Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G1680 Fragaria x ananassa HOM05D032679 ORTHO05D022627 8.9e-157 557.0 300 100.0
FAN18G3965 Fragaria x ananassa HOM05D032679 ORTHO05D022627 7.9e-97 357.8 188 98.9
FAN24G3340 Fragaria x ananassa HOM05D032679 ORTHO05D022627 6.7e-88 328.2 171 98.8
FAN23G0842 Fragaria x ananassa HOM05D004723 ORTHO05D006176 3.0e-11 73.6 78 48.7
FvH4_1g11200 Fragaria vesca HOM05D004723 ORTHO05D006176 8.7e-11 72.0 72 51.4
FAN19G1371 Fragaria x ananassa HOM05D004723 ORTHO05D006176 8.7e-11 72.0 72 51.4
FAN26G3228 Fragaria x ananassa HOM05D004723 ORTHO05D006176 8.7e-11 72.0 72 51.4
Prupe.7G173800 Prunus persica HOM05D004723 ORTHO05D006176 1.1e-10 71.6 72 48.6
MD02G1124600 Malus domestica HOM05D004723 ORTHO05D006176 2.5e-10 70.5 72 50.0
RcHm_v2.0_Chr2g0098611 Rosa chinensis HOM05D004723 ORTHO05D006176 5.6e-10 69.3 72 50.0
Lj4g0028127 Lotus japonicus HOM05D004723 ORTHO05D006176 7.4e-10 68.9 78 43.6
Sed0008382 Sechium edule HOM05D004723 ORTHO05D006176 7.4e-10 68.9 92 42.4
CiPaw.07G062200 Carya illinoinensis HOM05D004723 ORTHO05D006176 9.6e-10 68.6 79 44.3
Glyma.16G122800 Glycine max HOM05D004723 ORTHO05D006176 1.3e-09 68.2 78 43.6
Lalb_Chr16g0391491 Lupinus albus HOM05D004723 ORTHO05D006176 2.8e-09 67.0 77 44.2
Ca_18264_v3 Cicer arietinum L. HOM05D004723 ORTHO05D006176 4.8e-09 66.2 78 39.7
Atru.chr3.886 Acer truncatum HOM05D004723 ORTHO05D006176 6.2e-09 65.9 70 47.1
Atru.chr3.897 Acer truncatum HOM05D004723 ORTHO05D006176 6.2e-09 65.9 70 47.1
ClCG05G000690 Citrullus lanatus HOM05D004723 ORTHO05D006176 6.2e-09 65.9 79 41.8
MD15G1238700 Malus domestica HOM05D004723 ORTHO05D006176 6.2e-09 65.9 72 47.2
Phvul.003G266400 Phaseolus vulgaris HOM05D004723 ORTHO05D006176 8.1e-09 65.5 77 44.2
VMungo0251G3240 Vigna mungo HOM05D004723 ORTHO05D006176 1.1e-08 65.1 77 44.2
Cfa007019 Carpinus fangiana HOM05D004723 ORTHO05D006176 1.4e-08 64.7 72 45.8
Haze_03712 Corylus avellana HOM05D004723 ORTHO05D006176 1.4e-08 64.7 77 42.9
Psat7g090000 Pisum sativum HOM05D004723 ORTHO05D006176 1.4e-08 64.7 78 39.7
MELO3C006009.2 Cucumis melo HOM05D004723 ORTHO05D006176 1.8e-08 64.3 73 43.8
Thecc.08G139800 Theobroma cacao HOM05D004723 ORTHO05D006176 1.8e-08 64.3 72 45.8
Peaxi162Scf00198g00136 Petunia axillaris HOM05D004723 ORTHO05D006176 2.4e-08 63.9 77 40.3
Eucgr.I02314 Eucalyptus grandis HOM05D004723 ORTHO05D006176 4.0e-08 63.2 78 41.0
CANSAT25G3056 Cannabis sativa HOM05D004723 ORTHO05D006176 5.3e-08 62.8 77 42.9
Duzib147G1420 Durio zibethinus HOM05D004723 ORTHO05D006176 5.3e-08 62.8 73 45.2
Nitab4.5_0001789g0050 Nicotiana tabacum HOM05D004723 ORTHO05D006176 5.3e-08 62.8 77 40.3
Nitab4.5_0006899g0060 Nicotiana tabacum HOM05D004723 ORTHO05D006176 6.9e-08 62.4 77 40.3
Gohir.D04G039432 Gossypium hirsutum HOM05D004723 ORTHO05D006176 9.0e-08 62.0 78 42.3
Gorai.012G044400 Gossypium raimondii HOM05D004723 ORTHO05D006176 9.0e-08 62.0 78 42.3
HanXRQChr09g0257321 Helianthus annuus HOM05D004723 ORTHO05D006176 9.0e-08 62.0 78 39.7
Medtr4g096820 Medicago truncatula HOM05D004723 ORTHO05D006176 9.0e-08 62.0 93 36.6
CsaV3_3G007910 Cucumis sativus L. HOM05D004723 ORTHO05D006176 1.2e-07 61.6 73 42.5
Dinv40130 Davidia involucrata HOM05D004723 ORTHO05D006176 1.2e-07 61.6 78 43.6
TWI09G0244 Tripterygium wilfordii HOM05D004723 ORTHO05D006176 1.2e-07 61.6 78 39.7
arahy.Tifrunner.gnm1.ann1.7VD04T Arachis hypogaea HOM05D004723 ORTHO05D006176 1.5e-07 61.2 76 40.8
GSVIVG01007226001 Vitis vinifera HOM05D004723 ORTHO05D006176 2.0e-07 60.8 78 38.5
Gohir.A05G376600 Gossypium hirsutum HOM05D004723 ORTHO05D006176 2.6e-07 60.5 78 41.0
arahy.Tifrunner.gnm1.ann1.DG5MW5 Arachis hypogaea HOM05D004723 ORTHO05D006176 3.4e-07 60.1 70 41.4
CAN.G890.41 Capsicum annuum HOM05D004723 ORTHO05D006176 3.4e-07 60.1 77 37.7
Glyma.02G045200 Glycine max HOM05D004723 ORTHO05D006176 3.4e-07 60.1 69 42.0
Ciclev10025027m.g Citrus clementina HOM05D004723 ORTHO05D006176 4.5e-07 59.7 77 41.6
Lsat_1_v5_gn_4_144101 Lactuca sativa HOM05D004723 ORTHO05D006176 4.5e-07 59.7 78 42.3
Manes.10G142700 Manihot esculenta HOM05D004723 ORTHO05D006176 4.5e-07 59.7 89 38.2
Lj4A224T28 Lonicera japonica HOM05D004723 ORTHO05D006176 5.8e-07 59.3 70 42.9
FAN03G2005 Fragaria x ananassa HOM05D004723 ORTHO05D002269 7.6e-07 58.9 74 47.3
PGR119G2074 Punica granatum HOM05D004723 ORTHO05D006176 7.6e-07 58.9 72 41.7
TAR628G1348 Trochodendron aralioides HOM05D004723 ORTHO05D006176 9.9e-07 58.5 78 39.7
vmacro18436 Vaccinium macrocarpon HOM05D004723 ORTHO05D006176 9.9e-07 58.5 76 39.5
CSS0012813 Camellia sinensis var. sinensis HOM05D004723 ORTHO05D006176 1.7e-06 57.8 72 41.7
CSS0036730 Camellia sinensis var. sinensis HOM05D004723 ORTHO05D006176 1.7e-06 57.8 72 41.7
Cpa.g.sc6.304 Carica papaya HOM05D004723 ORTHO05D006176 1.7e-06 57.8 72 40.3
Gohir.1Z049326 Gossypium hirsutum HOM05D004723 ORTHO05D006176 1.7e-06 57.8 61 47.5
PGSC0003DMG400003588 Solanum tuberosum HOM05D004723 ORTHO05D006176 1.7e-06 57.8 77 36.4
DCAR_024713 Daucus carota HOM05D004723 ORTHO05D006176 2.9e-06 57.0 70 41.4
Solyc02g083470.3 Solanum lycopersicum HOM05D004723 ORTHO05D006176 2.9e-06 57.0 76 36.8
Sopen02g028260 Solanum pennellii HOM05D004723 ORTHO05D006176 2.9e-06 57.0 76 36.8
ECA232G2222 Erigeron canadensis HOM05D004723 ORTHO05D006176 3.8e-06 56.6 78 37.2
Sc07g0001170 Simmondsia chinensis HOM05D004723 ORTHO05D006176 3.8e-06 56.6 75 41.3
Cc07_g11220 Coffea canephora HOM05D004723 ORTHO05D006176 4.9e-06 56.2 79 39.2
TPR.G4863 Trifolium pratense HOM05D004723 ORTHO05D006176 6.4e-06 55.8 77 37.7
FAN22G1655 Fragaria x ananassa HOM05D002244 ORTHO05D035452 8.4e-06 55.5 60 48.3


User provided reference genes

Program Settings