716 ORTHO05D007885 3.3e-76 288.5 164 87.8
Prupe.4G079000 Prunus persica HOM05D005716 ORTHO05D007885 3.3e-76 288.5 164 88.4
Sc05g0006370 Simmondsia chinensis HOM05D005716 ORTHO05D007885 3.3e-76 288.5 164 87.8
Dinv32271 Davidia involucrata HOM05D005716 ORTHO05D007885 5.7e-76 287.7 164 88.4
ECA232G4567 Erigeron canadensis HOM05D005716 ORTHO05D007885 7.5e-76 287.3 164 87.8
HanXRQChr08g0230021 Helianthus annuus HOM05D005716 ORTHO05D007885 7.5e-76 287.3 164 87.8
CDE02G4127 Ceratophyllum demersum HOM05D005716 ORTHO05D007885 9.7e-76 287.0 164 87.8
Lsat_1_v5_gn_1_96721 Lactuca sativa HOM05D005716 ORTHO05D007885 9.7e-76 287.0 164 87.2
TWI09G0986 Tripterygium wilfordii HOM05D005716 ORTHO05D007885 9.7e-76 287.0 164 87.8
Peaxi162Scf00022g00310 Petunia axillaris HOM05D005716 ORTHO05D007885 1.7e-75 286.2 164 86.6
TWI53G0431 Tripterygium wilfordii HOM05D005716 ORTHO05D007885 1.7e-75 286.2 164 86.6
EL10Ac8g19740 Beta vulgaris HOM05D005716 ORTHO05D007885 2.2e-75 285.8 164 87.2
CiPaw.09G125500 Carya illinoinensis HOM05D005716 ORTHO05D007885 2.2e-75 285.8 164 87.2
AUR62027525 Chenopodium quinoa HOM05D005716 ORTHO05D007885 2.8e-75 285.4 164 87.2
Eucgr.E02383 Eucalyptus grandis HOM05D005716 ORTHO05D007885 2.8e-75 285.4 164 87.2
Potri.002G243500 Populus trichocarpa HOM05D005716 ORTHO05D007885 2.8e-75 285.4 164 86.6
Potri.002G243700 Populus trichocarpa HOM05D005716 ORTHO05D007885 2.8e-75 285.4 164 86.6
QL05p058825 Quercus lobata HOM05D005716 ORTHO05D007885 2.8e-75 285.4 164 87.2
Thecc.06G152400 Theobroma cacao HOM05D005716 ORTHO05D007885 2.8e-75 285.4 164 87.2
Eucgr.E02408 Eucalyptus grandis HOM05D005716 ORTHO05D007885 3.7e-75 285.0 164 87.2
Lj1A1186G50 Lonicera japonica HOM05D005716 ORTHO05D007885 3.7e-75 285.0 164 86.6
Oeu030916.2 Olea europaea HOM05D005716 ORTHO05D007885 3.7e-75 285.0 164 86.6
CAN.G650.23 Capsicum annuum HOM05D005716 ORTHO05D007885 4.8e-75 284.6 164 86.6
MELO3C002721.2 Cucumis melo HOM05D005716 ORTHO05D007885 4.8e-75 284.6 164 86.6
THA.LOC104812667 Tarenaya hassleriana HOM05D005716 ORTHO05D007885 4.8e-75 284.6 164 86.6
Ciclev10016173m.g Citrus clementina HOM05D005716 ORTHO05D007885 6.3e-75 284.3 164 85.4
DCAR_005122 Daucus carota HOM05D005716 ORTHO05D007885 6.3e-75 284.3 164 87.2
SGA_v2.0_scaffold106G30642 Striga asiatica HOM05D005716 ORTHO05D007885 6.3e-75 284.3 164 86.0
Zm00001eb343840 Zea mays HOM05D005716 ORTHO05D007885 6.3e-75 284.3 164 86.0
MD10G1263700 Malus domestica HOM05D005716 ORTHO05D007885 8.2e-75 283.9 164 87.2
Nn3g20701 Nelumbo nucifera HOM05D005716 ORTHO05D007885 8.2e-75 283.9 164 86.0
QL05p058849 Quercus lobata HOM05D005716 ORTHO05D007885 8.2e-75 283.9 164 86.6
TWI09G1196 Tripterygium wilfordii HOM05D005716 ORTHO05D007885 8.2e-75 283.9 164 86.6
Atru.chr10.1272 Acer truncatum HOM05D005716 ORTHO05D007885 1.1e-74 283.5 164 86.0
MSTRG.13250 Avicennia marina HOM05D005716 ORTHO05D007885 1.1e-74 283.5 164 84.8
CsaV3_1G032590 Cucumis sativus L. HOM05D005716 ORTHO05D007885 1.1e-74 283.5 164 86.6
Sopen02g019750 Solanum pennellii HOM05D005716 ORTHO05D007885 1.1e-74 283.5 164 86.0
PGSC0003DMG400008287 Solanum tuberosum HOM05D005716 ORTHO05D007885 1.1e-74 283.5 164 86.0
Cc09_g09370 Coffea canephora HOM05D005716 ORTHO05D007885 1.4e-74 283.1 164 85.4
Duzib235G0716 Durio zibethinus HOM05D005716 ORTHO05D007885 1.8e-74 282.7 164 86.0
MBI07_g15285_MAGBIO Magnolia biondii HOM05D005716 ORTHO05D007885 1.8e-74 282.7 164 86.6
MBI07_g26370_MAGBIO Magnolia biondii HOM05D005716 ORTHO05D007885 1.8e-74 282.7 164 86.6
PSO017G0333 Papaver somniferum HOM05D005716 ORTHO05D007885 1.8e-74 282.7 164 86.0
PSO478G1410 Papaver somniferum HOM05D005716 ORTHO05D007885 1.8e-74 282.7 164 86.0
Sabra02G0185400 Salix brachista HOM05D005716 ORTHO05D007885 1.8e-74 282.7 164 85.4
AL4G30440 Arabidopsis lyrata HOM05D005716 ORTHO05D007885 2.4e-74 282.3 164 86.0
Carub.0004s1614 Capsella rubella HOM05D005716 ORTHO05D007885 2.4e-74 282.3 164 86.0
PGR042G3684 Punica granatum HOM05D005716 ORTHO05D007885 2.4e-74 282.3 164 86.6
Solyc02g070670.4 Solanum lycopersicum HOM05D005716 ORTHO05D007885 2.4e-74 282.3 164 85.4
Actinidia07685 Actinidia chinensis HOM05D005716 ORTHO05D007885 3.1e-74 282.0 164 86.6
ATR0585G042 Amborella trichopoda HOM05D005716 ORTHO05D007885 3.1e-74 282.0 164 86.0
Aqoxy4G00105 Aquilegia oxysepala HOM05D005716 ORTHO05D007885 3.1e-74 282.0 164 86.0
CANSAT80G0786 Cannabis sativa HOM05D005716 ORTHO05D007885 3.1e-74 282.0 164 86.0
FAN02G1132 Fragaria x ananassa HOM05D005716 ORTHO05D007885 3.1e-74 282.0 203 73.4
COL.COLO4_31094 Corchorus olitorius HOM05D005716 ORTHO05D007885 4.1e-74 281.6 164 86.0
Sed0010647 Sechium edule HOM05D005716 ORTHO05D007885 4.1e-74 281.6 164 85.4
AT2G34470 Arabidopsis thaliana HOM05D005716 ORTHO05D007885 5.3e-74 281.2 164 85.4
BcaB06g28772 Brassica carinata HOM05D005716 ORTHO05D007885 5.3e-74 281.2 164 85.4
C04p63810 Brassica napus HOM05D005716 ORTHO05D007885 5.3e-74 281.2 164 85.4
BolC4t27848H Brassica oleracea HOM05D005716 ORTHO05D007885 5.3e-74 281.2 164 85.4
BraA04t18144Z Brassica rapa HOM05D005716 ORTHO05D007885 5.3e-74 281.2 164 85.4
CARHR128550 Cardamine hirsuta HOM05D005716 ORTHO05D007885 5.3e-74 281.2 164 85.4
Gohir.D10G040400 Gossypium hirsutum HOM05D005716 ORTHO05D007885 7.0e-74 280.8 164 86.0
Medtr4g096770 Medicago truncatula HOM05D005716 ORTHO05D007885 7.0e-74 280.8 164 85.4
Sp4g16740 Schrenkiella parvula HOM05D005716 ORTHO05D007885 7.0e-74 280.8 164 85.4
unitig_32.g11441 Utricularia gibba HOM05D005716 ORTHO05D007885 7.0e-74 280.8 164 85.4
Thhalv10017058m.g Eutrema salsugineum HOM05D005716 ORTHO05D007885 9.1e-74 280.4 164 85.4
Lalb_Chr07g0188621 Lupinus albus HOM05D005716 ORTHO05D007885 9.1e-74 280.4 164 86.0
Manes.17G068800 Manihot esculenta HOM05D005716 ORTHO05D007885 9.1e-74 280.4 164 84.8
SalBow7G1512 Salvia bowleyana HOM05D005716 ORTHO05D007885 9.1e-74 280.4 164 84.1
GSVIVG01021429001 Vitis vinifera HOM05D005716 ORTHO05D007885 9.1e-74 280.4 164 84.8
TPR.G4903 Trifolium pratense HOM05D005716 ORTHO05D007885 1.2e-73 280.0 164 85.4
Gorai.011G042600 Gossypium raimondii HOM05D005716 ORTHO05D007885 1.6e-73 279.6 164 85.4
Aa31LG10G6910 Aethionema arabicum HOM05D005716 ORTHO05D007885 2.0e-73 279.3 164 84.8
arahy.Tifrunner.gnm1.ann1.16PV68 Arachis hypogaea HOM05D005716 ORTHO05D007885 2.0e-73 279.3 164 85.4
arahy.Tifrunner.gnm1.ann1.MD42KV Arachis hypogaea HOM05D005716 ORTHO05D007885 2.0e-73 279.3 164 85.4
Os05g0565200 Oryza sativa ssp. japonica HOM05D005716 ORTHO05D007885 2.0e-73 279.3 164 84.8
Glyma.08G084800 Glycine max HOM05D005716 ORTHO05D007885 2.7e-73 278.9 164 84.8
Psat7g090160 Pisum sativum HOM05D005716 ORTHO05D007885 2.7e-73 278.9 164 84.1
HPP92_010050 Vanilla planifolia HOM05D005716 ORTHO05D007885 2.7e-73 278.9 164 84.8
Migut.H01369 Erythranthe guttata HOM05D005716 ORTHO05D007885 3.5e-73 278.5 164 84.8
Phvul.002G193800 Phaseolus vulgaris HOM05D005716 ORTHO05D007885 3.5e-73 278.5 164 84.1
Rhsim07G0173200 Rhododendron simsii HOM05D005716 ORTHO05D007885 3.5e-73 278.5 175 82.3
Ca_18267_v3 Cicer arietinum L. HOM05D005716 ORTHO05D007885 4.5e-73 278.1 164 84.8
VMungo0251G2847 Vigna mungo HOM05D005716 ORTHO05D007885 5.9e-73 277.7 164 84.1
SMO353G0068 Selaginella moellendorffii HOM05D005716 ORTHO05D007885 7.7e-73 277.3 164 84.1
SEGI_04817 Sequoiadendron giganteum HOM05D005716 ORTHO05D007885 2.2e-72 275.8 164 84.1
Pp3c24_19130 Physcomitrium patens HOM05D005716 ORTHO05D007885 3.8e-72 275.0 164 81.7
Mapoly0128s0016 Marchantia polymorpha HOM05D005716 ORTHO05D007885 6.5e-72 274.2 164 82.9
Hma1.2p1_0286F.1_g114150 Hydrangea macrophylla HOM05D005716 ORTHO05D007885 1.1e-71 273.5 164 84.1
AagrBONN_evm.TU.Sc2ySwM_117.3588 Anthoceros agrestis HOM05D005716 ORTHO05D007885 2.3e-69 265.8 164 81.1
RcHm_v2.0_Chr5g0013741 Rosa chinensis HOM05D005716 ORTHO05D007885 5.7e-68 261.2 144 89.6
CBR_g38955 Chara braunii HOM05D005716 ORTHO05D007885 2.2e-67 259.2 164 76.8
Nitab4.5_0001655g0090 Nicotiana tabacum HOM05D005716 ORTHO05D007885 3.7e-67 258.5 144 88.2
ClCG03G007040 Citrullus lanatus HOM05D005716 ORTHO05D007885 8.3e-67 257.3 144 88.2
vmacro17882 Vaccinium macrocarpon HOM05D005716 ORTHO05D007885 2.4e-66 255.8 228 62.7
Cpa.g.sc166.24 Carica papaya HOM05D005716 ORTHO05D007885 4.1e-66 255.0 144 87.5
PSO017G6742 Papaver somniferum HOM05D005716 ORTHO05D007885 7.7e-65 250.8 144 87.5
BcaC02g09191 Brassica carinata HOM05D005716 ORTHO05D031863 1.3e-64 250.0 145 85.5
Hund21524 Selenicereus undatus HOM05D005716 ORTHO05D007885 1.1e-63 246.9 154 81.2
A04p06350 Brassica napus HOM05D005716 ORTHO05D007885 5.5e-63 244.6 155 79.4
CSS0037137 Camellia sinensis var. sinensis HOM05D005716 ORTHO05D007885 1.2e-62 243.4 158 78.5
PRCOL_00002216 Prasinoderma coloniale HOM05D005716 ORTHO05D007885 4.4e-60 235.0 160 72.5
FAN02G0019 Fragaria x ananassa HOM05D005716 ORTHO05D007885 7.0e-58 227.6 154 77.3
C04p39880 Brassica napus HOM05D005716 ORTHO05D007885 1.1e-55 220.3 123 87.0
MCO04G141 Micromonas commoda HOM05D005716 ORTHO05D007885 1.4e-53 213.4 165 64.8
BolC4t25559H Brassica oleracea HOM05D005716 ORTHO05D007885 1.8e-53 213.0 127 84.3
BraA04t16339Z Brassica rapa HOM05D005716 ORTHO05D007885 5.2e-53 211.5 127 83.5
RcHm_v2.0_Chr5g0013721 Rosa chinensis HOM05D005716 ORTHO05D007885 6.2e-46 188.0 122 77.9
RcHm_v2.0_Chr5g0013731 Rosa chinensis HOM05D005716 ORTHO05D007885 5.8e-44 181.4 121 76.0
Haze_26810 Corylus avellana HOM05D005716 ORTHO05D164461 3.0e-40 169.1 165 52.7
Gohir.A10G039600 Gossypium hirsutum HOM05D005716 ORTHO05D007885 2.8e-38 162.5 103 78.6
Dinv30725 Davidia involucrata HOM05D005716 ORTHO05D007885 8.9e-37 157.5 114 71.9
FAN08G0336 Fragaria x ananassa HOM05D005716 ORTHO05D044022 5.4e-34 148.3 78 93.6
AUR62030221 Chenopodium quinoa HOM05D005716 ORTHO05D007885 1.6e-33 146.7 91 80.2
AUR62030223 Chenopodium quinoa HOM05D005716 ORTHO05D044022 1.3e-32 143.7 76 93.4
MSTRG.14769 Avicennia marina HOM05D005716 ORTHO05D007885 3.0e-32 142.5 93 76.3
FAN25G0382 Fragaria x ananassa HOM05D005716 ORTHO05D007885 2.9e-27 125.9 113 62.8
arahy.Tifrunner.gnm1.ann1.8LN2Z6 Arachis hypogaea HOM05D005716 ORTHO05D087704 7.8e-25 117.9 112 58.9
CAN.G94.3 Capsicum annuum HOM05D005716 ORTHO05D115662 2.2e-19 99.8 93 55.9
VMungo1309G0118 Vigna mungo HOM05D005716 ORTHO05D437644 2.9e-19 99.4 72 69.4


User provided reference genes

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