Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G1645 Fragaria x ananassa HOM05D000037 ORTHO05D208740 7.1e-62 240.4 116 100.0
FAN07G2109 Fragaria x ananassa HOM05D000037 ORTHO05D000608 7.9e-37 157.1 108 72.2
FvH4_4g07190 Fragaria vesca HOM05D000037 ORTHO05D000608 3.0e-36 155.2 108 71.3
RcHm_v2.0_Chr4g0399471 Rosa chinensis HOM05D000037 ORTHO05D000608 3.1e-25 118.6 109 53.2
RcHm_v2.0_Chr4g0399381 Rosa chinensis HOM05D000037 ORTHO05D000608 2.2e-23 112.5 112 50.0
RcHm_v2.0_Chr4g0399391 Rosa chinensis HOM05D000037 ORTHO05D000608 2.2e-23 112.5 112 50.0
RcHm_v2.0_Chr4g0399401 Rosa chinensis HOM05D000037 ORTHO05D000608 2.2e-23 112.5 112 50.0
RcHm_v2.0_Chr4g0399411 Rosa chinensis HOM05D000037 ORTHO05D000608 3.8e-23 111.7 108 51.9
FAN17G0985 Fragaria x ananassa HOM05D000037 ORTHO05D000608 1.6e-21 106.3 107 51.4
FvH4_4g07180 Fragaria vesca HOM05D000037 ORTHO05D000608 3.0e-20 102.1 107 48.6
MD15G1124300 Malus domestica HOM05D000037 ORTHO05D000608 4.2e-14 81.6 105 40.0
Potri.006G252900 Populus trichocarpa HOM05D000037 ORTHO05D000608 2.0e-11 72.8 110 38.2
FAN15G2520 Fragaria x ananassa HOM05D000037 ORTHO05D000608 4.4e-11 71.6 110 35.5
FvH4_2g29242 Fragaria vesca HOM05D000037 ORTHO05D000608 7.5e-11 70.9 110 35.5
FAN24G0161 Fragaria x ananassa HOM05D000037 ORTHO05D000608 9.8e-11 70.5 110 35.5
FAN27G0019 Fragaria x ananassa HOM05D000037 ORTHO05D000608 9.8e-11 70.5 110 35.5
Lj6g0002551 Lotus japonicus HOM05D000037 ORTHO05D000608 9.8e-11 70.5 110 35.5
BraA08t33777Z Brassica rapa HOM05D000037 ORTHO05D000608 6.3e-10 67.8 112 33.0
Glyma.12G003700 Glycine max HOM05D000037 ORTHO05D000608 1.1e-09 67.0 113 34.5
Glyma.14G044200 Glycine max HOM05D000037 ORTHO05D000608 1.1e-09 67.0 113 34.5
Dinv15955 Davidia involucrata HOM05D000037 ORTHO05D000608 1.8e-09 66.2 110 37.3
FAN26G2240 Fragaria x ananassa HOM05D000037 ORTHO05D000608 5.4e-09 64.7 111 36.0
Prupe.1G479600 Prunus persica HOM05D000037 ORTHO05D000608 5.4e-09 64.7 113 35.4
FAN23G2669 Fragaria x ananassa HOM05D000037 ORTHO05D035235 7.0e-09 64.3 130 33.1
Lalb_Chr04g0260951 Lupinus albus HOM05D000037 ORTHO05D000608 7.0e-09 64.3 111 33.3
MD15G1124200 Malus domestica HOM05D000037 ORTHO05D000608 7.0e-09 64.3 112 33.0
Prupe.1G479700 Prunus persica HOM05D000037 ORTHO05D000608 7.0e-09 64.3 113 33.6
RcHm_v2.0_Chr4g0399361 Rosa chinensis HOM05D000037 ORTHO05D346277 7.0e-09 64.3 43 65.1
Thecc.08G058700 Theobroma cacao HOM05D000037 ORTHO05D000608 7.0e-09 64.3 112 34.8
Lj8A718G44 Lonicera japonica HOM05D000037 ORTHO05D000608 1.6e-08 63.2 110 34.5
Lj8C717T4 Lonicera japonica HOM05D000037 ORTHO05D000608 1.6e-08 63.2 110 34.5
MBI01_g47380_MAGBIO Magnolia biondii HOM05D000037 ORTHO05D000608 1.6e-08 63.2 113 33.6
Nn2g12025 Nelumbo nucifera HOM05D000037 ORTHO05D000608 2.0e-08 62.8 111 33.3
RcHm_v2.0_Chr1g0329741 Rosa chinensis HOM05D000037 ORTHO05D000608 2.0e-08 62.8 111 35.1
vmacro11158 Vaccinium macrocarpon HOM05D000037 ORTHO05D000608 2.0e-08 62.8 110 33.6
AT5G27530 Arabidopsis thaliana HOM05D000037 ORTHO05D000608 2.7e-08 62.4 110 34.5
Medtr0157s0060 Medicago truncatula HOM05D000037 ORTHO05D000608 2.7e-08 62.4 110 31.8
Medtr4g034020 Medicago truncatula HOM05D000037 ORTHO05D000608 2.7e-08 62.4 110 31.8
Dinv09854 Davidia involucrata HOM05D000037 ORTHO05D000608 3.5e-08 62.0 108 34.3
Migut.I00126 Erythranthe guttata HOM05D000037 ORTHO05D000608 3.5e-08 62.0 113 33.6
Eucgr.C02787 Eucalyptus grandis HOM05D000037 ORTHO05D000608 3.5e-08 62.0 112 33.9
Eucgr.C02788 Eucalyptus grandis HOM05D000037 ORTHO05D000608 3.5e-08 62.0 112 33.9
Lsat_1_v5_gn_5_131300 Lactuca sativa HOM05D000037 ORTHO05D000608 3.5e-08 62.0 111 34.2
Sabra18G0030900 Salix brachista HOM05D000037 ORTHO05D002477 3.5e-08 62.0 112 33.0
Thecc.09G026600 Theobroma cacao HOM05D000037 ORTHO05D000608 3.5e-08 62.0 110 36.4
HanXRQChr10g0303011 Helianthus annuus HOM05D000037 ORTHO05D000608 4.5e-08 61.6 111 34.2
Lj8A717T39 Lonicera japonica HOM05D000037 ORTHO05D000608 4.5e-08 61.6 110 33.6
Lalb_Chr18g0045411 Lupinus albus HOM05D000037 ORTHO05D000608 4.5e-08 61.6 110 30.9
Lalb_Chr04g0260921 Lupinus albus HOM05D000037 ORTHO05D000608 5.9e-08 61.2 111 32.4
Lalb_Chr04g0260961 Lupinus albus HOM05D000037 ORTHO05D000608 5.9e-08 61.2 111 32.4
AL6G39480 Arabidopsis lyrata HOM05D000037 ORTHO05D000608 7.7e-08 60.8 110 34.5
HanXRQChr13g0402851 Helianthus annuus HOM05D000037 ORTHO05D000608 7.7e-08 60.8 111 33.3
CARHR244030 Cardamine hirsuta HOM05D000037 ORTHO05D000608 1.3e-07 60.1 114 32.5
arahy.Tifrunner.gnm1.ann1.QCT9PL Arachis hypogaea HOM05D000037 ORTHO05D000608 2.3e-07 59.3 113 31.0
Ca_12007_v3 Cicer arietinum L. HOM05D000037 ORTHO05D000608 2.3e-07 59.3 119 34.5
Dinv09851 Davidia involucrata HOM05D000037 ORTHO05D000608 2.3e-07 59.3 106 34.0
SMO361G0027 Selaginella moellendorffii HOM05D000037 ORTHO05D001500 2.3e-07 59.3 108 32.4
Lalb_Chr04g0260941 Lupinus albus HOM05D000037 ORTHO05D000608 2.9e-07 58.9 112 29.5
Lalb_Chr14g0373781 Lupinus albus HOM05D000037 ORTHO05D000608 2.9e-07 58.9 110 35.5
Manes.11G054800 Manihot esculenta HOM05D000037 ORTHO05D000608 2.9e-07 58.9 109 33.0
HanXRQChr13g0402861 Helianthus annuus HOM05D000037 ORTHO05D000608 3.8e-07 58.5 110 33.6
Lj8A694T49 Lonicera japonica HOM05D000037 ORTHO05D000608 3.8e-07 58.5 111 33.3
Lj8A716G19 Lonicera japonica HOM05D000037 ORTHO05D000608 3.8e-07 58.5 111 33.3
Prupe.7G064200 Prunus persica HOM05D000037 ORTHO05D000608 3.8e-07 58.5 114 33.3
BcaB06g29208 Brassica carinata HOM05D000037 ORTHO05D000648 5.0e-07 58.2 117 36.8
BcaNung02845 Brassica carinata HOM05D000037 ORTHO05D000648 5.0e-07 58.2 117 36.8
Cpa.g.sc28.110 Carica papaya HOM05D000037 ORTHO05D000608 5.0e-07 58.2 111 28.8
vmacro18980 Vaccinium macrocarpon HOM05D000037 ORTHO05D000608 5.0e-07 58.2 110 31.8
vmacro23009 Vaccinium macrocarpon HOM05D000037 ORTHO05D000608 5.0e-07 58.2 110 31.8
ATR0322G039 Amborella trichopoda HOM05D000037 ORTHO05D000608 6.6e-07 57.8 109 30.3
CiPaw.05G236800 Carya illinoinensis HOM05D000037 ORTHO05D000608 6.6e-07 57.8 112 32.1
Ciclev10027074m.g Citrus clementina HOM05D000037 ORTHO05D000608 6.6e-07 57.8 110 34.5
COL.COLO4_12934 Corchorus olitorius HOM05D000037 ORTHO05D000608 6.6e-07 57.8 110 34.5
Manes.11G054600 Manihot esculenta HOM05D000037 ORTHO05D000608 6.6e-07 57.8 110 30.9
Sabra15G0111500 Salix brachista HOM05D000037 ORTHO05D000608 6.6e-07 57.8 119 33.6
Atru.chr11.2055 Acer truncatum HOM05D000037 ORTHO05D000648 8.6e-07 57.4 108 31.5
Cpa.g.sc10.250 Carica papaya HOM05D000037 ORTHO05D000608 8.6e-07 57.4 118 33.1
Thhalv10023928m.g Eutrema salsugineum HOM05D000037 ORTHO05D000608 8.6e-07 57.4 109 33.9
Psat5g301840 Pisum sativum HOM05D000037 ORTHO05D000608 8.6e-07 57.4 111 32.4
Solyc03g116580.4 Solanum lycopersicum HOM05D000037 ORTHO05D000608 8.6e-07 57.4 110 31.8
Sopen03g035490 Solanum pennellii HOM05D000037 ORTHO05D000608 8.6e-07 57.4 110 31.8
HanXRQChr10g0303131 Helianthus annuus HOM05D000037 ORTHO05D000608 1.1e-06 57.0 115 33.9
Hund03031 Selenicereus undatus HOM05D000037 ORTHO05D000608 1.1e-06 57.0 110 29.1
CsaV3_4G001500 Cucumis sativus L. HOM05D000037 ORTHO05D000608 1.5e-06 56.6 113 31.9
Dinv38108 Davidia involucrata HOM05D000037 ORTHO05D000608 1.5e-06 56.6 106 32.1
Thhalv10023886m.g Eutrema salsugineum HOM05D000037 ORTHO05D000608 1.5e-06 56.6 109 33.9
TWI63G1171 Tripterygium wilfordii HOM05D000037 ORTHO05D000608 1.5e-06 56.6 110 34.5
Aa31LG8G2940 Aethionema arabicum HOM05D000037 ORTHO05D000608 1.9e-06 56.2 114 27.2
AT5G17200 Arabidopsis thaliana HOM05D000037 ORTHO05D000608 1.9e-06 56.2 113 32.7
Duzib235G0036 Durio zibethinus HOM05D000037 ORTHO05D000608 1.9e-06 56.2 112 31.2
PSO339G2079 Papaver somniferum HOM05D000037 ORTHO05D000608 1.9e-06 56.2 112 33.0
QL03p029798 Quercus lobata HOM05D000037 ORTHO05D000608 1.9e-06 56.2 116 31.0
TAR383G0648 Trochodendron aralioides HOM05D000037 ORTHO05D000608 1.9e-06 56.2 110 35.5
Eucgr.F02531 Eucalyptus grandis HOM05D000037 ORTHO05D000608 2.5e-06 55.8 110 31.8
FvH4_7g04480 Fragaria vesca HOM05D000037 ORTHO05D000608 2.5e-06 55.8 111 32.4
FAN06G4450 Fragaria x ananassa HOM05D000037 ORTHO05D000608 2.5e-06 55.8 111 32.4
FAN06G4513 Fragaria x ananassa HOM05D000037 ORTHO05D000608 2.5e-06 55.8 111 32.4
Medtr6g028080 Medicago truncatula HOM05D000037 ORTHO05D000608 3.3e-06 55.5 114 28.9
Nn4g22738 Nelumbo nucifera HOM05D000037 ORTHO05D000648 3.3e-06 55.5 108 30.6
PSO339G6175 Papaver somniferum HOM05D000037 ORTHO05D000608 3.3e-06 55.5 111 30.6
Atru.chr1.3016 Acer truncatum HOM05D000037 ORTHO05D000608 4.2e-06 55.1 110 30.9
AL6G28250 Arabidopsis lyrata HOM05D000037 ORTHO05D000608 4.2e-06 55.1 110 31.8
AT4G32380 Arabidopsis thaliana HOM05D000037 ORTHO05D000608 4.2e-06 55.1 110 32.7
Cpa.g.sc10.242 Carica papaya HOM05D000037 ORTHO05D000608 4.2e-06 55.1 111 30.6
Gohir.D10G076400 Gossypium hirsutum HOM05D000037 ORTHO05D000608 4.2e-06 55.1 110 35.5
Gorai.011G082200 Gossypium raimondii HOM05D000037 ORTHO05D000608 4.2e-06 55.1 110 35.5
Lj8A695G64 Lonicera japonica HOM05D000037 ORTHO05D000608 4.2e-06 55.1 111 31.5
Sp6g27030 Schrenkiella parvula HOM05D000037 ORTHO05D000608 4.2e-06 55.1 112 31.2
TWI63G0420 Tripterygium wilfordii HOM05D000037 ORTHO05D000608 4.2e-06 55.1 110 32.7
GSVIVG01017307001 Vitis vinifera HOM05D000037 ORTHO05D000608 4.2e-06 55.1 109 31.2
Gohir.A10G075100 Gossypium hirsutum HOM05D000037 ORTHO05D000608 5.5e-06 54.7 110 35.5
Psat1g095040 Pisum sativum HOM05D000037 ORTHO05D000608 5.5e-06 54.7 113 26.5
C09p60000 Brassica napus HOM05D000037 ORTHO05D000608 7.2e-06 54.3 110 30.9
HanXRQChr13g0402881 Helianthus annuus HOM05D000037 ORTHO05D000608 7.2e-06 54.3 110 30.9
PGR102G0441 Punica granatum HOM05D000037 ORTHO05D000608 7.2e-06 54.3 110 31.8
THA.LOC104825659 Tarenaya hassleriana HOM05D000037 ORTHO05D001500 7.2e-06 54.3 116 31.0
BcaNung00422 Brassica carinata HOM05D000037 ORTHO05D000608 9.5e-06 53.9 112 32.1
A05p02590 Brassica napus HOM05D000037 ORTHO05D000648 9.5e-06 53.9 122 35.2
AUR62000322 Chenopodium quinoa HOM05D000037 ORTHO05D000419 9.5e-06 53.9 113 29.2
Ciclev10026919m.g Citrus clementina HOM05D000037 ORTHO05D000608 9.5e-06 53.9 100 36.0
MELO3C032861.2 Cucumis melo HOM05D000037 ORTHO05D000608 9.5e-06 53.9 113 30.1
Migut.N03373 Erythranthe guttata HOM05D000037 ORTHO05D000648 9.5e-06 53.9 108 31.5
Lj8A716T20 Lonicera japonica HOM05D000037 ORTHO05D000608 9.5e-06 53.9 111 30.6
Lj6g0024129 Lotus japonicus HOM05D000037 ORTHO05D000608 9.5e-06 53.9 113 29.2
PSO210G5167 Papaver somniferum HOM05D000037 ORTHO05D000608 9.5e-06 53.9 110 29.1
TPR.G37277 Trifolium pratense HOM05D000037 ORTHO05D000648 9.5e-06 53.9 110 31.8


User provided reference genes

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