Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G1673 Fragaria x ananassa HOM05D007721 ORTHO05D009811 3.7e-38 161.0 78 100.0
FAN12G3598 Fragaria x ananassa HOM05D007721 ORTHO05D009811 1.5e-31 139.0 78 89.7
FAN22G0179 Fragaria x ananassa HOM05D007721 ORTHO05D009811 3.1e-29 131.3 96 74.0
FAN07G1724 Fragaria x ananassa HOM05D007721 ORTHO05D009811 4.1e-29 131.0 67 94.0
RcHm_v2.0_Chr4g0411561 Rosa chinensis HOM05D007721 ORTHO05D009811 7.0e-29 130.2 67 91.0
MD04G1023900 Malus domestica HOM05D007721 ORTHO05D009811 5.9e-28 127.1 67 86.6
Prupe.1G174200 Prunus persica HOM05D007721 ORTHO05D009811 5.9e-28 127.1 67 89.6
Manes.06G162100 Manihot esculenta HOM05D007721 ORTHO05D009811 3.2e-26 121.3 67 83.6
Potri.009G050900 Populus trichocarpa HOM05D007721 ORTHO05D009811 3.6e-25 117.9 64 85.9
GSVIVG01031536001 Vitis vinifera HOM05D007721 ORTHO05D009811 6.1e-25 117.1 64 81.2
CiPaw.14G116700 Carya illinoinensis HOM05D007721 ORTHO05D009811 8.0e-25 116.7 67 80.6
Ciclev10017339m.g Citrus clementina HOM05D007721 ORTHO05D009811 1.8e-24 115.5 64 78.1
Eucgr.J00742 Eucalyptus grandis HOM05D007721 ORTHO05D009811 3.0e-24 114.8 67 74.6
Hma1.2p1_0591F.1_g185200 Hydrangea macrophylla HOM05D007721 ORTHO05D009811 4.0e-24 114.4 65 76.9
Hma1.2p1_0055F.1_g031440 Hydrangea macrophylla HOM05D007721 ORTHO05D009811 5.2e-24 114.0 65 76.9
QL01p004762 Quercus lobata HOM05D007721 ORTHO05D009811 5.2e-24 114.0 63 81.0
CSS0018729 Camellia sinensis var. sinensis HOM05D007721 ORTHO05D009811 6.8e-24 113.6 64 78.1
Oeu013174.2 Olea europaea HOM05D007721 ORTHO05D009811 6.8e-24 113.6 64 79.7
Nitab4.5_0000677g0250 Nicotiana tabacum HOM05D007721 ORTHO05D009811 8.8e-24 113.2 63 77.8
QL01p004062 Quercus lobata HOM05D007721 ORTHO05D009811 1.2e-23 112.8 63 79.4
Solyc10g079920.2 Solanum lycopersicum HOM05D007721 ORTHO05D009811 1.5e-23 112.5 64 76.6
Sopen10g030540 Solanum pennellii HOM05D007721 ORTHO05D009811 1.5e-23 112.5 64 76.6
Actinidia06926 Actinidia chinensis HOM05D007721 ORTHO05D009811 3.4e-23 111.3 64 75.0
Potri.012G127000 Populus trichocarpa HOM05D007721 ORTHO05D009811 3.4e-23 111.3 64 79.7
Peaxi162Scf00069g00105 Petunia axillaris HOM05D007721 ORTHO05D009811 5.7e-23 110.5 64 75.0
ECA236G4835 Erigeron canadensis HOM05D007721 ORTHO05D009811 7.5e-23 110.2 64 81.2
Nn7g36378 Nelumbo nucifera HOM05D007721 ORTHO05D009811 9.8e-23 109.8 64 78.1
Thecc.09G239100 Theobroma cacao HOM05D007721 ORTHO05D009811 9.8e-23 109.8 67 74.6
Migut.D01985 Erythranthe guttata HOM05D007721 ORTHO05D009811 1.3e-22 109.4 64 79.7
Phvul.010G051900 Phaseolus vulgaris HOM05D007721 ORTHO05D009811 1.7e-22 109.0 64 73.4
CARHR200650 Cardamine hirsuta HOM05D007721 ORTHO05D009811 2.8e-22 108.2 64 76.6
Ah.06g193880 Amaranthus hybridus HOM05D007721 ORTHO05D009811 3.7e-22 107.8 65 73.8
Lsat_1_v5_gn_8_56740 Lactuca sativa HOM05D007721 ORTHO05D009811 3.7e-22 107.8 64 81.2
Sed0010702 Sechium edule HOM05D007721 ORTHO05D009811 6.3e-22 107.1 64 76.6
Sp6g31180 Schrenkiella parvula HOM05D007721 ORTHO05D009811 8.3e-22 106.7 64 73.4
A10p25380 Brassica napus HOM05D007721 ORTHO05D009811 1.1e-21 106.3 64 75.0
Lj3g0008015 Lotus japonicus HOM05D007721 ORTHO05D009811 1.1e-21 106.3 67 70.1
Nitab4.5_0000937g0060 Nicotiana tabacum HOM05D007721 ORTHO05D009811 1.1e-21 106.3 64 71.9
Os01g0939000 Oryza sativa ssp. japonica HOM05D007721 ORTHO05D009811 1.8e-21 105.5 78 60.3
Gohir.A05G070100 Gossypium hirsutum HOM05D007721 ORTHO05D009811 2.4e-21 105.1 67 67.2
SEGI_08983 Sequoiadendron giganteum HOM05D007721 ORTHO05D009811 3.1e-21 104.8 65 73.8
SEGI_33053 Sequoiadendron giganteum HOM05D007721 ORTHO05D009811 3.1e-21 104.8 65 73.8
Carub.0006s1099 Capsella rubella HOM05D007721 ORTHO05D009811 4.1e-21 104.4 64 70.3
Glyma.03G114000 Glycine max HOM05D007721 ORTHO05D009811 7.0e-21 103.6 64 71.9
TPR.G33115 Trifolium pratense HOM05D004530 ORTHO05D009811 9.1e-21 103.2 64 70.3
Gorai.001G137300 Gossypium raimondii HOM05D007721 ORTHO05D009811 1.2e-20 102.8 67 67.2
SalBow6G6016 Salvia bowleyana HOM05D007721 ORTHO05D009811 2.0e-20 102.1 64 71.9
Lalb_Chr07g0195541 Lupinus albus HOM05D007721 ORTHO05D009811 2.7e-20 101.7 64 73.4
SalBow6G6561 Salvia bowleyana HOM05D007721 ORTHO05D009811 2.7e-20 101.7 64 71.9
Dinv09950 Davidia involucrata HOM05D007721 ORTHO05D009811 7.7e-20 100.1 64 68.8
MELO3C014581.2 Cucumis melo HOM05D007721 ORTHO05D009811 1.3e-19 99.4 57 78.9
Medtr7g102340 Medicago truncatula HOM05D007721 ORTHO05D009811 1.7e-19 99.0 67 65.7
Nitab4.5_0000562g0070 Nicotiana tabacum HOM05D007721 ORTHO05D009811 1.7e-19 99.0 59 72.9
Cc01_g05050 Coffea canephora HOM05D007721 ORTHO05D009811 3.8e-19 97.8 64 70.3
Gohir.A07G123300 Gossypium hirsutum HOM05D007721 ORTHO05D009811 3.8e-19 97.8 67 67.2
arahy.Tifrunner.gnm1.ann1.MV9AMF Arachis hypogaea HOM05D007721 ORTHO05D009811 8.6e-19 96.7 67 62.7
arahy.Tifrunner.gnm1.ann1.S4R3T1 Arachis hypogaea HOM05D007721 ORTHO05D009811 8.6e-19 96.7 67 62.7
unitig_746.g26884 Utricularia gibba HOM05D007721 ORTHO05D009811 1.1e-18 96.3 65 67.7
AL6G23280 Arabidopsis lyrata HOM05D007721 ORTHO05D009811 1.5e-18 95.9 56 78.6
AL6G23350 Arabidopsis lyrata HOM05D007721 ORTHO05D009811 1.5e-18 95.9 56 78.6
BcaC03g15544 Brassica carinata HOM05D007721 ORTHO05D009811 4.2e-18 94.4 65 66.2
C02p32350 Brassica napus HOM05D007721 ORTHO05D009811 4.2e-18 94.4 65 66.2
C03p16480 Brassica napus HOM05D007721 ORTHO05D009811 5.5e-18 94.0 65 64.6
Zm00001eb141680 Zea mays HOM05D007721 ORTHO05D009811 9.5e-18 93.2 67 64.2
BcaB05g24889 Brassica carinata HOM05D007721 ORTHO05D009811 1.2e-17 92.8 66 63.6
BolC3t14068H Brassica oleracea HOM05D001160 ORTHO05D001092 1.2e-17 92.8 65 64.6
AagrBONN_evm.TU.Sc2ySwM_362.695 Anthoceros agrestis HOM05D007721 ORTHO05D009811 2.1e-17 92.0 67 62.7
A02p19730 Brassica napus HOM05D007721 ORTHO05D009811 3.6e-17 91.3 65 64.6
BcaC01g06369 Brassica carinata HOM05D007721 ORTHO05D009811 4.7e-17 90.9 65 63.1
A03p14040 Brassica napus HOM05D007721 ORTHO05D009811 6.1e-17 90.5 65 63.1
BraA03t10703Z Brassica rapa HOM05D007721 ORTHO05D009811 6.1e-17 90.5 65 63.1
BraA02t07009Z Brassica rapa HOM05D007721 ORTHO05D009811 1.8e-16 89.0 65 63.1
vmacro04125 Vaccinium macrocarpon HOM05D007721 ORTHO05D009811 9.8e-15 83.2 49 75.5
Thhalv10015165m.g Eutrema salsugineum HOM05D007721 ORTHO05D009811 1.7e-14 82.4 65 63.1
Sc08g0006390 Simmondsia chinensis HOM05D007721 ORTHO05D009811 1.7e-14 82.4 71 57.7
TAR623G1786 Trochodendron aralioides HOM05D007721 ORTHO05D009811 2.9e-14 81.6 49 77.6
Mapoly0048s0062 Marchantia polymorpha HOM05D007721 ORTHO05D009811 5.4e-13 77.4 56 55.4
Carub.0008s1583 Capsella rubella HOM05D007721 ORTHO05D009811 1.7e-11 72.4 64 56.2
HanXRQChr04g0118971 Helianthus annuus HOM05D007721 ORTHO05D009811 8.9e-08 60.1 38 71.1
arahy.Tifrunner.gnm1.ann1.K7RUU1 Arachis hypogaea HOM05D007721 ORTHO05D009811 5.8e-07 57.4 29 82.8
PGSC0003DMG400029826 Solanum tuberosum HOM05D007721 ORTHO05D009811 3.7e-06 54.7 52 51.9
Medtr3g018660 Medicago truncatula HOM05D007721 ORTHO05D009811 6.4e-06 53.9 27 88.9
SHI29807 Sapria himalayana HOM05D012376 ORTHO05D000014 8.3e-06 53.5 30 80.0
SGA_v2.0_scaffold7G04151 Striga asiatica HOM05D000252 ORTHO05D000307 8.3e-06 53.5 38 71.1


User provided reference genes

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