Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G1701 Fragaria x ananassa HOM05D006777 ORTHO05D008360 2.2e-91 339.0 173 100.0
FAN22G2344 Fragaria x ananassa HOM05D006777 ORTHO05D008360 8.1e-86 320.5 175 95.4
FAN07G2803 Fragaria x ananassa HOM05D006777 ORTHO05D008360 6.4e-83 310.8 189 88.4
FvH4_4g13710 Fragaria vesca HOM05D006777 ORTHO05D008360 3.0e-80 302.0 175 92.0
RcHm_v2.0_Chr4g0414361 Rosa chinensis HOM05D006777 ORTHO05D008360 1.5e-79 299.7 175 90.9
RcHm_v2.0_Chr7g0213901 Rosa chinensis HOM05D006777 ORTHO05D008360 1.5e-79 299.7 175 90.9
Glyma.08G111500 Glycine max HOM05D006777 ORTHO05D008360 3.3e-79 298.5 175 90.9
arahy.Tifrunner.gnm1.ann1.QE6BNJ Arachis hypogaea HOM05D006777 ORTHO05D008360 1.3e-78 296.6 182 87.4
Glyma.05G153800 Glycine max HOM05D006777 ORTHO05D008360 1.3e-78 296.6 175 90.3
Duzib268G0333 Durio zibethinus HOM05D006777 ORTHO05D008360 2.8e-78 295.4 175 90.3
Thecc.04G200300 Theobroma cacao HOM05D006777 ORTHO05D008360 2.8e-78 295.4 175 90.3
Ciclev10006063m.g Citrus clementina HOM05D006777 ORTHO05D008360 3.6e-78 295.0 175 88.6
arahy.Tifrunner.gnm1.ann1.GXV5N1 Arachis hypogaea HOM05D006777 ORTHO05D008360 4.8e-78 294.7 182 86.8
CiPaw.02G065600 Carya illinoinensis HOM05D006777 ORTHO05D008360 1.4e-77 293.1 175 89.7
Lj4g0000567 Lotus japonicus HOM05D006777 ORTHO05D008360 1.4e-77 293.1 175 89.1
Actinidia23410 Actinidia chinensis HOM05D006777 ORTHO05D008360 1.8e-77 292.7 175 89.1
CDE06G2004 Ceratophyllum demersum HOM05D006777 ORTHO05D008360 1.8e-77 292.7 175 88.6
Prupe.1G158800 Prunus persica HOM05D006777 ORTHO05D008360 1.8e-77 292.7 175 88.6
TAR362G0671 Trochodendron aralioides HOM05D006777 ORTHO05D008360 1.8e-77 292.7 179 87.2
Medtr8g085290 Medicago truncatula HOM05D006777 ORTHO05D008360 3.1e-77 292.0 175 89.1
MSTRG.4231 Avicennia marina HOM05D006777 ORTHO05D008360 4.0e-77 291.6 177 87.6
CANSAT78G1417 Cannabis sativa HOM05D006777 ORTHO05D008360 4.0e-77 291.6 175 89.1
Dinv38213 Davidia involucrata HOM05D006777 ORTHO05D008360 4.0e-77 291.6 175 88.6
HanXRQChr01g0022451 Helianthus annuus HOM05D006777 ORTHO05D008360 4.0e-77 291.6 175 87.4
TWI53G1099 Tripterygium wilfordii HOM05D006777 ORTHO05D008360 4.0e-77 291.6 175 88.0
CSS0000801 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 5.3e-77 291.2 175 88.0
Manes.03G146100 Manihot esculenta HOM05D006777 ORTHO05D008360 5.3e-77 291.2 175 88.6
GSVIVG01020914001 Vitis vinifera HOM05D006777 ORTHO05D008360 5.3e-77 291.2 175 88.0
Atru.chr4.1633 Acer truncatum HOM05D006777 ORTHO05D008360 6.9e-77 290.8 175 88.6
FAN12G2838 Fragaria x ananassa HOM05D006777 ORTHO05D008360 6.9e-77 290.8 175 89.1
MD04G1012700 Malus domestica HOM05D006777 ORTHO05D008360 6.9e-77 290.8 175 88.0
Os03g0848300 Oryza sativa ssp. japonica HOM05D006777 ORTHO05D008360 6.9e-77 290.8 175 87.4
Sc25g0003260 Simmondsia chinensis HOM05D006777 ORTHO05D008360 6.9e-77 290.8 175 88.0
Migut.G00716 Erythranthe guttata HOM05D006777 ORTHO05D008360 1.5e-76 289.7 175 87.4
PSO063G4325 Papaver somniferum HOM05D006777 ORTHO05D008360 2.6e-76 288.9 175 87.4
SalBow8G2353 Salvia bowleyana HOM05D006777 ORTHO05D008360 2.6e-76 288.9 175 87.4
SalBow8G2632 Salvia bowleyana HOM05D006777 ORTHO05D008360 2.6e-76 288.9 175 87.4
THA.LOC104804809 Tarenaya hassleriana HOM05D006777 ORTHO05D008360 2.6e-76 288.9 175 88.0
PSO017G6923 Papaver somniferum HOM05D006777 ORTHO05D008360 3.4e-76 288.5 175 86.9
THA.LOC104808706 Tarenaya hassleriana HOM05D006777 ORTHO05D008360 3.4e-76 288.5 175 88.0
Sopen12g033210 Solanum pennellii HOM05D006777 ORTHO05D008360 5.8e-76 287.7 175 87.4
Sed0015167 Sechium edule HOM05D006777 ORTHO05D008360 7.6e-76 287.3 175 87.4
Solyc12g098430.2 Solanum lycopersicum HOM05D006777 ORTHO05D008360 7.6e-76 287.3 175 86.9
ATR1147G041 Amborella trichopoda HOM05D006777 ORTHO05D008360 9.9e-76 287.0 175 86.3
Potri.017G057400 Populus trichocarpa HOM05D006777 ORTHO05D008360 9.9e-76 287.0 175 86.3
BcaC02g09355 Brassica carinata HOM05D006777 ORTHO05D008360 1.3e-75 286.6 175 86.9
Gohir.A02G020900 Gossypium hirsutum HOM05D006777 ORTHO05D008360 1.3e-75 286.6 173 87.9
Gohir.D02G024900 Gossypium hirsutum HOM05D006777 ORTHO05D008360 1.3e-75 286.6 173 87.9
Gorai.005G030800 Gossypium raimondii HOM05D006777 ORTHO05D008360 1.3e-75 286.6 173 87.9
Aa31LG9G3900 Aethionema arabicum HOM05D006777 ORTHO05D008360 1.7e-75 286.2 175 86.9
Psat7g074160 Pisum sativum HOM05D006777 ORTHO05D008360 1.7e-75 286.2 177 87.0
AUR62016205 Chenopodium quinoa HOM05D006777 ORTHO05D008360 2.2e-75 285.8 175 84.6
CsaV3_2G011130 Cucumis sativus L. HOM05D006777 ORTHO05D008360 2.2e-75 285.8 175 86.9
C04p41680 Brassica napus HOM05D006777 ORTHO05D008360 2.9e-75 285.4 176 86.4
TPR.G11902 Trifolium pratense HOM05D006777 ORTHO05D008360 2.9e-75 285.4 174 87.9
PGR083G1334 Punica granatum HOM05D006777 ORTHO05D008360 6.4e-75 284.3 175 86.3
BcaB02g08630 Brassica carinata HOM05D006777 ORTHO05D008360 8.4e-75 283.9 175 85.7
MELO3C019533.2 Cucumis melo HOM05D006777 ORTHO05D008360 8.4e-75 283.9 175 85.7
Zm00001eb210820 Zea mays HOM05D006777 ORTHO05D008360 8.4e-75 283.9 195 77.9
A04p08010 Brassica napus HOM05D006777 ORTHO05D008360 2.4e-74 282.3 176 85.2
AL7G42240 Arabidopsis lyrata HOM05D006777 ORTHO05D008360 3.2e-74 282.0 175 85.1
AT4G14147 Arabidopsis thaliana HOM05D006777 ORTHO05D008360 3.2e-74 282.0 175 85.1
Carub.0007s2827 Capsella rubella HOM05D006777 ORTHO05D008360 3.2e-74 282.0 175 85.1
DCAR_026626 Daucus carota HOM05D006777 ORTHO05D008360 4.2e-74 281.6 174 85.6
Sp7g12000 Schrenkiella parvula HOM05D006777 ORTHO05D008360 4.2e-74 281.6 175 85.1
Thhalv10026384m.g Eutrema salsugineum HOM05D006777 ORTHO05D008360 7.1e-74 280.8 175 85.1
HPP92_006972 Vanilla planifolia HOM05D006777 ORTHO05D008360 7.1e-74 280.8 175 84.6
Mapoly0060s0011 Marchantia polymorpha HOM05D006777 ORTHO05D008360 3.5e-73 278.5 175 83.4
Aqoxy5G00004 Aquilegia oxysepala HOM05D006777 ORTHO05D008360 6.0e-73 277.7 178 82.0
Hund11971 Selenicereus undatus HOM05D006777 ORTHO05D008360 1.3e-72 276.6 172 84.3
Nitab4.5_0000676g0120 Nicotiana tabacum HOM05D006777 ORTHO05D008360 3.0e-72 275.4 176 84.7
Lalb_Chr12g0205521 Lupinus albus HOM05D006777 ORTHO05D008360 1.9e-71 272.7 176 81.2
Eucgr.H02768 Eucalyptus grandis HOM05D006777 ORTHO05D008360 7.3e-71 270.8 162 87.7
Pp3c3_19880 Physcomitrium patens HOM05D006777 ORTHO05D008360 1.8e-69 266.2 173 80.3
SMO146G0157 Selaginella moellendorffii HOM05D006777 ORTHO05D008360 2.4e-69 265.8 173 80.3
Lsat_1_v5_gn_1_72060 Lactuca sativa HOM05D006777 ORTHO05D008360 6.9e-69 264.2 162 85.8
ClCG06G008050 Citrullus lanatus HOM05D006777 ORTHO05D008360 2.2e-67 259.2 167 82.6
AagrBONN_evm.TU.Sc2ySwM_228.5073 Anthoceros agrestis HOM05D006777 ORTHO05D008360 1.9e-66 256.1 169 80.5
MELO3C020359.2 Cucumis melo HOM05D006777 ORTHO05D008360 4.2e-66 255.0 157 86.6
Lalb_Chr07g0186741 Lupinus albus HOM05D006777 ORTHO05D008360 9.3e-66 253.8 158 84.8
Duzib212G0541 Durio zibethinus HOM05D006777 ORTHO05D008360 1.2e-65 253.4 153 88.9
unitig_37.g12031 Utricularia gibba HOM05D006777 ORTHO05D008360 1.6e-65 253.1 157 85.4
Actinidia35856 Actinidia chinensis HOM05D006777 ORTHO05D008360 2.3e-64 249.2 149 86.6
Sabra17G0050600 Salix brachista HOM05D006777 ORTHO05D008360 3.9e-64 248.4 153 86.9
CsaV3_3G018320 Cucumis sativus L. HOM05D006777 ORTHO05D008360 5.1e-64 248.1 153 86.9
BolC4t25746H Brassica oleracea HOM05D006777 ORTHO05D008360 2.5e-63 245.7 141 90.1
Hma1.2p1_0187F.1_g082390 Hydrangea macrophylla HOM05D006777 ORTHO05D008360 3.3e-63 245.4 140 90.7
Nn1g07943 Nelumbo nucifera HOM05D006777 ORTHO05D008360 9.6e-63 243.8 142 88.0
CBR_g4477 Chara braunii HOM05D006777 ORTHO05D008360 1.6e-62 243.0 178 69.1
BraA04t16489Z Brassica rapa HOM05D006777 ORTHO05D008360 2.1e-62 242.7 141 88.7
EL10Ac3g05505 Beta vulgaris HOM05D006777 ORTHO05D008360 4.9e-59 231.5 167 75.4
Dinv27219 Davidia involucrata HOM05D006777 ORTHO05D008360 4.9e-59 231.5 167 76.6
SGA_v2.0_scaffold14G07057 Striga asiatica HOM05D006777 ORTHO05D008360 6.5e-59 231.1 269 54.6
AUR62039283 Chenopodium quinoa HOM05D006777 ORTHO05D008360 1.4e-58 229.9 167 73.7
Peaxi162Scf00652g00116 Petunia axillaris HOM05D006777 ORTHO05D008360 4.2e-58 228.4 175 73.1
Nitab4.5_0000850g0170 Nicotiana tabacum HOM05D006777 ORTHO05D008360 1.3e-56 223.4 170 73.5
Haze_11625 Corylus avellana HOM05D006777 ORTHO05D008360 3.7e-54 215.3 229 59.4
COL.COLO4_20174 Corchorus olitorius HOM05D001598 ORTHO05D002757 8.2e-54 214.2 134 86.6
PGSC0003DMG402004570 Solanum tuberosum HOM05D006777 ORTHO05D008360 1.2e-52 210.3 136 84.6
Lj6A528G35 Lonicera japonica HOM05D006777 ORTHO05D008360 4.2e-50 201.8 131 84.7
SGA_v2.0_scaffold4G02170 Striga asiatica HOM05D006777 ORTHO05D008360 4.6e-49 198.4 240 54.2
CSS0009293 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 6.1e-49 198.0 129 84.5
CSS0028561 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 6.1e-49 198.0 129 84.5
SHI07424 Sapria himalayana HOM05D006777 ORTHO05D008360 7.9e-49 197.6 135 78.5
Hma1.2p1_0187F.1_g082380 Hydrangea macrophylla HOM05D006777 ORTHO05D008360 5.7e-47 191.4 102 96.1
CARHR220180 Cardamine hirsuta HOM05D006777 ORTHO05D008360 1.8e-45 186.4 101 93.1
Haze_27630 Corylus avellana HOM05D006777 ORTHO05D008360 5.9e-44 181.4 174 54.0
QL06p026356 Quercus lobata HOM05D000003 ORTHO05D008360 9.1e-37 157.5 121 73.6
Hund03125 Selenicereus undatus HOM05D006777 ORTHO05D008360 7.7e-36 154.5 164 55.5
Cre06.g260800 Chlamydomonas reinhardtii HOM05D006777 ORTHO05D008360 5.0e-35 151.8 181 47.5
vmacro00459 Vaccinium macrocarpon HOM05D006777 ORTHO05D008360 1.4e-34 150.2 110 73.6
Sed0006533 Sechium edule HOM05D006777 ORTHO05D008360 8.8e-32 141.0 75 93.3
ECA248G0011 Erigeron canadensis HOM05D006777 ORTHO05D008360 3.6e-25 119.0 81 80.2
CAN.G767.6 Capsicum annuum HOM05D006777 ORTHO05D008360 3.0e-24 115.9 81 79.0
Cpa.g.c27575.2 Carica papaya HOM05D006777 ORTHO05D008360 2.0e-23 113.2 60 93.3
Cc03_g11170 Coffea canephora HOM05D006777 ORTHO05D008360 7.7e-20 101.3 52 92.3
Cc00_g31310 Coffea canephora HOM05D006777 ORTHO05D008360 2.9e-19 99.4 73 72.6
Lj3P402T13 Lonicera japonica HOM05D006777 ORTHO05D008360 3.2e-18 95.9 74 67.6
CSS0011736 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 9.1e-13 77.8 37 91.9
CSS0009674 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 2.5e-10 69.7 38 84.2
Lj3A409T19 Lonicera japonica HOM05D006777 ORTHO05D008360 3.0e-08 62.8 59 57.6


User provided reference genes

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