Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G1857 Fragaria x ananassa HOM05D006478 ORTHO05D008071 2.8e-86 322.0 172 100.0
FAN12G3923 Fragaria x ananassa HOM05D006478 ORTHO05D008071 3.4e-84 315.1 172 97.7
FvH4_4g13180 Fragaria vesca HOM05D006478 ORTHO05D008071 6.4e-83 310.8 172 96.5
RcHm_v2.0_Chr4g0413311 Rosa chinensis HOM05D006478 ORTHO05D008071 4.1e-74 281.6 174 87.4
FAN07G1397 Fragaria x ananassa HOM05D006478 ORTHO05D008071 2.5e-71 272.3 146 97.9
MD07G1255100 Malus domestica HOM05D006478 ORTHO05D008071 1.7e-64 249.6 173 76.9
Prupe.2G278900 Prunus persica HOM05D006478 ORTHO05D008071 5.6e-63 244.6 173 78.0
CiPaw.04G061000 Carya illinoinensis HOM05D006478 ORTHO05D008071 5.3e-53 211.5 173 67.6
CANSAT56G4273 Cannabis sativa HOM05D006478 ORTHO05D008071 1.3e-51 206.8 173 64.2
QL09p018992 Quercus lobata HOM05D006478 ORTHO05D008071 4.9e-51 204.9 172 64.5
TWI23G1172 Tripterygium wilfordii HOM05D006478 ORTHO05D008071 4.6e-49 198.4 170 61.8
Cfa008204 Carpinus fangiana HOM05D006478 ORTHO05D008071 7.9e-49 197.6 173 62.4
Potri.012G127100 Populus trichocarpa HOM05D006478 ORTHO05D008071 1.3e-48 196.8 170 58.8
Sabra12G0096300 Salix brachista HOM05D006478 ORTHO05D008071 5.1e-48 194.9 170 58.2
Actinidia31787 Actinidia chinensis HOM05D006478 ORTHO05D008071 4.3e-47 191.8 175 58.9
Atru.chr1.683 Acer truncatum HOM05D006478 ORTHO05D008071 5.6e-47 191.4 174 62.1
Ciclev10006041m.g Citrus clementina HOM05D006478 ORTHO05D008071 5.6e-47 191.4 174 59.8
Sed0002492 Sechium edule HOM05D006478 ORTHO05D008071 4.8e-46 188.3 173 57.2
CSS0006490 Camellia sinensis var. sinensis HOM05D006478 ORTHO05D008071 1.4e-45 186.8 176 57.4
Manes.14G035000 Manihot esculenta HOM05D006478 ORTHO05D008071 5.3e-45 184.9 167 59.3
PGR042G2342 Punica granatum HOM05D006478 ORTHO05D008071 3.4e-44 182.2 173 56.6
CSS0007785 Camellia sinensis var. sinensis HOM05D006478 ORTHO05D008071 4.5e-44 181.8 176 56.8
MELO3C006818.2 Cucumis melo HOM05D006478 ORTHO05D008071 4.5e-44 181.8 173 54.9
Dinv22954 Davidia involucrata HOM05D006478 ORTHO05D008071 4.5e-44 181.8 175 57.7
CsaV3_3G016200 Cucumis sativus L. HOM05D006478 ORTHO05D008071 1.3e-43 180.3 173 54.9
Eucgr.A02884 Eucalyptus grandis HOM05D006478 ORTHO05D008071 8.4e-43 177.6 173 56.6
ClCG02G008790 Citrullus lanatus HOM05D003975 ORTHO05D008071 2.4e-42 176.0 171 53.8
MSTRG.8414 Avicennia marina HOM05D006478 ORTHO05D008071 5.5e-42 174.9 173 53.8
DCAR_018100 Daucus carota HOM05D006478 ORTHO05D008071 5.5e-42 174.9 173 54.9
GSVIVG01018613001 Vitis vinifera HOM05D006478 ORTHO05D008071 7.1e-42 174.5 175 55.4
Dinv28557 Davidia involucrata HOM05D000120 ORTHO05D000068 2.1e-41 172.9 164 57.9
Nn6g34073 Nelumbo nucifera HOM05D006478 ORTHO05D008071 6.0e-41 171.4 178 51.1
DCAR_028724 Daucus carota HOM05D006478 ORTHO05D008071 1.0e-40 170.6 175 54.9
THA.LOC104811518 Tarenaya hassleriana HOM05D006478 ORTHO05D008071 1.0e-40 170.6 170 53.5
Migut.O00298 Erythranthe guttata HOM05D006478 ORTHO05D008071 1.8e-40 169.9 171 54.4
Lsat_1_v5_gn_8_8920 Lactuca sativa HOM05D006478 ORTHO05D008071 3.0e-40 169.1 173 53.2
EL10Ac3g05828 Beta vulgaris HOM05D006478 ORTHO05D008071 5.1e-40 168.3 175 52.0
AUR62015523 Chenopodium quinoa HOM05D006478 ORTHO05D008071 6.7e-40 167.9 175 52.0
Cc07_g16780 Coffea canephora HOM05D006478 ORTHO05D008071 6.7e-40 167.9 165 55.2
TAR629G1779 Trochodendron aralioides HOM05D006478 ORTHO05D008071 6.7e-40 167.9 183 52.5
RcHm_v2.0_Chr4g0409771 Rosa chinensis HOM05D006478 ORTHO05D008071 1.9e-39 166.4 108 80.6
AUR62002188 Chenopodium quinoa HOM05D006478 ORTHO05D008071 4.3e-39 165.2 175 52.6
PSO782G1599 Papaver somniferum HOM05D006478 ORTHO05D008071 6.2e-38 161.4 164 52.4
Haze_13851 Corylus avellana HOM05D006478 ORTHO05D008071 8.2e-38 161.0 173 56.6
PSO170G1682 Papaver somniferum HOM05D006478 ORTHO05D008071 8.2e-38 161.0 164 52.4
HanXRQChr13g0420601 Helianthus annuus HOM05D006478 ORTHO05D008071 1.4e-37 160.2 173 50.3
ECA233G2919 Erigeron canadensis HOM05D006478 ORTHO05D008071 9.0e-37 157.5 173 50.9
Os10g0508600 Oryza sativa ssp. japonica HOM05D006478 ORTHO05D008071 9.0e-37 157.5 173 50.3
Nitab4.5_0001383g0120 Nicotiana tabacum HOM05D006478 ORTHO05D008071 1.5e-36 156.8 171 50.3
SalBow5G3546 Salvia bowleyana HOM05D006478 ORTHO05D008071 7.6e-36 154.5 173 48.6
SalBow5G4313 Salvia bowleyana HOM05D006478 ORTHO05D008071 7.6e-36 154.5 173 48.6
Hma1.2p1_0146F.1_g065730 Hydrangea macrophylla HOM05D006478 ORTHO05D008071 1.7e-35 153.3 175 50.9
vmacro09898 Vaccinium macrocarpon HOM05D006478 ORTHO05D008071 2.2e-35 152.9 144 56.9
CAN.G645.17 Capsicum annuum HOM05D006478 ORTHO05D008071 1.4e-34 150.2 173 47.4
Zm00001eb043910 Zea mays HOM05D006478 ORTHO05D008071 1.4e-34 150.2 172 46.5
Sc19g0001980 Simmondsia chinensis HOM05D006478 ORTHO05D008071 7.9e-33 144.4 173 46.8
Sopen11g002780 Solanum pennellii HOM05D006478 ORTHO05D008071 1.0e-32 144.1 173 46.8
Atru.chr12.858 Acer truncatum HOM05D006478 ORTHO05D008071 1.3e-32 143.7 125 63.2
Sp6g13670 Schrenkiella parvula HOM05D006478 ORTHO05D008071 3.0e-32 142.5 173 48.0
Thhalv10014843m.g Eutrema salsugineum HOM05D006478 ORTHO05D008071 6.7e-32 141.4 173 45.7
Psat2g100400 Pisum sativum HOM05D006478 ORTHO05D008071 8.7e-32 141.0 181 45.9
SGA_v2.0_scaffold10G05491 Striga asiatica HOM05D006478 ORTHO05D008071 5.7e-31 138.3 173 44.5
Glyma.18G235100 Glycine max HOM05D006478 ORTHO05D008071 7.4e-31 137.9 181 43.1
Gohir.A01G099000 Gossypium hirsutum HOM05D006478 ORTHO05D008071 2.8e-30 136.0 174 48.9
ECA247G1821 Erigeron canadensis HOM05D006478 ORTHO05D008071 3.7e-30 135.6 173 46.2
Glyma.09G257500 Glycine max HOM05D006478 ORTHO05D008071 8.2e-30 134.4 216 37.0
Gohir.D01G083500 Gossypium hirsutum HOM05D006478 ORTHO05D008071 1.8e-29 133.3 174 48.3
Gorai.002G109200 Gossypium raimondii HOM05D006478 ORTHO05D008071 1.8e-29 133.3 174 48.3
CARHR264290 Cardamine hirsuta HOM05D006478 ORTHO05D008071 2.4e-29 132.9 173 43.4
Hma1.2p1_0654F.1_g196670 Hydrangea macrophylla HOM05D006478 ORTHO05D008071 5.3e-29 131.7 178 46.1
arahy.Tifrunner.gnm1.ann1.R2ZWGQ Arachis hypogaea HOM05D006478 ORTHO05D008071 6.9e-29 131.3 181 43.6
Duzib213G0671 Durio zibethinus HOM05D006478 ORTHO05D008071 6.9e-29 131.3 174 46.0
Phvul.011G177900 Phaseolus vulgaris HOM05D006478 ORTHO05D008071 9.0e-29 131.0 181 40.9
AL8G25810 Arabidopsis lyrata HOM05D006478 ORTHO05D008071 1.2e-28 130.6 173 43.4
A10p09440 Brassica napus HOM05D006478 ORTHO05D008071 1.5e-28 130.2 176 42.6
BraA10t43020Z Brassica rapa HOM05D006478 ORTHO05D008071 1.5e-28 130.2 176 42.6
Carub.0008s1155 Capsella rubella HOM05D006478 ORTHO05D008071 1.5e-28 130.2 173 42.8
AL64U10030 Arabidopsis lyrata HOM05D006478 ORTHO05D008071 2.0e-28 129.8 173 43.4
Medtr3g075310 Medicago truncatula HOM05D006478 ORTHO05D008071 2.0e-28 129.8 181 44.8
BcaB08g35507 Brassica carinata HOM05D006478 ORTHO05D008071 2.6e-28 129.4 174 42.5
BcaC04g20665 Brassica carinata HOM05D006478 ORTHO05D008071 2.6e-28 129.4 174 42.5
C09p40820 Brassica napus HOM05D006478 ORTHO05D008071 2.6e-28 129.4 174 42.5
BolC9t56962H Brassica oleracea HOM05D006478 ORTHO05D008071 2.6e-28 129.4 174 42.5
TPR.G3657 Trifolium pratense HOM05D006478 ORTHO05D008071 4.5e-28 128.6 178 43.3
AT5G51510 Arabidopsis thaliana HOM05D006478 ORTHO05D008071 1.0e-27 127.5 173 42.2
Ca_03612_v3 Cicer arietinum L. HOM05D006478 ORTHO05D008071 1.0e-27 127.5 181 40.9
Lalb_Chr19g0140371 Lupinus albus HOM05D006478 ORTHO05D008071 1.0e-27 127.5 182 41.8
Thecc.07G184100 Theobroma cacao HOM05D006478 ORTHO05D008071 2.2e-27 126.3 174 46.0
Psat3g066720 Pisum sativum HOM05D006478 ORTHO05D008071 5.0e-27 125.2 180 42.2
Lj6g0019546 Lotus japonicus HOM05D006478 ORTHO05D008071 6.5e-27 124.8 181 40.3
Peaxi162Scf00241g00526 Petunia axillaris HOM05D006478 ORTHO05D008071 6.5e-27 124.8 150 48.7
Rhsim09G0192300 Rhododendron simsii HOM05D006478 ORTHO05D008071 9.3e-26 120.9 144 50.0
Prupe.2G279400 Prunus persica HOM05D006478 ORTHO05D008071 6.1e-25 118.2 90 68.9
CDE02G0477 Ceratophyllum demersum HOM05D006478 ORTHO05D008071 3.9e-24 115.5 125 48.0
CDE11G0941 Ceratophyllum demersum HOM05D006478 ORTHO05D008071 1.5e-23 113.6 125 45.6
PGSC0003DMG400023983 Solanum tuberosum HOM05D006478 ORTHO05D008071 9.7e-23 110.9 180 41.1
arahy.Tifrunner.gnm1.ann1.LW4644 Arachis hypogaea HOM05D006478 ORTHO05D008071 1.3e-22 110.5 126 47.6
Aa31LG3G7930 Aethionema arabicum HOM05D006478 ORTHO05D008071 1.7e-22 110.2 203 36.0
Hund04605 Selenicereus undatus HOM05D006478 ORTHO05D008071 1.7e-22 110.2 137 47.4
Aqoxy3G03162 Aquilegia oxysepala HOM05D006478 ORTHO05D008071 3.7e-22 109.0 174 35.6
HPP92_021027 Vanilla planifolia HOM05D006478 ORTHO05D008071 3.7e-22 109.0 170 42.4
Sed0011118 Sechium edule HOM05D006478 ORTHO05D008071 6.9e-21 104.8 173 40.5
ATR0049G082 Amborella trichopoda HOM05D006478 ORTHO05D008071 2.0e-20 103.2 112 53.6
unitig_8.g3700 Utricularia gibba HOM05D006478 ORTHO05D008071 1.7e-19 100.1 146 41.8
CAN.G1338.3 Capsicum annuum HOM05D006478 ORTHO05D008071 5.5e-18 95.1 128 40.6
VMungo1127G0460 Vigna mungo HOM05D006478 ORTHO05D008071 1.2e-17 94.0 158 34.8
Pp3c3_28350 Physcomitrium patens HOM05D006478 ORTHO05D008071 6.1e-17 91.7 168 32.1
TAR125G0001 Trochodendron aralioides HOM05D006478 ORTHO05D008071 6.1e-17 91.7 165 36.4
Mapoly0022s0103 Marchantia polymorpha HOM05D006478 ORTHO05D008071 6.7e-16 88.2 175 33.1
CiPaw.05G217800 Carya illinoinensis HOM05D006478 ORTHO05D008071 1.5e-15 87.0 73 58.9
Solyc11g006880.3 Solanum lycopersicum HOM05D006478 ORTHO05D008071 4.4e-15 85.5 115 39.1
Manes.03G110816 Manihot esculenta HOM05D006478 ORTHO05D008071 2.4e-13 79.7 49 81.6
Lj1g0017005 Lotus japonicus HOM05D006478 ORTHO05D008071 2.9e-11 72.8 144 34.7
Oeu014948.1 Olea europaea HOM05D006478 ORTHO05D008071 9.4e-10 67.8 171 27.5
Medtr1g069420 Medicago truncatula HOM05D002356 ORTHO05D002546 1.4e-08 63.9 89 38.2
CBR_g39926 Chara braunii HOM05D006478 ORTHO05D008071 3.0e-08 62.8 191 27.7
Ca_10075_v3 Cicer arietinum L. HOM05D006478 ORTHO05D008071 8.8e-08 61.2 46 67.4
Nitab4.5_0001780g0030 Nicotiana tabacum HOM05D006478 ORTHO05D008071 1.1e-07 60.8 66 43.9
Actinidia03077 Actinidia chinensis HOM05D006478 ORTHO05D008071 1.7e-06 57.0 175 32.0


User provided reference genes

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