Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G1814 Fragaria x ananassa HOM05D003867 ORTHO05D004593 5.8e-214 747.3 375 100.0
FAN12G0392 Fragaria x ananassa HOM05D003867 ORTHO05D004593 1.5e-201 706.1 375 96.3
FAN22G0799 Fragaria x ananassa HOM05D003867 ORTHO05D004593 1.6e-200 702.6 375 95.7
FvH4_4g24110 Fragaria vesca HOM05D003867 ORTHO05D004593 2.6e-198 695.3 486 76.7
FAN07G1251 Fragaria x ananassa HOM05D003867 ORTHO05D004593 3.8e-197 691.4 375 94.4
RcHm_v2.0_Chr4g0430891 Rosa chinensis HOM05D003867 ORTHO05D004593 9.6e-193 676.8 486 74.5
MD13G1115400 Malus domestica HOM05D003867 ORTHO05D004593 4.5e-190 667.9 486 72.4
Prupe.1G231900 Prunus persica HOM05D003867 ORTHO05D004593 3.8e-189 664.8 486 72.8
MD16G1115300 Malus domestica HOM05D003867 ORTHO05D004593 1.9e-188 662.5 486 72.6
COL.COLO4_12823 Corchorus olitorius HOM05D003867 ORTHO05D004593 8.7e-186 653.7 486 70.0
Gohir.A12G147700 Gossypium hirsutum HOM05D003867 ORTHO05D004593 1.1e-185 653.3 486 69.3
Gorai.001G109800 Gossypium raimondii HOM05D003867 ORTHO05D004593 1.9e-185 652.5 486 70.4
CSS0021164 Camellia sinensis var. sinensis HOM05D003867 ORTHO05D004593 2.5e-185 652.1 486 70.4
Gohir.D12G152000 Gossypium hirsutum HOM05D003867 ORTHO05D004593 2.5e-185 652.1 486 70.4
Gorai.008G164400 Gossypium raimondii HOM05D003867 ORTHO05D004593 4.3e-185 651.4 485 70.5
HanXRQChr09g0255191 Helianthus annuus HOM05D003867 ORTHO05D004593 7.4e-185 650.6 480 71.0
Gohir.D07G101900 Gossypium hirsutum HOM05D003867 ORTHO05D004593 9.7e-185 650.2 486 70.2
Lsat_1_v5_gn_4_184020 Lactuca sativa HOM05D003867 ORTHO05D004593 9.7e-185 650.2 485 71.8
Duzib268G1394 Durio zibethinus HOM05D003867 ORTHO05D004593 1.3e-184 649.8 486 70.2
arahy.Tifrunner.gnm1.ann1.VZW0IR Arachis hypogaea HOM05D003867 ORTHO05D004593 2.8e-184 648.7 485 70.5
Thecc.02G275800 Theobroma cacao HOM05D003867 ORTHO05D004593 2.8e-184 648.7 486 70.2
Migut.E00031 Erythranthe guttata HOM05D003867 ORTHO05D004593 6.3e-184 647.5 486 70.6
Peaxi162Scf00128g01017 Petunia axillaris HOM05D003867 ORTHO05D004593 6.3e-184 647.5 485 70.5
Medtr1g042300 Medicago truncatula HOM05D003867 ORTHO05D004593 8.2e-184 647.1 482 71.0
CSS0008021 Camellia sinensis var. sinensis HOM05D003867 ORTHO05D004593 1.1e-183 646.7 486 69.5
Duzib251G0884 Durio zibethinus HOM05D003867 ORTHO05D004593 1.4e-183 646.4 486 69.5
Gohir.A07G097600 Gossypium hirsutum HOM05D003867 ORTHO05D004593 5.3e-183 644.4 486 68.9
Psat6g040120 Pisum sativum HOM05D003867 ORTHO05D004593 5.3e-183 644.4 482 70.5
PGSC0003DMG400001292 Solanum tuberosum HOM05D003867 ORTHO05D004593 5.3e-183 644.4 486 70.0
Lj6g0022289 Lotus japonicus HOM05D003867 ORTHO05D004593 6.9e-183 644.0 482 70.7
Solyc02g087240.4 Solanum lycopersicum HOM05D003867 ORTHO05D004593 6.9e-183 644.0 486 70.0
Sopen02g031980 Solanum pennellii HOM05D003867 ORTHO05D004593 6.9e-183 644.0 486 70.0
Duzib248G0225 Durio zibethinus HOM05D003867 ORTHO05D004593 1.5e-182 642.9 486 69.5
Lalb_Chr03g0037281 Lupinus albus HOM05D003867 ORTHO05D004593 1.5e-182 642.9 483 70.2
C03p04400 Brassica napus HOM05D003867 ORTHO05D004593 2.0e-182 642.5 486 71.2
ECA232G3717 Erigeron canadensis HOM05D003867 ORTHO05D004593 2.0e-182 642.5 483 69.6
Nitab4.5_0000271g0190 Nicotiana tabacum HOM05D003867 ORTHO05D004593 2.0e-182 642.5 485 69.9
TPR.G25178 Trifolium pratense HOM05D003867 ORTHO05D004593 2.6e-182 642.1 482 70.1
CARHR204460 Cardamine hirsuta HOM05D003867 ORTHO05D004593 3.4e-182 641.7 486 71.0
Carub.0006s0748 Capsella rubella HOM05D003867 ORTHO05D004593 4.5e-182 641.3 486 71.2
Ca_12000_v3 Cicer arietinum L. HOM05D003867 ORTHO05D004593 4.5e-182 641.3 482 70.1
CANSAT64G1093 Cannabis sativa HOM05D003867 ORTHO05D004593 5.9e-182 641.0 483 69.8
Haze_12379 Corylus avellana HOM05D003867 ORTHO05D004593 5.9e-182 641.0 485 69.9
Aa31LG3G18010 Aethionema arabicum HOM05D003867 ORTHO05D004593 7.7e-182 640.6 486 70.6
DCAR_007011 Daucus carota HOM05D003867 ORTHO05D004593 7.7e-182 640.6 486 70.0
CiPaw.05G113400 Carya illinoinensis HOM05D003867 ORTHO05D004593 1.0e-181 640.2 487 69.6
Lalb_Chr01g0021001 Lupinus albus HOM05D003867 ORTHO05D004593 1.3e-181 639.8 483 70.2
QL03p054504 Quercus lobata HOM05D003867 ORTHO05D004593 1.7e-181 639.4 486 70.4
TAR374G1237 Trochodendron aralioides HOM05D003867 ORTHO05D004593 2.9e-181 638.6 486 70.2
AT5G08530 Arabidopsis thaliana HOM05D003867 ORTHO05D004593 3.8e-181 638.3 486 70.8
Sed0026140 Sechium edule HOM05D003867 ORTHO05D004593 3.8e-181 638.3 486 69.3
A10p28200 Brassica napus HOM05D003867 ORTHO05D004593 5.0e-181 637.9 486 70.6
Sp6g34370 Schrenkiella parvula HOM05D003867 ORTHO05D004593 6.5e-181 637.5 486 70.6
TWI36G0688 Tripterygium wilfordii HOM05D003867 ORTHO05D004593 6.5e-181 637.5 486 68.7
BcaB01g05588 Brassica carinata HOM05D003867 ORTHO05D004593 8.5e-181 637.1 486 70.8
Manes.12G014300 Manihot esculenta HOM05D003867 ORTHO05D004593 8.5e-181 637.1 486 68.7
Thhalv10013394m.g Eutrema salsugineum HOM05D003867 ORTHO05D004593 1.1e-180 636.7 486 70.4
Sabra10G0047900 Salix brachista HOM05D003867 ORTHO05D004593 1.1e-180 636.7 485 68.7
AL6G19230 Arabidopsis lyrata HOM05D003867 ORTHO05D004593 1.4e-180 636.3 486 70.8
BraA10t44869Z Brassica rapa HOM05D003867 ORTHO05D004593 1.9e-180 636.0 485 70.5
Nn3g16522 Nelumbo nucifera HOM05D003867 ORTHO05D004593 1.9e-180 636.0 486 69.5
Nn4g22382 Nelumbo nucifera HOM05D003867 ORTHO05D004593 1.9e-180 636.0 486 69.8
Hund25446 Selenicereus undatus HOM05D003867 ORTHO05D004593 1.9e-180 636.0 483 69.2
Rhsim12G0153900 Rhododendron simsii HOM05D003867 ORTHO05D004593 3.2e-180 635.2 486 68.9
EL10Ac6g13463 Beta vulgaris HOM05D003867 ORTHO05D004593 4.2e-180 634.8 484 69.6
DCAR_031187 Daucus carota HOM05D003867 ORTHO05D004593 4.2e-180 634.8 485 69.7
Potri.010G057400 Populus trichocarpa HOM05D003867 ORTHO05D004593 4.2e-180 634.8 486 68.5
BolC9t59588H Brassica oleracea HOM05D003867 ORTHO05D004593 7.2e-180 634.0 485 70.3
Glyma.10G005500 Glycine max HOM05D003867 ORTHO05D004593 7.2e-180 634.0 482 69.5
BolC3t12971H Brassica oleracea HOM05D003867 ORTHO05D004593 1.6e-179 632.9 483 70.6
HanXRQChr15g0486841 Helianthus annuus HOM05D003867 ORTHO05D004593 1.6e-179 632.9 480 69.6
A03p03890 Brassica napus HOM05D003867 ORTHO05D004593 2.1e-179 632.5 487 69.6
Glyma.02G003300 Glycine max HOM05D003867 ORTHO05D004593 2.1e-179 632.5 482 69.5
Cpa.g.sc257.6 Carica papaya HOM05D003867 ORTHO05D004593 2.7e-179 632.1 486 68.1
CDE09G0709 Ceratophyllum demersum HOM05D003867 ORTHO05D004593 3.6e-179 631.7 486 68.9
MELO3C009702.2 Cucumis melo HOM05D003867 ORTHO05D004593 3.6e-179 631.7 486 68.3
CsaV3_3G039600 Cucumis sativus L. HOM05D003867 ORTHO05D004593 3.6e-179 631.7 486 68.5
MSTRG.7988 Avicennia marina HOM05D003867 ORTHO05D004593 6.1e-179 630.9 486 69.8
TWI75G1178 Tripterygium wilfordii HOM05D003867 ORTHO05D004593 6.1e-179 630.9 486 66.9
Aqoxy3G01483 Aquilegia oxysepala HOM05D003867 ORTHO05D004593 7.9e-179 630.6 486 69.8
CAN.G206.61 Capsicum annuum HOM05D003867 ORTHO05D004593 7.9e-179 630.6 485 69.1
Oeu020305.1 Olea europaea HOM05D003867 ORTHO05D004593 7.9e-179 630.6 486 69.1
vmacro15114 Vaccinium macrocarpon HOM05D003867 ORTHO05D004593 7.9e-179 630.6 486 67.7
BcaB08g37249 Brassica carinata HOM05D003867 ORTHO05D004593 1.0e-178 630.2 486 70.2
Peaxi162Scf00449g00825 Petunia axillaris HOM05D003867 ORTHO05D004593 1.0e-178 630.2 479 69.5
C09p68410 Brassica napus HOM05D003867 ORTHO05D004593 1.4e-178 629.8 488 70.1
BraA03t09737Z Brassica rapa HOM05D003867 ORTHO05D004593 1.8e-178 629.4 484 70.7
PGR119G1061 Punica granatum HOM05D003867 ORTHO05D004593 1.8e-178 629.4 491 68.2
Phvul.007G274700 Phaseolus vulgaris HOM05D003867 ORTHO05D004593 2.3e-178 629.0 475 70.7
Hund06074 Selenicereus undatus HOM05D003867 ORTHO05D004593 2.3e-178 629.0 485 68.5
THA.LOC104819362 Tarenaya hassleriana HOM05D003867 ORTHO05D004593 1.1e-177 626.7 486 69.1
VMungo0720G1468 Vigna mungo HOM05D003867 ORTHO05D004593 1.5e-177 626.3 491 69.7
Oeu019042.1 Olea europaea HOM05D003867 ORTHO05D004593 5.7e-177 624.4 486 68.7
ClCG02G006860 Citrullus lanatus HOM05D003867 ORTHO05D004593 7.4e-177 624.0 486 67.5
PSO063G4816 Papaver somniferum HOM05D003867 ORTHO05D004593 6.3e-176 620.9 487 68.2
Zm00001eb329270 Zea mays HOM05D003867 ORTHO05D004593 6.3e-176 620.9 486 70.4
Eucgr.H04659 Eucalyptus grandis HOM05D003867 ORTHO05D004593 1.8e-175 619.4 486 68.1
SGA_v2.0_scaffold347G49568 Striga asiatica HOM05D003867 ORTHO05D004593 1.8e-175 619.4 486 68.5
SGA_v2.0_scaffold63G21760 Striga asiatica HOM05D003867 ORTHO05D004593 1.8e-175 619.4 486 68.5
MBI11_g06772_MAGBIO Magnolia biondii HOM05D003867 ORTHO05D004593 2.4e-175 619.0 484 67.8
PSO782G1516 Papaver somniferum HOM05D003867 ORTHO05D004593 2.4e-175 619.0 487 68.2
THA.LOC104818400 Tarenaya hassleriana HOM05D003867 ORTHO05D004593 5.3e-175 617.8 486 68.7
ATR0564G372 Amborella trichopoda HOM05D003867 ORTHO05D004593 3.4e-174 615.1 483 67.1
Ah.03g133960 Amaranthus hybridus HOM05D003867 ORTHO05D004593 7.7e-174 614.0 482 67.4
Sc04g0010000 Simmondsia chinensis HOM05D003867 ORTHO05D004593 1.0e-173 613.6 479 68.9
Rhsim12G0103900 Rhododendron simsii HOM05D003867 ORTHO05D004593 2.9e-173 612.1 464 69.2
ATR0665G595 Amborella trichopoda HOM05D003867 ORTHO05D004593 5.0e-173 611.3 483 67.1
Zm00001eb110430 Zea mays HOM05D003867 ORTHO05D004593 5.0e-173 611.3 459 71.7
SEGI_02035 Sequoiadendron giganteum HOM05D003867 ORTHO05D004593 1.9e-172 609.4 483 67.9
Os07g0645400 Oryza sativa ssp. japonica HOM05D003867 ORTHO05D004593 2.5e-172 609.0 456 71.7
Ciclev10033600m.g Citrus clementina HOM05D003867 ORTHO05D004593 6.1e-171 604.4 452 69.9
Cc11_g16710 Coffea canephora HOM05D003867 ORTHO05D004593 7.4e-169 597.4 460 69.1
SMO141G0212 Selaginella moellendorffii HOM05D003867 ORTHO05D004593 8.0e-163 577.4 452 66.8
Pp3c12_4050 Physcomitrium patens HOM05D003867 ORTHO05D004593 2.0e-161 572.8 484 64.7
HanXRQChr15g0475281 Helianthus annuus HOM05D003867 ORTHO05D004593 7.4e-161 570.9 480 61.7
Pp3c4_17990 Physcomitrium patens HOM05D003867 ORTHO05D004593 1.3e-160 570.1 430 67.9
CDE02G4050 Ceratophyllum demersum HOM05D003867 ORTHO05D004593 4.8e-160 568.2 441 68.5
AagrBONN_evm.TU.Sc2ySwM_117.2067 Anthoceros agrestis HOM05D003867 ORTHO05D004593 8.2e-160 567.4 430 66.5
CBR_g4558 Chara braunii HOM05D003867 ORTHO05D004593 1.6e-158 563.1 434 66.1
Mapoly0052s0094 Marchantia polymorpha HOM05D003867 ORTHO05D004593 3.5e-158 562.0 438 66.0
Lsat_1_v5_gn_0_47760 Lactuca sativa HOM05D003867 ORTHO05D004593 2.9e-157 558.9 431 65.0
arahy.Tifrunner.gnm1.ann1.IM3BGM Arachis hypogaea HOM05D003867 ORTHO05D004593 1.6e-155 553.1 407 69.8
CiPaw.06G100100 Carya illinoinensis HOM05D003867 ORTHO05D004593 5.2e-154 548.1 407 69.0
AUR62024144 Chenopodium quinoa HOM05D003867 ORTHO05D004593 7.0e-151 537.7 406 67.7
AUR62005586 Chenopodium quinoa HOM05D003867 ORTHO05D004593 2.0e-150 536.2 405 67.7
Actinidia08082 Actinidia chinensis HOM05D003867 ORTHO05D004593 7.7e-150 534.3 298 87.6
unitig_21.g20878 Utricularia gibba HOM05D003867 ORTHO05D004593 7.7e-150 534.3 407 67.3
MCO16G634 Micromonas commoda HOM05D003867 ORTHO05D004593 5.0e-149 531.6 433 63.0
SGA_v2.0_scaffold1484G53963 Striga asiatica HOM05D003867 ORTHO05D004593 1.6e-147 526.6 298 88.9
unitig_744.g24299 Utricularia gibba HOM05D003867 ORTHO05D004593 1.0e-146 523.9 297 88.6
Dinv39063 Davidia involucrata HOM05D003867 ORTHO05D004593 4.0e-146 521.9 276 89.9
CBR_g30767 Chara braunii HOM05D003867 ORTHO05D004593 4.5e-142 508.4 421 60.8
Cre10.g422600 Chlamydomonas reinhardtii HOM05D003867 ORTHO05D004593 7.7e-142 507.7 435 59.8
PRCOL_00003927 Prasinoderma coloniale HOM05D003867 ORTHO05D004593 9.5e-140 500.7 427 60.2
Sed0024813 Sechium edule HOM05D003867 ORTHO05D004593 2.1e-139 499.6 468 60.7
Dinv37748 Davidia involucrata HOM05D003867 ORTHO05D004593 3.0e-138 495.7 384 67.4
TAR629G2520 Trochodendron aralioides HOM05D003867 ORTHO05D004593 3.6e-115 419.1 203 97.0
Haze_26697 Corylus avellana HOM05D003867 ORTHO05D004593 1.7e-112 410.2 395 52.9
Nn7g37842 Nelumbo nucifera HOM05D003867 ORTHO05D004593 2.1e-107 393.3 346 61.3
Actinidia20690 Actinidia chinensis HOM05D003867 ORTHO05D004593 1.7e-104 383.6 221 83.7
Nitab4.5_0000581g0020 Nicotiana tabacum HOM05D003867 ORTHO05D004593 2.0e-97 360.1 374 54.8
HPP92_000985 Vanilla planifolia HOM05D003867 ORTHO05D004593 6.0e-94 348.6 315 60.0
Nn3g20865 Nelumbo nucifera HOM05D003867 ORTHO05D004593 1.7e-88 330.5 174 89.1
Lj6P823T18 Lonicera japonica HOM05D003867 ORTHO05D004593 8.7e-69 265.0 142 89.4
HPP92_000984 Vanilla planifolia HOM05D003867 ORTHO05D004593 3.7e-67 259.6 164 82.9
GSVIVG01020401001 Vitis vinifera HOM05D003867 ORTHO05D004593 7.9e-62 241.9 147 85.7
Haze_26928 Corylus avellana HOM05D003867 ORTHO05D004593 1.7e-56 224.2 275 45.5
Aqoxy3G01811 Aquilegia oxysepala HOM05D003867 ORTHO05D004593 3.0e-53 213.4 106 93.4
MD16G1114800 Malus domestica HOM05D003867 ORTHO05D004593 3.0e-53 213.4 100 99.0
Nn8g40622 Nelumbo nucifera HOM05D003867 ORTHO05D004593 2.0e-49 200.7 102 92.2
Actinidia09669 Actinidia chinensis HOM05D003867 ORTHO05D004593 8.5e-48 195.3 127 78.0
Aqoxy84s003 Aquilegia oxysepala HOM05D003867 ORTHO05D004593 1.0e-45 188.3 204 46.6
Potri.008G177801 Populus trichocarpa HOM05D003867 ORTHO05D004593 1.5e-36 157.9 108 70.4
TAR629G2231 Trochodendron aralioides HOM05D003867 ORTHO05D004593 6.3e-35 152.5 77 94.8
C02p03650 Brassica napus HOM05D003867 ORTHO05D004593 8.3e-35 152.1 105 73.3
CSS0023173 Camellia sinensis var. sinensis HOM05D003867 ORTHO05D004593 1.4e-34 151.4 77 93.5
BolC2t06324H Brassica oleracea HOM05D003867 ORTHO05D004593 2.4e-34 150.6 76 94.7
unitig_744.g24298 Utricularia gibba HOM05D003867 ORTHO05D004593 2.7e-33 147.1 77 90.9
FAN03G1235 Fragaria x ananassa HOM05D003867 ORTHO05D004593 1.2e-30 138.3 70 97.1
FAN15G0422 Fragaria x ananassa HOM05D003867 ORTHO05D004593 4.0e-29 133.3 69 94.2
BcaC03g13232 Brassica carinata HOM05D003867 ORTHO05D004593 2.0e-28 131.0 68 94.1
FAN07G1961 Fragaria x ananassa HOM05D003867 ORTHO05D004593 2.2e-27 127.5 65 95.4
FAN08G0425 Fragaria x ananassa HOM05D003867 ORTHO05D004593 4.9e-27 126.3 65 93.8
Actinidia09668 Actinidia chinensis HOM05D003867 ORTHO05D004593 5.4e-26 122.9 109 59.6
BcaC03g13233 Brassica carinata HOM05D003155 ORTHO05D012487 1.0e-24 118.6 293 32.4
MD16G1114900 Malus domestica HOM05D003867 ORTHO05D004593 1.7e-24 117.9 61 86.9
Pp3c3_8640 Physcomitrium patens HOM05D003867 ORTHO05D004593 8.0e-22 109.0 68 76.5
GSVIVG01013345001 Vitis vinifera HOM05D003867 ORTHO05D004593 3.0e-21 107.1 67 68.7
Atru.chr11.2285 Acer truncatum HOM05D003867 ORTHO05D004593 1.5e-20 104.8 67 71.6
Pp3c13_10840 Physcomitrium patens HOM05D003867 ORTHO05D004593 9.2e-18 95.5 48 91.7
Atru.chr11.2286 Acer truncatum HOM05D003867 ORTHO05D004593 1.6e-17 94.7 51 86.3
Hund25436 Selenicereus undatus HOM05D000424 ORTHO05D008586 1.0e-16 92.0 168 36.3
Duzib128G1406 Durio zibethinus HOM05D003867 ORTHO05D004593 2.6e-12 77.4 79 51.9
Nitab4.5_0027010g0010 Nicotiana tabacum HOM05D003867 ORTHO05D004593 1.0e-08 65.5 61 72.1
Nitab4.5_0002184g0100 Nicotiana tabacum HOM05D003867 ORTHO05D004593 3.9e-08 63.5 61 59.0
Nn1g01167 Nelumbo nucifera HOM05D003867 ORTHO05D004593 9.5e-07 58.9 32 84.4
Nn1g01168 Nelumbo nucifera HOM05D003867 ORTHO05D004593 9.5e-07 58.9 32 84.4


User provided reference genes

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