Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G1628 Fragaria x ananassa HOM05D003861 ORTHO05D003172 4.7e-102 374.4 172 100.0
FAN04G0957 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.2e-81 306.6 167 86.8
FAN05G0636 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.2e-81 306.6 167 86.8
FAN06G2077 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.2e-81 306.6 167 86.8
FAN08G0306 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.2e-81 306.6 167 86.8
FAN11G3391 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.2e-81 306.6 167 86.8
FAN19G1774 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.2e-81 306.6 167 86.8
FAN25G3807 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.2e-81 306.6 167 86.8
FAN21G1384 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.3e-80 303.1 167 85.6
FAN12G0494 Fragaria x ananassa HOM05D003861 ORTHO05D003172 6.6e-80 300.8 167 85.6
FAN05G2260 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.9e-79 299.3 167 85.6
FAN08G0030 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.9e-79 299.3 167 85.6
FAN18G3238 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.9e-79 299.3 167 85.6
FAN20G1736 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.9e-79 299.3 167 85.6
FAN05G5297 Fragaria x ananassa HOM05D003861 ORTHO05D003172 4.3e-79 298.1 167 85.0
FAN20G2009 Fragaria x ananassa HOM05D003861 ORTHO05D003172 5.6e-79 297.7 167 85.0
FAN24G3411 Fragaria x ananassa HOM05D003861 ORTHO05D003172 5.6e-79 297.7 167 85.0
FAN20G3207 Fragaria x ananassa HOM05D003861 ORTHO05D003172 7.3e-79 297.4 167 85.0
FAN06G2497 Fragaria x ananassa HOM05D003861 ORTHO05D003172 9.5e-79 297.0 167 85.0
FAN28G1231 Fragaria x ananassa HOM05D003861 ORTHO05D003172 9.5e-79 297.0 167 85.0
FAN26G2524 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.8e-78 295.4 167 85.0
FAN18G0257 Fragaria x ananassa HOM05D003861 ORTHO05D003172 8.1e-78 293.9 167 84.4
FAN02G2656 Fragaria x ananassa HOM05D003861 ORTHO05D003172 5.1e-72 274.6 153 85.0
FAN25G1915 Fragaria x ananassa HOM05D003861 ORTHO05D003172 5.2e-69 264.6 163 79.8
FAN21G1959 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.8e-62 242.3 132 86.4
FAN01G2986 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.6e-57 226.5 167 70.1
FAN21G0339 Fragaria x ananassa HOM05D003861 ORTHO05D003172 9.0e-53 210.7 166 65.1
FAN16G0131 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.1e-47 193.7 171 57.9
FvH4_4g07540 Fragaria vesca HOM05D003861 ORTHO05D003172 1.3e-46 190.3 96 92.7
FvH4_4g11860 Fragaria vesca HOM05D003861 ORTHO05D003172 1.3e-46 190.3 96 92.7
FAN12G1335 Fragaria x ananassa HOM05D003861 ORTHO05D003172 8.1e-46 187.6 96 91.7
FAN16G1856 Fragaria x ananassa HOM05D003861 ORTHO05D003172 5.3e-45 184.9 167 58.1
FAN03G3146 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.2e-44 183.7 113 77.9
FAN22G1234 Fragaria x ananassa HOM05D003861 ORTHO05D003172 7.6e-44 181.0 159 59.7
FAN17G0616 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.3e-43 180.3 96 88.5
FAN04G2066 Fragaria x ananassa HOM05D003861 ORTHO05D003172 6.4e-43 177.9 96 84.4
FAN06G1795 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.9e-42 176.4 107 80.4
FAN19G1462 Fragaria x ananassa HOM05D003861 ORTHO05D003172 5.5e-42 174.9 169 53.3
FAN22G1000 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.2e-41 173.7 98 84.7
FAN09G4198 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.7e-41 172.6 159 58.5
FAN06G2716 Fragaria x ananassa HOM05D003861 ORTHO05D003172 7.4e-39 164.5 173 50.3
FAN10G4357 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.8e-38 162.5 98 78.6
FAN23G2209 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.1e-37 160.6 96 82.3
FvH4_7g07670 Fragaria vesca HOM05D003861 ORTHO05D003172 1.4e-37 160.2 167 50.9
FAN10G2310 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.5e-36 156.8 159 55.3
FvH4_4g24130 Fragaria vesca HOM05D003861 ORTHO05D003172 4.5e-36 155.2 167 50.3
FAN17G0620 Fragaria x ananassa HOM05D003861 ORTHO05D003172 3.5e-33 145.6 74 90.5
FAN19G0585 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.0e-32 144.1 75 90.7
FAN20G0681 Fragaria x ananassa HOM05D003861 ORTHO05D003172 5.1e-32 141.7 170 43.5
FAN05G4694 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.5e-31 139.4 167 46.7
FAN18G3004 Fragaria x ananassa HOM05D003861 ORTHO05D003172 4.3e-31 138.7 74 86.5
FAN26G3319 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.8e-30 136.0 98 70.4
FvH4_5g34730 Fragaria vesca HOM05D003861 ORTHO05D003172 6.3e-30 134.8 168 42.9
FvH4_4g14180 Fragaria vesca HOM05D003861 ORTHO05D003172 4.1e-29 132.1 63 93.7
FAN10G4063 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.2e-28 130.6 63 92.1
FvH4_7g00330 Fragaria vesca HOM05D003861 ORTHO05D003172 2.6e-28 129.4 160 41.2
FAN20G0509 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.9e-27 125.9 63 90.5
FAN14G1188 Fragaria x ananassa HOM05D003861 ORTHO05D003172 6.5e-27 124.8 168 41.7
FvH4_6g38832 Fragaria vesca HOM05D003861 ORTHO05D003172 1.1e-26 124.0 168 42.9
FAN12G1269 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.5e-26 122.9 160 46.2
FAN05G1504 Fragaria x ananassa HOM05D003861 ORTHO05D003172 4.2e-26 122.1 63 87.3
FAN18G1278 Fragaria x ananassa HOM05D003861 ORTHO05D003172 5.5e-26 121.7 158 41.8
FAN01G2695 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.3e-24 117.1 161 45.3
FAN10G2421 Fragaria x ananassa HOM05D003861 ORTHO05D003172 3.0e-24 115.9 161 44.7
FAN18G3027 Fragaria x ananassa HOM05D003861 ORTHO05D003172 3.9e-24 115.5 168 39.9
FvH4_4g12252 Fragaria vesca HOM05D003861 ORTHO05D003172 4.8e-22 108.6 172 37.2
FAN02G1809 Fragaria x ananassa HOM05D003861 ORTHO05D003172 4.8e-22 108.6 170 37.6
FAN03G2787 Fragaria x ananassa HOM05D003861 ORTHO05D003172 4.8e-22 108.6 170 37.6
FAN09G4482 Fragaria x ananassa HOM05D003861 ORTHO05D003172 4.8e-22 108.6 170 37.6
FAN14G4213 Fragaria x ananassa HOM05D003861 ORTHO05D003172 4.8e-22 108.6 170 37.6
FAN22G0249 Fragaria x ananassa HOM05D003861 ORTHO05D003172 4.8e-22 108.6 170 37.6
FAN16G2032 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.4e-21 107.1 167 37.1
FAN10G0202 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.8e-21 106.7 169 37.3
FAN12G4080 Fragaria x ananassa HOM05D003861 ORTHO05D003172 3.1e-21 105.9 170 37.1
FAN12G3947 Fragaria x ananassa HOM05D003861 ORTHO05D003172 4.1e-21 105.5 170 37.1
FAN06G0363 Fragaria x ananassa HOM05D003861 ORTHO05D003172 9.1e-21 104.4 126 41.3
FvH4_1g04631 Fragaria vesca HOM05D003861 ORTHO05D003172 1.2e-20 104.0 167 37.1
FvH4_1g14871 Fragaria vesca HOM05D003861 ORTHO05D003172 1.2e-20 104.0 170 37.1
FAN15G1075 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.5e-20 103.6 162 37.0
FAN15G3220 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.0e-20 103.2 146 40.4
FAN21G2358 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.6e-20 102.8 130 40.8
FAN05G1658 Fragaria x ananassa HOM05D003861 ORTHO05D003172 3.4e-20 102.4 153 42.5
FAN05G5569 Fragaria x ananassa HOM05D003861 ORTHO05D003172 3.4e-20 102.4 153 42.5
FvH4_5g21900 Fragaria vesca HOM05D003861 ORTHO05D003172 5.9e-20 101.7 126 42.1
FAN07G1189 Fragaria x ananassa HOM05D003861 ORTHO05D003172 7.7e-20 101.3 160 38.1
FAN04G1565 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.3e-19 100.5 168 36.3
FAN27G0961 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.2e-19 99.8 162 37.0
FAN06G0466 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.9e-19 99.4 158 37.3
FAN23G2374 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.9e-19 99.4 158 37.3
FAN24G1232 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.9e-19 99.4 158 37.3
FAN26G1201 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.9e-19 99.4 158 37.3
FAN26G2443 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.9e-19 99.4 158 37.3
FAN11G3742 Fragaria x ananassa HOM05D003861 ORTHO05D003172 3.8e-19 99.0 130 39.2
FAN03G0767 Fragaria x ananassa HOM05D003861 ORTHO05D003172 6.5e-19 98.2 158 37.3
FAN03G0943 Fragaria x ananassa HOM05D008328 ORTHO05D003172 6.5e-19 98.2 170 36.5
FAN14G4127 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.4e-18 97.1 172 35.5
FAN18G3316 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.4e-18 97.1 63 73.0
FAN02G3772 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.9e-18 96.7 172 35.5
FAN04G2765 Fragaria x ananassa HOM05D008328 ORTHO05D003172 5.5e-18 95.1 170 35.9
FAN05G3353 Fragaria x ananassa HOM05D008328 ORTHO05D003172 5.5e-18 95.1 170 35.9
FAN10G4036 Fragaria x ananassa HOM05D008328 ORTHO05D003172 5.5e-18 95.1 170 35.9
FAN14G0103 Fragaria x ananassa HOM05D008328 ORTHO05D003172 5.5e-18 95.1 170 35.9
FAN15G3561 Fragaria x ananassa HOM05D008328 ORTHO05D003172 5.5e-18 95.1 170 35.9
FAN09G0970 Fragaria x ananassa HOM05D008328 ORTHO05D003172 7.2e-18 94.7 170 35.9
FAN11G1400 Fragaria x ananassa HOM05D008328 ORTHO05D003172 7.2e-18 94.7 173 35.3
FAN14G4484 Fragaria x ananassa HOM05D008328 ORTHO05D003172 7.2e-18 94.7 170 35.9
FAN20G1987 Fragaria x ananassa HOM05D003861 ORTHO05D003172 9.4e-18 94.4 127 38.6
FAN07G1974 Fragaria x ananassa HOM05D008328 ORTHO05D003172 1.2e-17 94.0 170 34.7
FAN19G2410 Fragaria x ananassa HOM05D008328 ORTHO05D003172 1.2e-17 94.0 170 35.9
FAN27G0540 Fragaria x ananassa HOM05D008328 ORTHO05D003172 1.2e-17 94.0 170 35.3
FAN04G1029 Fragaria x ananassa HOM05D008328 ORTHO05D003172 1.6e-17 93.6 170 35.3
FAN17G2131 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.6e-17 93.6 158 36.1
FAN03G1903 Fragaria x ananassa HOM05D008328 ORTHO05D003172 2.7e-17 92.8 170 35.3
FAN05G4779 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.7e-17 92.8 172 34.9
FAN09G2774 Fragaria x ananassa HOM05D008328 ORTHO05D003172 2.7e-17 92.8 170 35.3
FAN04G2813 Fragaria x ananassa HOM05D008328 ORTHO05D003172 3.6e-17 92.4 170 35.3
FAN26G1802 Fragaria x ananassa HOM05D003861 ORTHO05D003172 4.7e-17 92.0 165 35.2
FAN19G2996 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.0e-16 90.9 128 37.5
FAN05G0284 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.4e-16 90.5 124 38.7
FAN08G1451 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.8e-16 90.1 132 40.2
RcHm_v2.0_Chr7g0200361 Rosa chinensis HOM05D003861 ORTHO05D003172 1.8e-16 90.1 169 36.1
FAN04G0487 Fragaria x ananassa HOM05D008328 ORTHO05D003172 2.3e-16 89.7 176 34.7
FAN06G3254 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.3e-16 89.7 168 35.1
FAN27G1601 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.3e-16 89.7 107 44.9
FAN08G2583 Fragaria x ananassa HOM05D003861 ORTHO05D003172 3.0e-16 89.4 189 32.3
FAN14G1330 Fragaria x ananassa HOM05D008328 ORTHO05D003172 3.0e-16 89.4 170 35.9
FAN19G2630 Fragaria x ananassa HOM05D008328 ORTHO05D003172 3.0e-16 89.4 170 35.9
FAN15G1570 Fragaria x ananassa HOM05D008328 ORTHO05D003172 6.7e-16 88.2 126 38.9
RcHm_v2.0_Chr1g0362621 Rosa chinensis HOM05D000234 ORTHO05D000335 6.7e-16 88.2 72 55.6
FAN08G2861 Fragaria x ananassa HOM05D008328 ORTHO05D003172 3.3e-15 85.9 174 32.2
FvH4_7g08131 Fragaria vesca HOM05D003861 ORTHO05D003172 9.7e-15 84.3 49 77.6
DCAR_010251 Daucus carota HOM05D003861 ORTHO05D003172 1.3e-14 84.0 166 32.5
FAN08G2239 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.7e-14 83.6 132 37.9
FAN08G1145 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.2e-14 83.2 169 33.7
FAN12G1889 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.8e-14 82.8 112 42.0
FAN23G1712 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.8e-14 82.8 129 38.0
FAN18G1703 Fragaria x ananassa HOM05D003861 ORTHO05D003172 3.7e-14 82.4 124 39.5
FAN07G0085 Fragaria x ananassa HOM05D003861 ORTHO05D003172 4.8e-14 82.0 80 45.0
FAN25G0014 Fragaria x ananassa HOM05D003861 ORTHO05D003172 4.1e-13 79.0 160 35.6
FAN06G2450 Fragaria x ananassa HOM05D003861 ORTHO05D003172 5.9e-12 75.1 110 39.1
FvH4_5g15962 Fragaria vesca HOM05D003861 ORTHO05D003172 3.8e-11 72.4 167 32.3
FAN17G2808 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.5e-10 69.7 97 36.1
FAN23G2667 Fragaria x ananassa HOM05D003861 ORTHO05D003172 3.2e-10 69.3 92 38.0
FAN05G2377 Fragaria x ananassa HOM05D008328 ORTHO05D003172 9.4e-10 67.8 135 34.8
FvH4_3g18183 Fragaria vesca HOM05D003861 ORTHO05D003172 2.1e-09 66.6 93 37.6
FAN16G3351 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.7e-09 66.2 98 35.7
FAN07G1005 Fragaria x ananassa HOM05D008328 ORTHO05D003172 8.0e-09 64.7 118 35.6
FAN11G2335 Fragaria x ananassa HOM05D000054 ORTHO05D000171 8.0e-09 64.7 89 42.7
FAN13G0199 Fragaria x ananassa HOM05D003861 ORTHO05D003172 8.0e-09 64.7 119 36.1
FAN11G1233 Fragaria x ananassa HOM05D008328 ORTHO05D003172 1.0e-08 64.3 118 35.6
FAN13G3107 Fragaria x ananassa HOM05D008328 ORTHO05D003172 1.0e-08 64.3 118 35.6
FAN14G4747 Fragaria x ananassa HOM05D008328 ORTHO05D003172 1.0e-08 64.3 118 35.6
FAN04G1737 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.4e-08 63.9 164 29.3
FAN11G1968 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.4e-08 63.9 93 35.5
FAN14G4695 Fragaria x ananassa HOM05D008328 ORTHO05D003172 1.4e-08 63.9 118 35.6
RcHm_v2.0_Chr6g0254691 Rosa chinensis HOM05D006804 ORTHO05D009450 4.4e-07 58.9 164 28.0
FAN04G1109 Fragaria x ananassa HOM05D008328 ORTHO05D003172 7.4e-07 58.2 118 33.9
FAN09G3543 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.2e-06 56.6 78 34.6
FAN09G4270 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.2e-06 56.6 78 34.6
FAN10G3556 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.8e-06 56.2 72 43.1
FAN13G1477 Fragaria x ananassa HOM05D006804 ORTHO05D009450 4.8e-06 55.5 169 27.8
FAN13G0814 Fragaria x ananassa HOM05D003861 ORTHO05D003172 8.2e-06 54.7 82 40.2
FAN27G3227 Fragaria x ananassa HOM05D003861 ORTHO05D003172 8.2e-06 54.7 28 89.3


User provided reference genes

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