Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G1845 Fragaria x ananassa HOM05D006540 ORTHO05D008202 7.8e-168 594.0 358 100.0
FAN22G2305 Fragaria x ananassa HOM05D006540 ORTHO05D008202 5.6e-166 587.8 358 99.2
FvH4_4g25530 Fragaria vesca HOM05D006540 ORTHO05D008202 4.8e-165 584.7 358 98.6
FAN12G0822 Fragaria x ananassa HOM05D006540 ORTHO05D008202 4.8e-165 584.7 358 98.6
FAN07G1259 Fragaria x ananassa HOM05D006540 ORTHO05D008202 2.9e-162 575.5 358 96.1
RcHm_v2.0_Chr4g0432921 Rosa chinensis HOM05D006540 ORTHO05D008202 5.8e-155 551.2 361 89.2
MD13G1101900 Malus domestica HOM05D006540 ORTHO05D008202 2.8e-141 505.8 358 80.7
MD16G1102400 Malus domestica HOM05D006540 ORTHO05D008202 6.9e-140 501.1 358 79.9
Prupe.1G243900 Prunus persica HOM05D006540 ORTHO05D008202 2.5e-137 492.7 358 81.0
CiPaw.05G182700 Carya illinoinensis HOM05D006540 ORTHO05D008202 4.8e-125 451.8 356 69.4
ClCG05G025710 Citrullus lanatus HOM05D006540 ORTHO05D008202 1.6e-120 436.8 359 67.4
Cfa009208 Carpinus fangiana HOM05D006540 ORTHO05D008202 3.9e-119 432.2 356 66.9
Atru.chr11.2104 Acer truncatum HOM05D006540 ORTHO05D008202 2.8e-117 426.0 358 64.0
QL03p058139 Quercus lobata HOM05D006540 ORTHO05D008202 2.6e-115 419.5 412 64.6
Dinv24788 Davidia involucrata HOM05D006540 ORTHO05D008202 2.2e-114 416.4 359 70.2
Haze_12245 Corylus avellana HOM05D006540 ORTHO05D008202 1.8e-111 406.8 375 65.1
Duzib268G1404 Durio zibethinus HOM05D006540 ORTHO05D008202 8.8e-111 404.4 361 64.3
PGR102G2745 Punica granatum HOM05D006540 ORTHO05D008202 2.6e-110 402.9 358 67.3
Cpa.g.sc33.16 Carica papaya HOM05D006540 ORTHO05D008202 7.5e-110 401.4 361 64.5
Migut.K00595 Erythranthe guttata HOM05D006540 ORTHO05D008202 1.8e-108 396.7 363 59.5
Phvul.003G064400 Phaseolus vulgaris HOM05D006540 ORTHO05D008202 2.4e-108 396.4 356 61.8
SalBow2G2200 Salvia bowleyana HOM05D006540 ORTHO05D008202 5.3e-108 395.2 366 59.3
TAR622G1382 Trochodendron aralioides HOM05D006540 ORTHO05D008202 1.2e-107 394.0 360 65.0
Eucgr.B03288 Eucalyptus grandis HOM05D006540 ORTHO05D008202 3.5e-107 392.5 363 65.6
Ciclev10032003m.g Citrus clementina HOM05D006540 ORTHO05D008202 2.9e-106 389.4 357 62.7
Glyma.17G134500 Glycine max HOM05D006540 ORTHO05D008202 2.9e-106 389.4 358 64.0
Gorai.002G186600 Gossypium raimondii HOM05D006540 ORTHO05D008202 5.0e-106 388.7 361 64.5
Lj4g0023216 Lotus japonicus HOM05D006540 ORTHO05D008202 2.5e-105 386.3 357 61.3
Gohir.D01G150500 Gossypium hirsutum HOM05D006540 ORTHO05D008202 5.5e-105 385.2 361 64.3
Hma1.2p1_0223F.1_g093990 Hydrangea macrophylla HOM05D006540 ORTHO05D008202 5.5e-105 385.2 389 58.6
MSTRG.568 Avicennia marina HOM05D006540 ORTHO05D008202 7.2e-105 384.8 361 59.3
TWI18G0987 Tripterygium wilfordii HOM05D006540 ORTHO05D008202 9.4e-105 384.4 359 64.3
Manes.13G024900 Manihot esculenta HOM05D006540 ORTHO05D008202 1.6e-104 383.6 356 62.1
CANSAT35G0572 Cannabis sativa HOM05D006540 ORTHO05D008202 4.7e-104 382.1 363 65.0
Aa31LG2G5960 Aethionema arabicum HOM05D006540 ORTHO05D008202 1.0e-103 380.9 364 57.7
arahy.Tifrunner.gnm1.ann1.LD9JWE Arachis hypogaea HOM05D006540 ORTHO05D008202 3.0e-103 379.4 372 61.6
arahy.Tifrunner.gnm1.ann1.NX3C69 Arachis hypogaea HOM05D006540 ORTHO05D008202 3.0e-103 379.4 372 61.6
Cc11_g15700 Coffea canephora HOM05D006540 ORTHO05D008202 3.0e-103 379.4 369 62.6
BcaC06g33900 Brassica carinata HOM05D006540 ORTHO05D008202 2.0e-102 376.7 357 58.0
Actinidia37429 Actinidia chinensis HOM05D006540 ORTHO05D008202 7.5e-102 374.8 360 63.1
vmacro16198 Vaccinium macrocarpon HOM05D006540 ORTHO05D008202 1.3e-101 374.0 361 57.9
CARHR147570 Cardamine hirsuta HOM05D006540 ORTHO05D008202 2.2e-101 373.2 363 60.1
Sp2g15690 Schrenkiella parvula HOM05D006540 ORTHO05D008202 3.7e-101 372.5 364 59.1
Thhalv10004491m.g Eutrema salsugineum HOM05D006540 ORTHO05D008202 6.3e-101 371.7 365 57.5
A06p41910 Brassica napus HOM05D006540 ORTHO05D008202 1.1e-100 370.9 361 58.7
BraA06t27110Z Brassica rapa HOM05D006540 ORTHO05D008202 1.1e-100 370.9 361 58.7
C07p35560 Brassica napus HOM05D006540 ORTHO05D008202 1.8e-100 370.2 357 56.9
BolC7t44080H Brassica oleracea HOM05D006540 ORTHO05D008202 1.8e-100 370.2 357 56.9
Oeu059907.1 Olea europaea HOM05D006540 ORTHO05D008202 4.1e-100 369.0 372 56.7
AL5G15370 Arabidopsis lyrata HOM05D006540 ORTHO05D008202 7.0e-100 368.2 361 59.6
Lj6A811T79 Lonicera japonica HOM05D006540 ORTHO05D008202 7.0e-100 368.2 357 61.1
AT3G26580 Arabidopsis thaliana HOM05D006540 ORTHO05D008202 1.6e-99 367.1 362 58.8
PGSC0003DMG400018605 Solanum tuberosum HOM05D006540 ORTHO05D008202 2.3e-98 363.2 368 59.8
Thecc.02G259400 Theobroma cacao HOM05D006540 ORTHO05D008202 1.5e-97 360.5 360 63.1
Rhsim12G0110600 Rhododendron simsii HOM05D006540 ORTHO05D008202 4.2e-97 359.0 365 60.5
Sabra13G0070200 Salix brachista HOM05D006540 ORTHO05D008202 5.5e-97 358.6 293 68.9
THA.LOC104825662 Tarenaya hassleriana HOM05D006540 ORTHO05D008202 5.5e-97 358.6 361 59.0
vmacro01127 Vaccinium macrocarpon HOM05D006540 ORTHO05D008202 1.6e-96 357.1 360 58.9
Potri.013G090000 Populus trichocarpa HOM05D006540 ORTHO05D008202 4.7e-96 355.5 292 68.8
Duzib248G0112 Durio zibethinus HOM05D006540 ORTHO05D008202 6.1e-96 355.1 363 60.9
Sc04g0009450 Simmondsia chinensis HOM05D006540 ORTHO05D008202 6.1e-96 355.1 360 64.4
Lalb_Chr05g0228421 Lupinus albus HOM05D006540 ORTHO05D008202 1.4e-95 354.0 356 59.6
COL.COLO4_24263 Corchorus olitorius HOM05D006540 ORTHO05D008202 1.8e-95 353.6 357 57.4
Actinidia15092 Actinidia chinensis HOM05D006540 ORTHO05D008202 6.8e-95 351.7 360 60.6
Ca_22583_v3 Cicer arietinum L. HOM05D006540 ORTHO05D008202 8.9e-95 351.3 357 61.3
Nitab4.5_0000007g0060 Nicotiana tabacum HOM05D006540 ORTHO05D008202 1.2e-94 350.9 366 57.1
Peaxi162Scf00128g00138 Petunia axillaris HOM05D006540 ORTHO05D008202 3.4e-94 349.4 372 57.8
BcaC06g31063 Brassica carinata HOM05D006540 ORTHO05D008202 4.4e-94 349.0 362 56.6
Aqoxy3G01202 Aquilegia oxysepala HOM05D006540 ORTHO05D008202 1.3e-93 347.4 358 58.4
Gohir.A01G159600 Gossypium hirsutum HOM05D006540 ORTHO05D008202 2.2e-93 346.7 361 60.1
Medtr8g069450 Medicago truncatula HOM05D006540 ORTHO05D008202 2.2e-93 346.7 360 57.2
Nitab4.5_0003628g0010 Nicotiana tabacum HOM05D006540 ORTHO05D008202 8.3e-93 344.7 366 57.1
DCAR_024432 Daucus carota HOM05D006540 ORTHO05D008202 5.4e-92 342.0 336 58.6
Psat4g116680 Pisum sativum HOM05D006540 ORTHO05D008202 5.4e-92 342.0 365 57.5
Sopen05g008320 Solanum pennellii HOM05D006540 ORTHO05D008202 7.0e-92 341.7 366 57.7
Carub.0005s0457 Capsella rubella HOM05D006540 ORTHO05D008202 9.2e-92 341.3 362 56.4
CSS0000303 Camellia sinensis var. sinensis HOM05D006540 ORTHO05D008202 3.3e-89 332.8 369 58.0
CAN.G832.5 Capsicum annuum HOM05D006540 ORTHO05D008202 1.2e-88 330.9 368 56.5
EL10Ac6g13801 Beta vulgaris HOM05D006540 ORTHO05D008202 4.7e-88 328.9 360 55.3
Ah.03g133040 Amaranthus hybridus HOM05D006540 ORTHO05D008202 1.5e-86 323.9 245 68.2
ATR0686G190 Amborella trichopoda HOM05D006540 ORTHO05D008202 7.5e-86 321.6 284 61.3
Nn4g22628 Nelumbo nucifera HOM05D006540 ORTHO05D008202 9.8e-86 321.2 182 83.5
ECA233G5619 Erigeron canadensis HOM05D006540 ORTHO05D008202 6.4e-85 318.5 254 66.9
CDE09G1037 Ceratophyllum demersum HOM05D006540 ORTHO05D008202 8.3e-85 318.2 356 52.5
GSVIVG01004073001 Vitis vinifera HOM05D006540 ORTHO05D008202 8.3e-85 318.2 183 82.0
CDE02G2769 Ceratophyllum demersum HOM05D006540 ORTHO05D008202 1.1e-84 317.8 243 65.8
Lsat_1_v5_gn_8_152220 Lactuca sativa HOM05D006540 ORTHO05D008202 1.8e-84 317.0 368 56.2
unitig_21.g20872 Utricularia gibba HOM05D006540 ORTHO05D008202 1.7e-82 310.5 363 50.4
PSO017G4849 Papaver somniferum HOM05D006540 ORTHO05D008202 2.3e-82 310.1 380 50.0
AUR62024282 Chenopodium quinoa HOM05D006540 ORTHO05D008202 2.8e-80 303.1 208 72.1
HanXRQChr08g0208131 Helianthus annuus HOM05D006540 ORTHO05D008202 4.7e-80 302.4 370 54.6
Rhsim12G0041000 Rhododendron simsii HOM05D006540 ORTHO05D008202 8.0e-80 301.6 439 48.1
AUR62005459 Chenopodium quinoa HOM05D006540 ORTHO05D008202 7.5e-78 295.0 228 66.7
MBI10_g13027_MAGBIO Magnolia biondii HOM05D006540 ORTHO05D008202 2.9e-77 293.1 393 53.4
VMungo0251G1250 Vigna mungo HOM05D006540 ORTHO05D008202 1.4e-76 290.8 290 59.7
PSO478G4529 Papaver somniferum HOM05D006540 ORTHO05D008202 7.0e-76 288.5 359 50.4
Sed0005489 Sechium edule HOM05D006540 ORTHO05D008202 3.9e-74 282.7 289 62.6
TPR.G17765 Trifolium pratense HOM05D006540 ORTHO05D008202 1.9e-73 280.4 332 56.6
MELO3C011955.2 Cucumis melo HOM05D006540 ORTHO05D008202 8.9e-71 271.6 295 58.0
CsaV3_5G031170 Cucumis sativus L. HOM05D006540 ORTHO05D008202 2.0e-70 270.4 295 57.6
HPP92_002022 Vanilla planifolia HOM05D006540 ORTHO05D008202 3.7e-69 266.2 247 57.1
BcaB01g00564 Brassica carinata HOM05D006540 ORTHO05D008202 6.0e-67 258.8 234 60.3
Zm00001eb096140 Zea mays HOM05D006540 ORTHO05D008202 4.2e-60 236.1 250 55.6
Os03g0428800 Oryza sativa ssp. japonica HOM05D006540 ORTHO05D008202 6.0e-59 232.3 185 62.2
TAR374G0845 Trochodendron aralioides HOM05D006540 ORTHO05D008202 2.3e-58 230.3 288 56.9
SEGI_37038 Sequoiadendron giganteum HOM05D006540 ORTHO05D008202 6.4e-53 212.2 175 57.7
Mapoly0037s0067 Marchantia polymorpha HOM05D006540 ORTHO05D008202 8.7e-50 201.8 300 44.3
AagrBONN_evm.TU.Sc2ySwM_340.367 Anthoceros agrestis HOM05D006540 ORTHO05D008202 1.5e-49 201.1 244 45.5
SMO347G0417 Selaginella moellendorffii HOM05D006540 ORTHO05D008202 2.8e-48 196.8 249 47.8
Pp3c27_6670 Physcomitrium patens HOM05D006540 ORTHO05D008202 2.1e-43 180.6 185 46.5
BcaC06g33898 Brassica carinata HOM05D006540 ORTHO05D008202 1.4e-23 114.8 80 62.5
Cre12.g528050 Chlamydomonas reinhardtii HOM05D006540 ORTHO05D008202 2.5e-20 104.0 112 45.5
Oeu029879.1 Olea europaea HOM05D006540 ORTHO05D008202 3.6e-19 100.1 74 60.8
CBR_g8379 Chara braunii HOM05D006540 ORTHO05D008202 2.0e-17 94.4 133 39.1
RcHm_v2.0_Chr5g0067811 Rosa chinensis HOM05D006540 ORTHO05D008202 7.4e-17 92.4 48 91.7
MCO07G599 Micromonas commoda HOM05D006540 ORTHO05D008202 1.3e-16 91.7 153 36.6
PRCOL_00004949 Prasinoderma coloniale HOM05D006540 ORTHO05D008202 5.5e-12 76.3 233 29.2
QL04p066147 Quercus lobata HOM05D006540 ORTHO05D008202 1.4e-10 71.6 38 89.5
unitig_744.g24293 Utricularia gibba HOM05D006540 ORTHO05D008202 4.4e-09 66.6 44 63.6
TAR625G0150 Trochodendron aralioides HOM05D006540 ORTHO05D008202 7.7e-06 55.8 106 39.6


User provided reference genes

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